CmaCh12G000960 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G000960
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCma_Chr12 : 385009 .. 386574 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTCGTCAAATATCGCCATATTATCATCAGTAAGTTCCCATTTAGCTCCATCTTTCACCAACGTTTCAGTTCCTTCACTTCCGATTCCATCAACCCCACGGCGGCGCCACCGACCTCCGCCTCCCACAACAACATTGGACTGGCAATTGACCCGACACACCTCCGCCGCGTCTGTACCGTTCTATATCAGCAGCAGAACTCCTCCGATCTCAGGCTTCACTCCAAACTTCGCGCCTGTAGTTTCAACCTCTCGCACGAATTCTTCCTCCAGGTCTGCAACACATTCCCTTTCTCATGGCGACCCGTTTATCGCTTCTTCCAATTCACCGAAACCGACCCGAATTTCACTCACACGGCGGTCTCTTTCAACAAGATGATTGATATTGTTGGAAAATCTCGAAATATCGATCTCTTGTGGGATTTGATTCAGGAAATGGGACGGCGGCGTTTGGTGACGGATAAGACCTTTGTTGTTGCTCTGAGAACGCTGGCGGCGGCAAGGGAATTGAAGAAATGTGTGGAGCTTTTCCATTTGATGAATGGATATGGATTTGGTTATAGCTTAGTGAGTTTGAACAAAGTAGTTGAGAAATTGTGTGGCTGTAAACTTGCGGATGAGGCTAAGTTTCTGGTTTTGAAATTGAAGGAATGGATCAAGGCTGATGGGGTTACTTACAAGTTATTGATTAAGGGATTTTGCGATGTGGGAGATGTGATTGAAGCTTCAAAGATTTGGAACTTAATGGTGGAAGAAGGGTTCGAGGCTGAAATGGAAGCTGTGGAGGAGATGATGAATGTTCTTTTCAAGGCCAACAAATTGGATGAAGCTTTGAAACTTTTTCAGGCAATGAGATCAAACAGGATGAATGATTTGATTCCTCCAACTTATAGTCTTGTGATTAAATGGTTATGCAACAAAGGCAAGACGAGGCAGGCCTATAATGTGTTCGACGAAATGCTTAAGAGAGGGTTTGAAGCTGATAATTCAGCACATTCTTCACTAATCTATGGGGTTTTAGCTAGAGGGAGGAGGAGGGAAGCTTATAACATAATGGGAAGAATTGAGAAGCCTGATTTGAGTGTTTATCATGCTATGATTAAGGGGCTTTTGAGGCTGCGAAGGGCAAGTGAAGCGACACAAGTTTTTCGGGAAATGATTGAAAGAGGGTGTGAGCCTATAATGCATACATATGTAATGTTGTTGCAAGGACATCTAGGGAGAAGGGGGAGGAAGGGATTGGATCCATTGGTGAATTTTGATACCATTTTTGTTGGAGGTTTGGTGAAGTTTGGGAAGTCATTGGAGGCCACAAAGTATGTGGAGAGAGTGATGAAAAGAGGGCTTGAAGTGCCAAGGTTTGATTACAACAAGTTTTTGCATTACTATTCGAATGAGGAGGGAGTGGTAATGTTTAGAGAGGTGGGGAATAGGTTGAGAGAAGTTGGGTTGGTTGATTTGGCTGATATATTTCAGAGGTATGGGGAGAAAATGACCACTAGAGATAGGAGGAGAGATCGAGCAACGGTGTCGTCGAGCAAGATACCGGCTGTGTCGGGTTGA

mRNA sequence

ATGGCAGTCGTCAAATATCGCCATATTATCATCAGTAAGTTCCCATTTAGCTCCATCTTTCACCAACGTTTCAGTTCCTTCACTTCCGATTCCATCAACCCCACGGCGGCGCCACCGACCTCCGCCTCCCACAACAACATTGGACTGGCAATTGACCCGACACACCTCCGCCGCGTCTGTACCGTTCTATATCAGCAGCAGAACTCCTCCGATCTCAGGCTTCACTCCAAACTTCGCGCCTGTAGTTTCAACCTCTCGCACGAATTCTTCCTCCAGGTCTGCAACACATTCCCTTTCTCATGGCGACCCGTTTATCGCTTCTTCCAATTCACCGAAACCGACCCGAATTTCACTCACACGGCGGTCTCTTTCAACAAGATGATTGATATTGTTGGAAAATCTCGAAATATCGATCTCTTGTGGGATTTGATTCAGGAAATGGGACGGCGGCGTTTGGTGACGGATAAGACCTTTGTTGTTGCTCTGAGAACGCTGGCGGCGGCAAGGGAATTGAAGAAATGTGTGGAGCTTTTCCATTTGATGAATGGATATGGATTTGGTTATAGCTTAGTGAGTTTGAACAAAGTAGTTGAGAAATTGTGTGGCTGTAAACTTGCGGATGAGGCTAAGTTTCTGGTTTTGAAATTGAAGGAATGGATCAAGGCTGATGGGGTTACTTACAAGTTATTGATTAAGGGATTTTGCGATGTGGGAGATGTGATTGAAGCTTCAAAGATTTGGAACTTAATGGTGGAAGAAGGGTTCGAGGCTGAAATGGAAGCTGTGGAGGAGATGATGAATGTTCTTTTCAAGGCCAACAAATTGGATGAAGCTTTGAAACTTTTTCAGGCAATGAGATCAAACAGGATGAATGATTTGATTCCTCCAACTTATAGTCTTGTGATTAAATGGTTATGCAACAAAGGCAAGACGAGGCAGGCCTATAATGTGTTCGACGAAATGCTTAAGAGAGGGTTTGAAGCTGATAATTCAGCACATTCTTCACTAATCTATGGGGTTTTAGCTAGAGGGAGGAGGAGGGAAGCTTATAACATAATGGGAAGAATTGAGAAGCCTGATTTGAGTGTTTATCATGCTATGATTAAGGGGCTTTTGAGGCTGCGAAGGGCAAGTGAAGCGACACAAGTTTTTCGGGAAATGATTGAAAGAGGGTGTGAGCCTATAATGCATACATATGTAATGTTGTTGCAAGGACATCTAGGGAGAAGGGGGAGGAAGGGATTGGATCCATTGGTGAATTTTGATACCATTTTTGTTGGAGGTTTGGTGAAGTTTGGGAAGTCATTGGAGGCCACAAAGTATGTGGAGAGAGTGATGAAAAGAGGGCTTGAAGTGCCAAGGTTTGATTACAACAAGTTTTTGCATTACTATTCGAATGAGGAGGGAGTGGTAATGTTTAGAGAGGTGGGGAATAGGTTGAGAGAAGTTGGGTTGGTTGATTTGGCTGATATATTTCAGAGGTATGGGGAGAAAATGACCACTAGAGATAGGAGGAGAGATCGAGCAACGGTGTCGTCGAGCAAGATACCGGCTGTGTCGGGTTGA

Coding sequence (CDS)

