CmaCh11G012160 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYRKRGIAR
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 6.3e-58 Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2) HSP 1 Score: 215.3 bits (547), Expect = 3.8e-55 Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 1
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 1
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2) HSP 1 Score: 139.8 bits (351), Expect = 2.0e-32 Identity = 76/125 (60.80%), Postives = 101/125 (80.80%), Query Frame = 1
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RS7_PERMH (30S ribosomal protein S7 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rpsG PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.0e-12 Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TrEMBL
Match: A0A142BZ01_ZIZJJ (Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 5.2e-59 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TrEMBL
Match: A0A0M4R6T5_CANSA (Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 5.2e-59 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TrEMBL
Match: D5I3F4_CUCPE (Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 8.8e-59 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TrEMBL
Match: D5I3C7_CITLA (Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 1.5e-58 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TrEMBL
Match: A0A0M4MPL4_9MAGN (Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 7.4e-58 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TAIR10
Match: AT2G07696.1 (AT2G07696.1 Ribosomal protein S7p/S5e family protein) HSP 1 Score: 224.6 bits (571), Expect = 3.5e-59 Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1
BLAST of CmaCh11G012160 vs. TAIR10
Match: ATMG01270.1 (ATMG01270.1 mitochondrial ribosomal protein S7) HSP 1 Score: 224.6 bits (571), Expect = 3.5e-59 Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|1016880331|ref|YP_009243658.1| (ribosomal protein S7 (mitochondrion) [Cannabis sativa]) HSP 1 Score: 235.0 bits (598), Expect = 7.4e-59 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|1016470801|ref|YP_009241662.1| (ribosomal protein S7 (mitochondrion) [Ziziphus jujuba]) HSP 1 Score: 235.0 bits (598), Expect = 7.4e-59 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|295311708|ref|YP_003587368.1| (ribosomal protein S7 [Cucurbita pepo]) HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|295311664|ref|YP_003587257.1| (ribosomal protein S7 [Citrullus lanatus]) HSP 1 Score: 233.4 bits (594), Expect = 2.2e-58 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|927682212|gb|ALE29224.1| (ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis]) HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|