CmaCh11G012050 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTAATGATCAGTCAGTTTGCATTGACTTTCACTCATTTGATTCATAGGTTTTGTTATTACACATAATATCTCGAATAAGAAGAAGAAAAGTCTGAGAGGAATGAAATTGAGGAATTTTCTATGGTACATGATTCTACATCGACAACAAGAAAAGAAGAAAGAAATTCTTTAGTGCTGAATTTCGATATTGATTGTTAAATTGCCTTGCTGCGTCAGAAGAAGGATAGCTATACTGATCTCCATTTCAGTTAATTTCTCCATTTACTGATCTCATCCAGAATCGATCCCCTTTTGACTGTAAATATGTGGAGCTCGGCATGTGCTGATATTATCACCAGTATTCGATACTGGGTCTTTCATAGCATTACTATACCTTCTTTCTCTATTGATTGCGGGTTGGTTATTCATTCGTCAGCACGGGTTTAGCTTACGATGTTATTGTAAGCCCTCGTCCAAATGAGTATTTTACCGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCAATGAATTTAGTAGATCTTTTTAG ATGGATTTAATGATCAGTCAGTTTGCATTGACTTTCACTCATTTGATTCATAGCACGGGTTTAGCTTACGATGTTATTGTAAGCCCTCGTCCAAATGAGTATTTTACCGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCAATGAATTTAGTAGATCTTTTTAG ATGGATTTAATGATCAGTCAGTTTGCATTGACTTTCACTCATTTGATTCATAGCACGGGTTTAGCTTACGATGTTATTGTAAGCCCTCGTCCAAATGAGTATTTTACCGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCAATGAATTTAGTAGATCTTTTTAG MDLMISQFALTFTHLIHSTGLAYDVIVSPRPNEYFTESRQGIPLITGRFDSLEQLNEFSRSF
BLAST of CmaCh11G012050 vs. Swiss-Prot
Match: PSBE_CITSI (Cytochrome b559 subunit alpha OS=Citrus sinensis GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 6.9e-18 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. Swiss-Prot
Match: PSBE_CUSRE (Cytochrome b559 subunit alpha OS=Cuscuta reflexa GN=psbE PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 6.9e-18 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. Swiss-Prot
Match: PSBE_CUCSA (Cytochrome b559 subunit alpha OS=Cucumis sativus GN=psbE PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 2.6e-17 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. Swiss-Prot
Match: PSBE_OENEH (Cytochrome b559 subunit alpha OS=Oenothera elata subsp. hookeri GN=psbE PE=3 SV=4) HSP 1 Score: 88.6 bits (218), Expect = 2.6e-17 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. Swiss-Prot
Match: PSBE_NYMAL (Cytochrome b559 subunit alpha OS=Nymphaea alba GN=psbE PE=3 SV=3) HSP 1 Score: 88.6 bits (218), Expect = 2.6e-17 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 1
BLAST of CmaCh11G012050 vs. TrEMBL
Match: A0A159BNT0_9ROSI (Photosystem II protein V OS=Citrus platymamma GN=psbE PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.7e-16 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. TrEMBL
Match: A0A0U2GK36_9ROSI (Cytochrome b559 subunit alpha OS=Zanthoxylum piperitum GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.7e-16 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. TrEMBL
Match: K4KBZ8_AVECA (Cytochrome b559 subunit alpha (Fragment) OS=Averrhoa carambola GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.7e-16 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. TrEMBL
Match: A0A109RTK7_OXADI (Cytochrome b559 subunit alpha OS=Oxalis dillenii GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.7e-16 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. TrEMBL
Match: A0A088DB46_CITAU (Cytochrome b559 subunit alpha OS=Citrus aurantiifolia GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.7e-16 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. TAIR10
Match: ATCG00580.1 (ATCG00580.1 photosystem II reaction center protein E) HSP 1 Score: 86.7 bits (213), Expect = 5.6e-18 Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 1
BLAST of CmaCh11G012050 vs. NCBI nr
Match: gi|114329673|ref|YP_740492.1| (photosystem II cytochrome b559 alpha subunit (chloroplast) [Citrus sinensis]) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. NCBI nr
Match: gi|160017983|sp|A7M969.2|PSBE_CUSRE (RecName: Full=Cytochrome b559 subunit alpha; AltName: Full=PSII reaction center subunit V) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. NCBI nr
Match: gi|372483908|gb|AEX95596.1| (photosystem II cytochrome b559 alpha subunit (chloroplast) [Haworthia cymbiformis]) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-15 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. NCBI nr
Match: gi|37721660|gb|AAN32340.1| (cytochrome b-559 alpha subunit, partial (chloroplast) [Palisota bogneri]) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-15 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh11G012050 vs. NCBI nr
Match: gi|374974813|gb|AFA27498.1| (photosystem II cytochrome b559 alpha subunit, partial (plastid) [Belosynapsis ciliata]) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-15 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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