ATGGCAGTCGTCAAATATCGCCATATTATCATCAGTAAGTTCCCATTTAGCTCCATCTTTCACCAACGTTTCAGTTCCTTCACTTCCGATTCCATCAACCCCACGGCGGCGCCACCGACCTCCGCCTCCCACAACAACATTGGACTGGCAATTGACCCGACACACCTCCGCCGCGTCTGTACCGTTCTATATCAGCAGCAGAACTCCTCCGATCTCAGGCTTCACTCCAAACTTCGCGCCTGTAGTTTCAACCTCTCGCACGAATTCTTCCTCCAGGTCTGCAACACATTCCCTTTCTCATGGCGACCCGTTTATCGCTTCTTCCAATTCACCGAAACCGACCCGAATTTCACTCACACGGCGGTCTCTTTCAACAAGATGATTGATATTGTTGGAAAATCTCGAAATATCGATCTCTTGTGGGATTTGATTCAGGAAATGGGACGGCGGCGTTTGGTGACGGATAAGACCTTTGTTGTTGCTCTGAGAACGCTGGCGGCGGCAAGGGAATTGAAGAAATGTGTGGAGCTTTTCCATTTGATGAATGGATATGGATTTGGTTATAGCTTAGTGAGTTTGAACAAAGTAGTTGAGAAATTGTGTGGCTGTAAACTTGCGGATGAGGCTAAGTTTCTGGTTTTGAAATTGAAGGAATGGATCAAGGCTGATGGGGTTACTTACAAGTTATTGATTAAGGGATTTTGCGATGTGGGAGATGTGATTGAAGCTTCAAAGATTTGGAACTTAATGGTGGAAGAAGGGTTCGAGGCTGAAATGGAAGCTGTGGAGGAGATGATGAATGTTCTTTTCAAGGCCAACAAATTGGATGAAGCTTTGAAACTTTTTCAGGCAATGAGATCAAACAGGATGAATGATTTGATTCCTCCAACTTATAGTCTTGTGATTAAATGGTTATGCAACAAAGGCAAGACGAGGCAGGCCTATAATGTGTTCGACGAAATGCTTAAGAGAGGGTTTGAAGCTGATAATTCAGCACATTCTTCACTAATCTATGGGGTTTTAGCTAGAGGGAGGAGGAGGGAAGCTTATAACATAATGGGAAGAATTGAGAAGCCTGATTTGAGTGTTTATCATGCTATGATTAAGGGGCTTTTGAGGCTGCGAAGGGCAAGTGAAGCGACACAAGTTTTTCGGGAAATGATTGAAAGAGGGTGTGAGCCTATAATGCATACATATGTAATGTTGTTGCAAGGACATCTAGGGAGAAGGGGGAGGAAGGGATTGGATCCATTGGTGAATTTTGATACCATTTTTGTTGGAGGTTTGGTGAAGTTTGGGAAGTCATTGGAGGCCACAAAGTATGTGGAGAGAGTGATGAAAAGAGGGCTTGAAGTGCCAAGGTTTGATTACAACAAGTTTTTGCATTACTATTCGAATGAGGAGGGAGTGGTAATGTTTAGAGAGGTGGGGAATAGGTTGAGAGAAGTTGGGTTGGTTGATTTGGCTGATATATTTCAGAGGTATGGGGAGAAAATGACCACTAGAGATAGGAGGAGAGATCGAGCAACGGTGTCGTCGAGCAAGATACCGGCTGTGTCGGGTTGA

Protein sequence

MAVVKYRHIIISKFPFSSIFHQRFSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRRDRATVSSSKIPAVSG
Homology
[Close]
BLAST of CmaCh12G000960 vs. Swiss-Prot
Match: PPR59_ARATH (Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana GN=At1g26500 PE=3 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 5.8e-174
Identity = 296/483 (61.28%), Postives = 374/483 (77.43%), Query Frame = 1 

Query: 27  FTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLS 86
           F S  + PT   P           I+  HL RVCT+LYQQQNS D RL SKL +  F L+
Sbjct: 28  FFSTELTPTTITP-----------INQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLT 87

Query: 87  HEFFLQVCNTFPFSWRPVYRFFQFTETD-PNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQ 146
           HEFFLQVCN FP SWRPV+RFF +++T  P+FTHT+ + NKM+ I+G SRN+DL W+L Q
Sbjct: 88  HEFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQ 147

Query: 147 EMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKL 206
           E+G+R LV DKTF + L+TLA+ARELKKCV  FHLMNG+G+ Y++ ++N+ VE LC  KL
Sbjct: 148 EIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKL 207

Query: 207 ADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEM 266
            +EAKF+ +KLKE+IK D +TY+ +I+GFCDVGD+IEA+K+WNLM++EGF+ ++EA +++
Sbjct: 208 VEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKI 267

Query: 267 MNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRG 326
           M  L K N+ DEA K+F  M S R  DL    Y ++I WLC  G+   A  VFDEM +RG
Sbjct: 268 METLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERG 327

Query: 327 FEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFR 386
              DN   +SLIYG+L + R  EAY ++  +E PD+S+YH +IKGL++++RASEAT+VFR
Sbjct: 328 VYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFR 387

Query: 387 EMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERV 446
           +MI+RGCEPIMHTY+MLLQGHLGRRGRKG DPLVNFDTIFVGG++K GK LE TKY+ER 
Sbjct: 388 KMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERT 447

Query: 447 MKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRR 506
           +KRGLEVPRFDY+KFLHYYSNEEGVVMF E+  +LREV L DLADIFQRYGEKMTTR+RR
Sbjct: 448 LKRGLEVPRFDYSKFLHYYSNEEGVVMFEEMAKKLREVSLFDLADIFQRYGEKMTTRERR 499

Query: 507 RDR 509
           RDR
Sbjct: 508 RDR 499

[Close]
BLAST of CmaCh12G000960 vs. Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.9e-64
Identity = 138/471 (29.30%), Postives = 256/471 (54.35%), Query Frame = 1 

Query: 52  DPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFT 111
           +P  + RVC V+  +  + D  + + L     +LSH+  ++V   F  + +P +RFF + 
Sbjct: 127 NPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWA 186

Query: 112 ETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAREL 171
                F H + ++N M+ I+ K+R  + +  +++EMG + L+T +TF +A++  AAA+E 
Sbjct: 187 AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER 246

Query: 172 KKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLI 231
           KK V +F LM  Y F   + ++N +++ L   KL  EA+ L  KLKE    + +TY +L+
Sbjct: 247 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 306

Query: 232 KGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMN 291
            G+C V ++IEA++IWN M+++G + ++ A   M+  L ++ K  +A+KLF  M+S    
Sbjct: 307 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 366

Query: 292 DLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYN 351
             +  +Y+++I+  C +     A   FD+M+  G + D + ++ LI G   + +    Y 
Sbjct: 367 PNV-RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 426

Query: 352 IMGRIEK----PDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHL 411
           ++  +++    PD   Y+A+IK +   +    AT+++ +MI+   EP +HT+ M+++ + 
Sbjct: 427 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYF 486

Query: 412 GRRG------------RKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRF 471
             R             +KG+ P  N  T+ + GL+  GKS EA +Y+E ++ +G++ P  
Sbjct: 487 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 546

Query: 472 DYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 507
           DYNKF   +       +F E+  R +  G    A+IF R+ +    R ++R
Sbjct: 547 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

[Close]
BLAST of CmaCh12G000960 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.9e-63
Identity = 137/471 (29.09%), Postives = 254/471 (53.93%), Query Frame = 1 

Query: 52  DPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFT 111
           +P  + RVC V+  +  + D  + + L     +LSH+  ++V   F  + +P +RFF + 
Sbjct: 127 NPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWA 186

Query: 112 ETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAREL 171
                F H + ++N M+ I+ K+R  + +  +++EMG + L+T +TF +A++  AAA+E 
Sbjct: 187 AERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER 246

Query: 172 KKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLI 231
           KK V +F LM  Y F   + ++N +++ L   KL  EA+ L  KLKE    + +TY +L+
Sbjct: 247 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 306

Query: 232 KGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMN 291
            G+C V ++IEA++IWN M++ G + ++ A   M+  L ++ K  +A+KLF  M+S    
Sbjct: 307 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 366

Query: 292 DLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYN 351
             +  +Y+++I+  C +     A   FD+M+  G + D + ++ LI G   + +    Y 
Sbjct: 367 PNV-RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 426

Query: 352 IMGRIEK----PDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHL 411
           ++  +++    PD   Y+A+IK +   +     T+++ +MI+   EP +HT+ M+++ + 
Sbjct: 427 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 486

Query: 412 GRRG------------RKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRF 471
             R             +KG+ P  N  T+ + GL+  GKS EA +Y+E ++ +G++ P  
Sbjct: 487 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 546

Query: 472 DYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 507
           DYNKF   +       +F E+  R +  G    A+IF R+ +    R ++R
Sbjct: 547 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

[Close]
BLAST of CmaCh12G000960 vs. Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.4e-63
Identity = 137/471 (29.09%), Postives = 254/471 (53.93%), Query Frame = 1 

Query: 52  DPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFT 111
           +P  + RVC V+  +  + D  + + L     +LSH+  ++V   F  + +P +RFF + 
Sbjct: 126 NPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWA 185

Query: 112 ETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAREL 171
                F H + ++N M+ I+ K+R  + +  +++EMG + L+T +TF +A++  AAA+E 
Sbjct: 186 AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER 245

Query: 172 KKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLI 231
           KK V +F LM  Y F   + ++N +++ L   KL  EA+ L  KLKE    + +TY +L+
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305

Query: 232 KGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMN 291
            G+C V ++IEA++IWN M++ G + ++ A   M+  L ++ K  +A+KLF  M+S    
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365

Query: 292 DLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYN 351
             +  +Y+++I+  C +     A   FD+M+  G + D + ++ LI G   + +    Y 
Sbjct: 366 PNV-RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 425

Query: 352 IMGRIEK----PDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHL 411
           ++  +++    PD   Y+A+IK +   +     T+++ +MI+   EP +HT+ M+++ + 
Sbjct: 426 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 485

Query: 412 GRRG------------RKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRF 471
             R             +KG+ P  N  T+ + GL+  GKS EA +Y+E ++ +G++ P  
Sbjct: 486 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 545

Query: 472 DYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 507
           DYNKF   +       +F E+  R +  G    A+IF R+ +    R ++R
Sbjct: 546 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

[Close]
BLAST of CmaCh12G000960 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 3.6e-35
Identity = 100/420 (23.81%), Postives = 208/420 (49.52%), Query Frame = 1 

Query: 68  NSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHTAVSFNKM 127
           +S  L L S L      +S E    V N F  +    YRFFQ++E   ++ H+  +++ M
Sbjct: 81  SSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMM 140

Query: 128 IDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFG 187
           I+   K R   L+WDLI  M +++++  +TF + +R  A A+++ + +  F++M  Y   
Sbjct: 141 IESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLP 200

Query: 188 YSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIW 247
            +LV+ N ++  LC  K   +A+ +   +++    D  TY +L++G+    ++ +A +++
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 260

Query: 248 NLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPT---YSLVIKW 307
             M++ G   ++     M+++L KA ++DEAL + ++M  +    +  PT   YS+++  
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS----ICKPTTFIYSVLVHT 320

Query: 308 LCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEK----PD 367
              + +  +A + F EM + G +AD +  +SLI       R +  Y ++  ++     P+
Sbjct: 321 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 380

Query: 368 LSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRR---------- 427
               + +++ L+      EA  VFR+MI + CEP   TY M+++    ++          
Sbjct: 381 SKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWK 440

Query: 428 --GRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEE 469
              +KG+ P ++  ++ + GL +   + +A   +E +++ G+      + +       EE
Sbjct: 441 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495

[Close]
BLAST of CmaCh12G000960 vs. TrEMBL
Match: A0A0A0KD74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366430 PE=4 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 2.5e-248
Identity = 430/509 (84.48%), Postives = 460/509 (90.37%), Query Frame = 1 

Query: 1   MAVVKYRHIIISKFPFSSIFHQRFSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVC 60
           MA + YR III+ F FS IFHQRFS FTSDS         S + +NI   ID THLRRVC
Sbjct: 1   MAAITYRRIIINNFSFSFIFHQRFSPFTSDS---------STAADNIPQPIDSTHLRRVC 60

Query: 61  TVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHT 120
           TVLYQQQNS DL+LH+KL AC+FNLSHEFFLQVCNTFP SWRPVYRFFQFTET PNFTHT
Sbjct: 61  TVLYQQQNSPDLKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRFFQFTETHPNFTHT 120

Query: 121 AVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHL 180
           AVSFNK+ID+VGKSRNIDLLW LIQEMGRRRLV DKTFVVALRTLA ARELKKCVE FHL
Sbjct: 121 AVSFNKLIDVVGKSRNIDLLWGLIQEMGRRRLVNDKTFVVALRTLATARELKKCVEFFHL 180

Query: 181 MNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDV 240
           MNGYGF YSLV+LN+VVEKLCGCKL DEAKFLV+KL EWIKADGVTYKLLIKGFC+VGD+
Sbjct: 181 MNGYGFCYSLVTLNRVVEKLCGCKLVDEAKFLVMKLNEWIKADGVTYKLLIKGFCNVGDL 240

Query: 241 IEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSL 300
           IEASK+WNLMV+EGFE EMEAVEEMMNVLFK NKLDEALKLFQA+RS+RMNDLIP TYSL
Sbjct: 241 IEASKMWNLMVDEGFEPEMEAVEEMMNVLFKTNKLDEALKLFQALRSDRMNDLIPSTYSL 300

Query: 301 VIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPD 360
           VI+WLCNKGK  QA+ VFDEM KRG E DNS HSSLIYG+LARGRRREAYNIM RIE PD
Sbjct: 301 VIRWLCNKGKVGQAFIVFDEMHKRGLEVDNSVHSSLIYGLLARGRRREAYNIMRRIENPD 360

Query: 361 LSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVN 420
           L VYHA IKGLL+L+RA+EATQVFREMIERGCEPIMHTY+MLLQGHLG+RGRKG DPLVN
Sbjct: 361 LDVYHAFIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQGHLGKRGRKGSDPLVN 420

Query: 421 FDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRL 480
           FD+IFVGGLVK GKSLEATKYVER+MKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGN+L
Sbjct: 421 FDSIFVGGLVKNGKSLEATKYVERLMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNKL 480

Query: 481 REVGLVDLADIFQRYGEKMTTRDRRRDRA 510
           REVGLVDLADIFQRYGEKMTTRDRRR+RA
Sbjct: 481 REVGLVDLADIFQRYGEKMTTRDRRRNRA 500

[Close]
BLAST of CmaCh12G000960 vs. TrEMBL
Match: M5Y2L9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015711mg PE=4 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 4.4e-197
Identity = 334/458 (72.93%), Postives = 390/458 (85.15%), Query Frame = 1 

Query: 51  IDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQF 110
           ++P HL RVCT+LYQQQNS + RLHS L + +F L+HEFFLQVCN+FP SWRPVY FF +
Sbjct: 9   VNPAHLLRVCTILYQQQNSPESRLHSNLNSSNFQLTHEFFLQVCNSFPLSWRPVYLFFLY 68

Query: 111 TETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARE 170
           T+T PNFTHT VSFNKM+D++GK+RNI LLWD++ EMGRRRLV DKTF++AL+TLA ARE
Sbjct: 69  TQTHPNFTHTTVSFNKMVDVIGKARNIQLLWDMLHEMGRRRLVNDKTFLIALKTLAKARE 128

Query: 171 LKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLL 230
           L KCVE FH+MNGYGF YSL +LNKVVE LCG KL  EAKF+V KLKE I  +GVTY+ L
Sbjct: 129 LNKCVEFFHVMNGYGFDYSLETLNKVVESLCGSKLVVEAKFIVFKLKESIGPNGVTYRCL 188

Query: 231 IKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRM 290
           I+GFCDVGD+IEASKIWNLMV+EGF+ ++ A+E+MM  LFK N+  EALK+FQ MR NRM
Sbjct: 189 IEGFCDVGDLIEASKIWNLMVDEGFDPDIGAIEKMMETLFKTNRYGEALKVFQMMRVNRM 248

Query: 291 NDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAY 350
           +DL   TY LVI+W+C  GK  +A+ VF+EM KR  EADNS  +SL+YG+LARGR R AY
Sbjct: 249 DDLGLSTYRLVIEWMCKSGKIEEAHVVFEEMQKRRIEADNSTLASLVYGLLARGRVRVAY 308

Query: 351 NIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRR 410
            I+  IEKPD++V+H MIKGLLRLR+  EAT+VFREMI++GCEP MHTY+MLLQGHLG+R
Sbjct: 309 KIVEGIEKPDINVFHGMIKGLLRLRKLREATEVFREMIKKGCEPNMHTYIMLLQGHLGKR 368

Query: 411 GRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGV 470
           GRKG DPLVNFDTIFVGGLVK GKSLEATKYVERV+KRGLEVPRFDYNKFLHYYSNEEGV
Sbjct: 369 GRKGSDPLVNFDTIFVGGLVKAGKSLEATKYVERVIKRGLEVPRFDYNKFLHYYSNEEGV 428

Query: 471 VMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRRDR 509
            MF EVG +LREVGLVDLADIFQRYGEKM TRDRRR+R
Sbjct: 429 GMFEEVGKKLREVGLVDLADIFQRYGEKMATRDRRRNR 466

[Close]
BLAST of CmaCh12G000960 vs. TrEMBL
Match: A0A067KYM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15698 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 8.9e-190
Identity = 332/498 (66.67%), Postives = 394/498 (79.12%), Query Frame = 1 

Query: 17  SSIFHQR---FSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLR 76
           +S +HQ    F   T+ SI P  +PP           + P +L RVCT+LYQQQNS D +
Sbjct: 14  NSFYHQPRQLFRLLTTASIQPQPSPPCP---------VKPDYLLRVCTILYQQQNSPDSK 73

Query: 77  LHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPN--FTHTAVSFNKMIDIV 136
           L+SKL +C+F+L+HEFFLQVCN FP+SWRPVYRFFQ+T   PN  F HT++SFNKM+D++
Sbjct: 74  LYSKLSSCNFHLTHEFFLQVCNKFPYSWRPVYRFFQYTRQTPNALFAHTSISFNKMLDVI 133

Query: 137 GKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLV 196
           GKSRNI+L WD IQEM +  LV DKTF++AL+TL  ARELKKCVE FHLMN YG+ Y + 
Sbjct: 134 GKSRNINLFWDTIQEMAKIGLVNDKTFIIALKTLGLARELKKCVEFFHLMNSYGYEYRVE 193

Query: 197 SLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMV 256
            LNKVVE LC  KL +EAKF+VLKLKEWIKA+ +TY  L+ GFCD+GD+IEASKIWNLMV
Sbjct: 194 RLNKVVESLCKDKLVEEAKFVVLKLKEWIKANEITYGWLVIGFCDMGDMIEASKIWNLMV 253

Query: 257 EEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKT 316
           +EGFE  +   E+M+   FK N+ +EA+KLFQ MR  +M+DL   TY LVI W+C +GK 
Sbjct: 254 DEGFEPGIHVYEKMIETFFKRNEYNEAVKLFQTMRVKKMDDLGLSTYRLVIDWMCKRGKI 313

Query: 317 RQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGL 376
            QA  +FDEM KRG EADN    SLIYG+LARGR  EAY ++  IEKPD+SVYH MIKGL
Sbjct: 314 SQAKMMFDEMSKRGIEADNLTLGSLIYGLLARGRVNEAYKVVETIEKPDISVYHGMIKGL 373

Query: 377 LRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVK 436
           LRLR+ASEATQVFREMI+RGCEP MHTYVMLLQGHLG+RGRKG DPLVNFDTIFVGGLVK
Sbjct: 374 LRLRKASEATQVFREMIKRGCEPTMHTYVMLLQGHLGKRGRKGKDPLVNFDTIFVGGLVK 433

Query: 437 FGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADI 496
            GKSLEAT+YVER +  GLEVPRFDYNKFLHYYS+EEG V+F E+G +LRE GLVDLADI
Sbjct: 434 AGKSLEATQYVERTINGGLEVPRFDYNKFLHYYSSEEGGVIFEEMGKKLREAGLVDLADI 493

Query: 497 FQRYGEKMTTRDRRRDRA 510
            +RYGEKMTTR+RRR+RA
Sbjct: 494 LERYGEKMTTRERRRNRA 502

[Close]
BLAST of CmaCh12G000960 vs. TrEMBL
Match: F6HFU4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00520 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 1.3e-188
Identity = 321/482 (66.60%), Postives = 389/482 (80.71%), Query Frame = 1 

Query: 27  FTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLS 86
           F   ++ P    P      +I   ++P HL RVCTVLYQQQNS ++RL + LRAC F+L+
Sbjct: 15  FNQLNVRPLTTLPQLPQPTSI---VNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLT 74

Query: 87  HEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQE 146
           HEFFLQVCN FP SWRPVY+FF+FTET P F H +V+FNKM+D++G+SRNI L W+++QE
Sbjct: 75  HEFFLQVCNKFPLSWRPVYKFFEFTETQPCFHHNSVTFNKMVDVIGRSRNIKLFWEVLQE 134

Query: 147 MGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLA 206
           MGRRRL  DKTFV+AL+TLA+ RE+KKCVE FHLMN + +GYSL +LNKVVE LC  KLA
Sbjct: 135 MGRRRLANDKTFVIALKTLASIREMKKCVEFFHLMNAHEYGYSLETLNKVVEVLCRSKLA 194

Query: 207 DEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMM 266
            EAK +VLKLK WI   GVTY  LIKGFC+VGD+IEA+ +W+LMV+EGF   ++AVE+MM
Sbjct: 195 VEAKEIVLKLKTWIPPSGVTYGYLIKGFCEVGDLIEAANVWDLMVDEGFRPGIDAVEKMM 254

Query: 267 NVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGF 326
             LF  N+ DEA+KLFQA+R+ R ++L+  TYSLVI W+C +GK  QAY VF+EMLKRG 
Sbjct: 255 ETLFNINRFDEAMKLFQAVRTTRFDELVLSTYSLVIDWMCKRGKVSQAYMVFEEMLKRGI 314

Query: 327 EADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFRE 386
           + DN   SSLIYG+LA+GR REA  I   IE+PD++VYH +IKGLLRLR+A EATQVFRE
Sbjct: 315 QPDNKTMSSLIYGLLAKGRVREANKITEGIERPDIAVYHGVIKGLLRLRKAGEATQVFRE 374

Query: 387 MIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVM 446
           MI RGCEP MHTY+MLLQGHLG++GRKG  PLVNFD+IFVGGL+K GKSL+A+KYVER+M
Sbjct: 375 MIRRGCEPTMHTYIMLLQGHLGKKGRKGPHPLVNFDSIFVGGLIKVGKSLDASKYVERMM 434

Query: 447 KRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 506
             G+EVPRFDYN+FLH YSNEEGV MF EVG +LREVGLVDLADIF RYGEKM TRDRRR
Sbjct: 435 DGGMEVPRFDYNRFLHCYSNEEGVFMFEEVGKKLREVGLVDLADIFLRYGEKMATRDRRR 493

Query: 507 DR 509
           +R
Sbjct: 495 NR 493

[Close]
BLAST of CmaCh12G000960 vs. TrEMBL
Match: A0A067FSH2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048269mg PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 1.4e-187
Identity = 319/460 (69.35%), Postives = 375/460 (81.52%), Query Frame = 1 

Query: 51  IDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQF 110
           +DP HL RVCT+LYQQQ S + RLHS L +C+FNL+HEFFLQ+CN FP SWRPVY FFQ+
Sbjct: 3   VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62

Query: 111 TE-TDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAR 170
           T+   P F H +++FN+M+DI+GKSRNIDL W+ +QEMGRRRLV DKTF +AL TLA  R
Sbjct: 63  TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122

Query: 171 ELKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKL 230
           ELKK V  FH+MN  G  YSL  LNKVV+ LC  KL  EAK+L+LKL EWIK + + Y  
Sbjct: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182

Query: 231 LIKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNR 290
           LIKG+CDVGD+IEASKIWNLM +EGFE  ++ V++M+   FK NK DEA+K+FQ MR  R
Sbjct: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242

Query: 291 MNDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREA 350
           M+DL   TY +VI W+C +GK  QAY + +EM KRG EADN   SS+IYG+LARGR REA
Sbjct: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302

Query: 351 YNIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGR 410
           Y ++  IEKPD+S+YH +IKGLLRLRRA EATQVFREMI+RGCEP MHTY+MLLQGHLG+
Sbjct: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362

Query: 411 RGRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEG 470
           RGRKG DPLVNFDTIFVGGLVK GKSL+A KYVERVM RG+EVPRFDYNKFLHYYSNEEG
Sbjct: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422

Query: 471 VVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRRDRA 510
           VVMF EVG +LREVGL DLADIFQRYG+KM TR+RRR+RA
Sbjct: 423 VVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRA 462

[Close]
BLAST of CmaCh12G000960 vs. TAIR10
Match: AT1G26500.1 (AT1G26500.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 612.1 bits (1577), Expect = 3.2e-175
Identity = 296/483 (61.28%), Postives = 374/483 (77.43%), Query Frame = 1 

Query: 27  FTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLS 86
           F S  + PT   P           I+  HL RVCT+LYQQQNS D RL SKL +  F L+
Sbjct: 28  FFSTELTPTTITP-----------INQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLT 87

Query: 87  HEFFLQVCNTFPFSWRPVYRFFQFTETD-PNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQ 146
           HEFFLQVCN FP SWRPV+RFF +++T  P+FTHT+ + NKM+ I+G SRN+DL W+L Q
Sbjct: 88  HEFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQ 147

Query: 147 EMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKL 206
           E+G+R LV DKTF + L+TLA+ARELKKCV  FHLMNG+G+ Y++ ++N+ VE LC  KL
Sbjct: 148 EIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKL 207

Query: 207 ADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEM 266
            +EAKF+ +KLKE+IK D +TY+ +I+GFCDVGD+IEA+K+WNLM++EGF+ ++EA +++
Sbjct: 208 VEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKI 267

Query: 267 MNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRG 326
           M  L K N+ DEA K+F  M S R  DL    Y ++I WLC  G+   A  VFDEM +RG
Sbjct: 268 METLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERG 327

Query: 327 FEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFR 386
              DN   +SLIYG+L + R  EAY ++  +E PD+S+YH +IKGL++++RASEAT+VFR
Sbjct: 328 VYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFR 387

Query: 387 EMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERV 446
           +MI+RGCEPIMHTY+MLLQGHLGRRGRKG DPLVNFDTIFVGG++K GK LE TKY+ER 
Sbjct: 388 KMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERT 447

Query: 447 MKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRR 506
           +KRGLEVPRFDY+KFLHYYSNEEGVVMF E+  +LREV L DLADIFQRYGEKMTTR+RR
Sbjct: 448 LKRGLEVPRFDYSKFLHYYSNEEGVVMFEEMAKKLREVSLFDLADIFQRYGEKMTTRERR 499

Query: 507 RDR 509
           RDR
Sbjct: 508 RDR 499

[Close]
BLAST of CmaCh12G000960 vs. TAIR10
Match: AT3G62470.1 (AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 246.9 bits (629), Expect = 2.7e-65
Identity = 138/471 (29.30%), Postives = 256/471 (54.35%), Query Frame = 1 

Query: 52  DPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFT 111
           +P  + RVC V+  +  + D  + + L     +LSH+  ++V   F  + +P +RFF + 
Sbjct: 127 NPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWA 186

Query: 112 ETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAREL 171
                F H + ++N M+ I+ K+R  + +  +++EMG + L+T +TF +A++  AAA+E 
Sbjct: 187 AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER 246

Query: 172 KKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLI 231
           KK V +F LM  Y F   + ++N +++ L   KL  EA+ L  KLKE    + +TY +L+
Sbjct: 247 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 306

Query: 232 KGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMN 291
            G+C V ++IEA++IWN M+++G + ++ A   M+  L ++ K  +A+KLF  M+S    
Sbjct: 307 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 366

Query: 292 DLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYN 351
             +  +Y+++I+  C +     A   FD+M+  G + D + ++ LI G   + +    Y 
Sbjct: 367 PNV-RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 426

Query: 352 IMGRIEK----PDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHL 411
           ++  +++    PD   Y+A+IK +   +    AT+++ +MI+   EP +HT+ M+++ + 
Sbjct: 427 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYF 486

Query: 412 GRRG------------RKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRF 471
             R             +KG+ P  N  T+ + GL+  GKS EA +Y+E ++ +G++ P  
Sbjct: 487 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 546

Query: 472 DYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 507
           DYNKF   +       +F E+  R +  G    A+IF R+ +    R ++R
Sbjct: 547 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

[Close]
BLAST of CmaCh12G000960 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-64
Identity = 137/471 (29.09%), Postives = 254/471 (53.93%), Query Frame = 1 

Query: 52  DPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFT 111
           +P  + RVC V+  +  + D  + + L     +LSH+  ++V   F  + +P +RFF + 
Sbjct: 127 NPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWA 186

Query: 112 ETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAREL 171
                F H + ++N M+ I+ K+R  + +  +++EMG + L+T +TF +A++  AAA+E 
Sbjct: 187 AERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER 246

Query: 172 KKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLI 231
           KK V +F LM  Y F   + ++N +++ L   KL  EA+ L  KLKE    + +TY +L+
Sbjct: 247 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 306

Query: 232 KGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMN 291
            G+C V ++IEA++IWN M++ G + ++ A   M+  L ++ K  +A+KLF  M+S    
Sbjct: 307 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 366

Query: 292 DLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYN 351
             +  +Y+++I+  C +     A   FD+M+  G + D + ++ LI G   + +    Y 
Sbjct: 367 PNV-RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 426

Query: 352 IMGRIEK----PDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHL 411
           ++  +++    PD   Y+A+IK +   +     T+++ +MI+   EP +HT+ M+++ + 
Sbjct: 427 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 486

Query: 412 GRRG------------RKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRF 471
             R             +KG+ P  N  T+ + GL+  GKS EA +Y+E ++ +G++ P  
Sbjct: 487 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 546

Query: 472 DYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 507
           DYNKF   +       +F E+  R +  G    A+IF R+ +    R ++R
Sbjct: 547 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

[Close]
BLAST of CmaCh12G000960 vs. TAIR10
Match: AT5G14820.1 (AT5G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-64
Identity = 137/471 (29.09%), Postives = 254/471 (53.93%), Query Frame = 1 

Query: 52  DPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFT 111
           +P  + RVC V+  +  + D  + + L     +LSH+  ++V   F  + +P +RFF + 
Sbjct: 126 NPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWA 185

Query: 112 ETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAAREL 171
                F H + ++N M+ I+ K+R  + +  +++EMG + L+T +TF +A++  AAA+E 
Sbjct: 186 AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER 245

Query: 172 KKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLI 231
           KK V +F LM  Y F   + ++N +++ L   KL  EA+ L  KLKE    + +TY +L+
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305

Query: 232 KGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMN 291
            G+C V ++IEA++IWN M++ G + ++ A   M+  L ++ K  +A+KLF  M+S    
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365

Query: 292 DLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYN 351
             +  +Y+++I+  C +     A   FD+M+  G + D + ++ LI G   + +    Y 
Sbjct: 366 PNV-RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 425

Query: 352 IMGRIEK----PDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHL 411
           ++  +++    PD   Y+A+IK +   +     T+++ +MI+   EP +HT+ M+++ + 
Sbjct: 426 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 485

Query: 412 GRRG------------RKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRF 471
             R             +KG+ P  N  T+ + GL+  GKS EA +Y+E ++ +G++ P  
Sbjct: 486 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 545

Query: 472 DYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRR 507
           DYNKF   +       +F E+  R +  G    A+IF R+ +    R ++R
Sbjct: 546 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

[Close]
BLAST of CmaCh12G000960 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-36
Identity = 100/420 (23.81%), Postives = 208/420 (49.52%), Query Frame = 1 

Query: 68  NSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHTAVSFNKM 127
           +S  L L S L      +S E    V N F  +    YRFFQ++E   ++ H+  +++ M
Sbjct: 81  SSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMM 140

Query: 128 IDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFG 187
           I+   K R   L+WDLI  M +++++  +TF + +R  A A+++ + +  F++M  Y   
Sbjct: 141 IESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLP 200

Query: 188 YSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIW 247
            +LV+ N ++  LC  K   +A+ +   +++    D  TY +L++G+    ++ +A +++
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 260

Query: 248 NLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPT---YSLVIKW 307
             M++ G   ++     M+++L KA ++DEAL + ++M  +    +  PT   YS+++  
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS----ICKPTTFIYSVLVHT 320

Query: 308 LCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEK----PD 367
              + +  +A + F EM + G +AD +  +SLI       R +  Y ++  ++     P+
Sbjct: 321 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 380

Query: 368 LSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRR---------- 427
               + +++ L+      EA  VFR+MI + CEP   TY M+++    ++          
Sbjct: 381 SKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWK 440

Query: 428 --GRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEE 469
              +KG+ P ++  ++ + GL +   + +A   +E +++ G+      + +       EE
Sbjct: 441 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495

[Close]
BLAST of CmaCh12G000960 vs. NCBI nr
Match: gi|659089350|ref|XP_008445460.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 [Cucumis melo])

HSP 1 Score: 867.1 bits (2239), Expect = 1.6e-248
Identity = 431/509 (84.68%), Postives = 461/509 (90.57%), Query Frame = 1 

Query: 1   MAVVKYRHIIISKFPFSSIFHQRFSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVC 60
           MA + YR III+ F FS IFHQRFS FTSDS   TAA       +NI  AID THLRRVC
Sbjct: 1   MAAITYRRIIINNFSFSFIFHQRFSPFTSDS---TAA-------DNIPSAIDSTHLRRVC 60

Query: 61  TVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHT 120
           TVLYQQQNS D++LH+KL AC+FNLSHEFFLQVCNTFP SWRPVYRFFQFTET PNFTHT
Sbjct: 61  TVLYQQQNSPDIKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRFFQFTETHPNFTHT 120

Query: 121 AVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHL 180
            VSFNK+ID+VGKSRNIDLLW LIQEMGRRRLV DKTFVVALRTLA ARELKKCVE FHL
Sbjct: 121 VVSFNKLIDVVGKSRNIDLLWGLIQEMGRRRLVNDKTFVVALRTLATARELKKCVEFFHL 180

Query: 181 MNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDV 240
           MNGYGF YSLV+LNKVVE LCGCKL DEAKFLV+KL EWIKADGVTYKLLIKGFC+VGD+
Sbjct: 181 MNGYGFCYSLVTLNKVVENLCGCKLVDEAKFLVMKLNEWIKADGVTYKLLIKGFCNVGDL 240

Query: 241 IEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSL 300
           IEASK+WNLMV+EGFE EMEAVEEM+NVLFK NKLDEALKLFQA+RSNRMNDLIP TY L
Sbjct: 241 IEASKMWNLMVDEGFEPEMEAVEEMVNVLFKTNKLDEALKLFQAVRSNRMNDLIPSTYRL 300

Query: 301 VIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPD 360
           VI+WLCNKGK RQA+ VFDEM KRG E DNS HSSLIYG+LARGRRREAYNIM RIE PD
Sbjct: 301 VIRWLCNKGKVRQAFIVFDEMHKRGLEVDNSVHSSLIYGLLARGRRREAYNIMRRIENPD 360

Query: 361 LSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVN 420
           L VYHA+IKGLL+L+RA+EATQVFREMIERGCEPIMHTY+MLLQGHLG+RGRKGLDP VN
Sbjct: 361 LDVYHALIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQGHLGKRGRKGLDPFVN 420

Query: 421 FDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRL 480
           FD+IFVGGLVK GKSLEATKYVER+MKRGLEVPRFDYNKFLHYYSN+EGVVMFREVGNRL
Sbjct: 421 FDSIFVGGLVKNGKSLEATKYVERIMKRGLEVPRFDYNKFLHYYSNDEGVVMFREVGNRL 480

Query: 481 REVGLVDLADIFQRYGEKMTTRDRRRDRA 510
           REVGLVDLADIFQRYGEKMTTRDRRR+RA
Sbjct: 481 REVGLVDLADIFQRYGEKMTTRDRRRNRA 499

[Close]
BLAST of CmaCh12G000960 vs. NCBI nr
Match: gi|449453031|ref|XP_004144262.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 [Cucumis sativus])

HSP 1 Score: 865.9 bits (2236), Expect = 3.5e-248
Identity = 430/509 (84.48%), Postives = 460/509 (90.37%), Query Frame = 1 

Query: 1   MAVVKYRHIIISKFPFSSIFHQRFSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVC 60
           MA + YR III+ F FS IFHQRFS FTSDS         S + +NI   ID THLRRVC
Sbjct: 1   MAAITYRRIIINNFSFSFIFHQRFSPFTSDS---------STAADNIPQPIDSTHLRRVC 60

Query: 61  TVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHT 120
           TVLYQQQNS DL+LH+KL AC+FNLSHEFFLQVCNTFP SWRPVYRFFQFTET PNFTHT
Sbjct: 61  TVLYQQQNSPDLKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRFFQFTETHPNFTHT 120

Query: 121 AVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHL 180
           AVSFNK+ID+VGKSRNIDLLW LIQEMGRRRLV DKTFVVALRTLA ARELKKCVE FHL
Sbjct: 121 AVSFNKLIDVVGKSRNIDLLWGLIQEMGRRRLVNDKTFVVALRTLATARELKKCVEFFHL 180

Query: 181 MNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDV 240
           MNGYGF YSLV+LN+VVEKLCGCKL DEAKFLV+KL EWIKADGVTYKLLIKGFC+VGD+
Sbjct: 181 MNGYGFCYSLVTLNRVVEKLCGCKLVDEAKFLVMKLNEWIKADGVTYKLLIKGFCNVGDL 240

Query: 241 IEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSL 300
           IEASK+WNLMV+EGFE EMEAVEEMMNVLFK NKLDEALKLFQA+RS+RMNDLIP TYSL
Sbjct: 241 IEASKMWNLMVDEGFEPEMEAVEEMMNVLFKTNKLDEALKLFQALRSDRMNDLIPSTYSL 300

Query: 301 VIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPD 360
           VI+WLCNKGK  QA+ VFDEM KRG E DNS HSSLIYG+LARGRRREAYNIM RIE PD
Sbjct: 301 VIRWLCNKGKVGQAFIVFDEMHKRGLEVDNSVHSSLIYGLLARGRRREAYNIMRRIENPD 360

Query: 361 LSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVN 420
           L VYHA IKGLL+L+RA+EATQVFREMIERGCEPIMHTY+MLLQGHLG+RGRKG DPLVN
Sbjct: 361 LDVYHAFIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQGHLGKRGRKGSDPLVN 420

Query: 421 FDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRL 480
           FD+IFVGGLVK GKSLEATKYVER+MKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGN+L
Sbjct: 421 FDSIFVGGLVKNGKSLEATKYVERLMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNKL 480

Query: 481 REVGLVDLADIFQRYGEKMTTRDRRRDRA 510
           REVGLVDLADIFQRYGEKMTTRDRRR+RA
Sbjct: 481 REVGLVDLADIFQRYGEKMTTRDRRRNRA 500

[Close]
BLAST of CmaCh12G000960 vs. NCBI nr
Match: gi|596297449|ref|XP_007227334.1| (hypothetical protein PRUPE_ppa015711mg, partial [Prunus persica])

HSP 1 Score: 695.7 bits (1794), Expect = 6.3e-197
Identity = 334/458 (72.93%), Postives = 390/458 (85.15%), Query Frame = 1 

Query: 51  IDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSFNLSHEFFLQVCNTFPFSWRPVYRFFQF 110
           ++P HL RVCT+LYQQQNS + RLHS L + +F L+HEFFLQVCN+FP SWRPVY FF +
Sbjct: 9   VNPAHLLRVCTILYQQQNSPESRLHSNLNSSNFQLTHEFFLQVCNSFPLSWRPVYLFFLY 68

Query: 111 TETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDLIQEMGRRRLVTDKTFVVALRTLAAARE 170
           T+T PNFTHT VSFNKM+D++GK+RNI LLWD++ EMGRRRLV DKTF++AL+TLA ARE
Sbjct: 69  TQTHPNFTHTTVSFNKMVDVIGKARNIQLLWDMLHEMGRRRLVNDKTFLIALKTLAKARE 128

Query: 171 LKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGCKLADEAKFLVLKLKEWIKADGVTYKLL 230
           L KCVE FH+MNGYGF YSL +LNKVVE LCG KL  EAKF+V KLKE I  +GVTY+ L
Sbjct: 129 LNKCVEFFHVMNGYGFDYSLETLNKVVESLCGSKLVVEAKFIVFKLKESIGPNGVTYRCL 188

Query: 231 IKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVEEMMNVLFKANKLDEALKLFQAMRSNRM 290
           I+GFCDVGD+IEASKIWNLMV+EGF+ ++ A+E+MM  LFK N+  EALK+FQ MR NRM
Sbjct: 189 IEGFCDVGDLIEASKIWNLMVDEGFDPDIGAIEKMMETLFKTNRYGEALKVFQMMRVNRM 248

Query: 291 NDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLKRGFEADNSAHSSLIYGVLARGRRREAY 350
           +DL   TY LVI+W+C  GK  +A+ VF+EM KR  EADNS  +SL+YG+LARGR R AY
Sbjct: 249 DDLGLSTYRLVIEWMCKSGKIEEAHVVFEEMQKRRIEADNSTLASLVYGLLARGRVRVAY 308

Query: 351 NIMGRIEKPDLSVYHAMIKGLLRLRRASEATQVFREMIERGCEPIMHTYVMLLQGHLGRR 410
            I+  IEKPD++V+H MIKGLLRLR+  EAT+VFREMI++GCEP MHTY+MLLQGHLG+R
Sbjct: 309 KIVEGIEKPDINVFHGMIKGLLRLRKLREATEVFREMIKKGCEPNMHTYIMLLQGHLGKR 368

Query: 411 GRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVERVMKRGLEVPRFDYNKFLHYYSNEEGV 470
           GRKG DPLVNFDTIFVGGLVK GKSLEATKYVERV+KRGLEVPRFDYNKFLHYYSNEEGV
Sbjct: 369 GRKGSDPLVNFDTIFVGGLVKAGKSLEATKYVERVIKRGLEVPRFDYNKFLHYYSNEEGV 428

Query: 471 VMFREVGNRLREVGLVDLADIFQRYGEKMTTRDRRRDR 509
            MF EVG +LREVGLVDLADIFQRYGEKM TRDRRR+R
Sbjct: 429 GMFEEVGKKLREVGLVDLADIFQRYGEKMATRDRRRNR 466

[Close]
BLAST of CmaCh12G000960 vs. NCBI nr
Match: gi|645229514|ref|XP_008221500.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g26500 [Prunus mume])

HSP 1 Score: 682.9 bits (1761), Expect = 4.2e-193
Identity = 337/486 (69.34%), Postives = 397/486 (81.69%), Query Frame = 1 

Query: 24  FSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLRLHSKLRACSF 83
           F   T++S     A P+ +S       ++P HL RVCT+LYQQQNS   R    L + +F
Sbjct: 17  FRFITTESTQTQLATPSPSSS-----PVNPAHLLRVCTILYQQQNSPASRX-PHLNSSNF 76

Query: 84  NLSHEFFLQVCNTFPFSWRPVYRFFQFTETDPNFTHTAVSFNKMIDIVGKSRNIDLLWDL 143
            L+HEFFLQVCN+FP SWRPVY FF +T+T PNFTHT VSFNKM+D++GK+RNI LLWD+
Sbjct: 77  QLTHEFFLQVCNSFPLSWRPVYLFFLYTQTHPNFTHTTVSFNKMVDVIGKARNIQLLWDM 136

Query: 144 IQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLVSLNKVVEKLCGC 203
           + EMGRRRLV DKTF++AL+TLA AREL KCVE FH+MNGYGF YSL +LNKVVE LCG 
Sbjct: 137 LHEMGRRRLVNDKTFLIALKTLAKARELNKCVEFFHVMNGYGFDYSLETLNKVVESLCGS 196

Query: 204 KLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMVEEGFEAEMEAVE 263
           KL  EAKF+V KLKE I  +GVTY+ LI+GFCDVGD+IEASKIWNLMV++GF+ ++ A+E
Sbjct: 197 KLVAEAKFIVFKLKESIGPNGVTYRCLIEGFCDVGDLIEASKIWNLMVDQGFDPDIGAIE 256

Query: 264 EMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKTRQAYNVFDEMLK 323
           +MM  LFK N+  EALK+FQ MR NRM+DL   TY LVI+W+C +GK  +A+ VF+EM K
Sbjct: 257 KMMEPLFKTNRYGEALKVFQMMRVNRMDDLGLSTYRLVIEWMCKRGKIEEAHVVFEEMQK 316

Query: 324 RGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGLLRLRRASEATQV 383
           R  EADNS  +SL YG+LARGR R AY I+  IEKPD++V+H MIKGLLRLR+  EAT+V
Sbjct: 317 RRIEADNSRLASLAYGLLARGRVRVAYKIVEGIEKPDINVFHGMIKGLLRLRKLREATEV 376

Query: 384 FREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVKFGKSLEATKYVE 443
           FREMI++GCEP MHTY+MLLQGHLG+RGRKG DPLVNFDTIFVGGLVK GKSLEATKYVE
Sbjct: 377 FREMIKKGCEPNMHTYIMLLQGHLGKRGRKGSDPLVNFDTIFVGGLVKAGKSLEATKYVE 436

Query: 444 RVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEKMTTRD 503
           RV+KRGLEVPRFDYNKFLHYYSNEEGV MF EVG +LREVGLVDLADIFQRYGEKM TRD
Sbjct: 437 RVIKRGLEVPRFDYNKFLHYYSNEEGVEMFEEVGKKLREVGLVDLADIFQRYGEKMATRD 496

Query: 504 RRRDRA 510
           RRR+RA
Sbjct: 497 RRRNRA 496

[Close]
BLAST of CmaCh12G000960 vs. NCBI nr
Match: gi|694388801|ref|XP_009370072.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 680.2 bits (1754), Expect = 2.8e-192
Identity = 335/491 (68.23%), Postives = 397/491 (80.86%), Query Frame = 1 

Query: 20  FHQRFSSFTSDSINPTAAPPTSASHNNIGLAIDPTHLRRVCTVLYQQQNSSDLRLHSKLR 79
           F +RF++  S      AA P+          +DP  L RVCT+LYQQQNS + RLHS L 
Sbjct: 29  FFRRFTTTESTQPQLAAAAPSP---------VDPARLLRVCTILYQQQNSPESRLHSNLN 88

Query: 80  ACSFNLSHEFFLQVCNTFPFSWRPVYRFFQFTETD-PNFTHTAVSFNKMIDIVGKSRNID 139
           + +F L+HEFFLQVCN+FP SWRPVY FF++T++  P+FTHTAVSFNKM+D++GKSRNI 
Sbjct: 89  SSAFQLTHEFFLQVCNSFPLSWRPVYLFFRYTQSHHPDFTHTAVSFNKMLDVIGKSRNIQ 148

Query: 140 LLWDLIQEMGRRRLVTDKTFVVALRTLAAARELKKCVELFHLMNGYGFGYSLVSLNKVVE 199
           L WD + +MGRRRLV  KTF++ALRTLA AREL KCV+ FH MNG+GFGY L +LN VVE
Sbjct: 149 LFWDTLHKMGRRRLVNRKTFLIALRTLAKARELNKCVDFFHAMNGFGFGYDLGNLNMVVE 208

Query: 200 KLCGCKLADEAKFLVLKLKEWIKADGVTYKLLIKGFCDVGDVIEASKIWNLMVEEGFEAE 259
            LCG KL  EA+FLVLKLKE I+ DG TY+ LI+GFCDVGD+IEASKIWNLMV+EGF+ +
Sbjct: 209 DLCGSKLVVEARFLVLKLKESIRPDGFTYRCLIQGFCDVGDLIEASKIWNLMVDEGFDPD 268

Query: 260 MEAVEEMMNVLFKANKLDEALKLFQAMRSNRMNDLIPPTYSLVIKWLCNKGKTRQAYNVF 319
           ++AVE+MM  LFK N+  EALK+FQ MR NRM DL   TY LVI+W+C +GK  +A+ VF
Sbjct: 269 IDAVEKMMETLFKTNRYGEALKVFQMMRVNRMEDLGLSTYRLVIEWMCKRGKIEEAHEVF 328

Query: 320 DEMLKRGFEADNSAHSSLIYGVLARGRRREAYNIMGRIEKPDLSVYHAMIKGLLRLRRAS 379
           +EM KR  EADNS  +SL+YG+LARGR   A+ ++  IEKPD+S+YH +IKGLLRLR+A 
Sbjct: 329 EEMHKRRIEADNSTLASLVYGLLARGRVTMAFKVVEGIEKPDISLYHGLIKGLLRLRKAR 388

Query: 380 EATQVFREMIERGCEPIMHTYVMLLQGHLGRRGRKGLDPLVNFDTIFVGGLVKFGKSLEA 439
           +AT+VFREMI R CEP MHTY+MLLQGHLG+RGRKG DPLVNFDTIFVGGLVK GKSLEA
Sbjct: 389 DATEVFREMIRRRCEPNMHTYIMLLQGHLGKRGRKGSDPLVNFDTIFVGGLVKAGKSLEA 448

Query: 440 TKYVERVMKRGLEVPRFDYNKFLHYYSNEEGVVMFREVGNRLREVGLVDLADIFQRYGEK 499
           TKYVERV+KRGLEVPRFDYNKFLHYYSNEEGV MF EVG + REVGLVDLADIFQRYGEK
Sbjct: 449 TKYVERVIKRGLEVPRFDYNKFLHYYSNEEGVEMFEEVGKKFREVGLVDLADIFQRYGEK 508

Query: 500 MTTRDRRRDRA 510
           M TRDRRR+RA
Sbjct: 509 MATRDRRRNRA 510

The following BLAST results are available for this feature:
BLAST of CmaCh12G000960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR59_ARATH5.8e-17461.28Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis th... [more]
PP293_ARATH4.9e-6429.30Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
PP294_ARATH1.9e-6329.09Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
PP382_ARATH2.4e-6329.09Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
PP129_ARATH3.6e-3523.81Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh12G000960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD74_CUCSA2.5e-24884.48Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366430 PE=4 SV=1[more]
M5Y2L9_PRUPE4.4e-19772.93Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015711mg PE=4 S... [more]
A0A067KYM3_JATCU8.9e-19066.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15698 PE=4 SV=1[more]
F6HFU4_VITVI1.3e-18866.60Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00520 PE=4 SV=... [more]
A0A067FSH2_CITSI1.4e-18769.35Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048269mg PE=4 S... [more]
BLAST of CmaCh12G000960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26500.13.2e-17561.28 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62470.12.7e-6529.30 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.11.0e-6429.09 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.11.4e-6429.09 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G77360.12.0e-3623.81 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmaCh12G000960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089350|ref|XP_008445460.1|1.6e-24884.68PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 [Cucum... [more]
gi|449453031|ref|XP_004144262.1|3.5e-24884.48PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 [Cucum... [more]
gi|596297449|ref|XP_007227334.1|6.3e-19772.93hypothetical protein PRUPE_ppa015711mg, partial [Prunus persica][more]
gi|645229514|ref|XP_008221500.1|4.2e-19369.34PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro... [more]
gi|694388801|ref|XP_009370072.1|2.8e-19268.23PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 isofor... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G000960.1CmaCh12G000960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 265..288
score: 0.0028coord: 225..255
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 297..339
score: 4.3E-10coord: 359..405
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 363..394
score: 4.0E-8coord: 265..289
score: 6.6E-4coord: 225..256
score: 4.5E-6coord: 297..329
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 329..359
score: 5.546coord: 223..257
score: 11.082coord: 294..328
score: 10.479coord: 258..292
score: 7.618coord: 189..219
score: 5.426coord: 360..394
score: 12.77coord: 418..452
score: 5.152coord: 120..154
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 259..390
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 66..494
score: 7.5E-236coord: 13..39
score: 7.5E
NoneNo IPR availablePANTHERPTHR24015:SF584SUBFAMILY NOT NAMEDcoord: 13..39
score: 7.5E-236coord: 66..494
score: 7.5E