CmaCh11G007790 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGAGAGTTGATGATAACGACTGTGAATTCCAAATTGTGCGTTCGATCTCAGTTGCTACAATTCCAATCCAAATCCGCTTCCCATTTTTCTGCTACTTCAGAATCTCAGTTCCCCATCCAGTCACTTTCACTTTCTTTCCTCGCTCCTCGCCCTGTTCTTCAATTCGGGCAATGGTGGATGAAATTCCGATCAAGAGAAATAGGGTATGGCCGCACGTTTTTGATTTTCTCTGCATTACTATTCCATAATCATAAAGGTATCTTTCATGGGAATCAAAACAAGATCAATTATGGAACAACAGCCTTCCGCCCAACTTTAAAGGTTGCGTGGGACGATTCCCATTTCGTTTTCCCCTCTCATCCAAGGAATTTTCTGTTCTATCTTCTGTTTACTTGCCTTCTCCGATTGATCTTTCGTTGATCCTTATTTCGCATGATTTTCTTTGAAGCCATCTCTCGTCTGTGATTCCTCCCTTGCGGCAGGGGAGTTTGATTCTGTAACATTTGTTCACGTTTTGGACTCGGATTTCTTCATTTCCAGTTTTAGAGCTATGGATTATTATTAGTGTGGCTGGTGATTTCATTCAGATTCATGTTTCTGCTGGTTGTTGGTGAAATAATGGGCTAAGTTTACAAGTGATTAAGTAGTTAAGTAGTCGATTTTTGTTGTTTAAATTGATATTAATGAGGTTTTGGATGTGTAAGATTCACTGTCCTTCATCCCTTTGCCTTTGCCAACCTTCCCCTCATATACATTCCACTGGATCAGTATCATTAGATTTGCAAAACTCACCACATTTGCCTTCACGAGATGTGCCAGTCATCGGAACTTCTGGTTCCAGTGTTGAGACCCTTGAACCTAAGCGCGACAAAGTGCCGGAGAGTGAGTTTGGAAACAAGAGCAGTTTGAGGAAGCTGAATTCGCGGTCAGGTGTATCAAAGGAGAAGCATGTAAAAACTGTACAATGGATGGATTTTTCAGGCAAAGAACTTGCTGAGATCAGGGAATTTGAAGCTAGGTAATATCTCTTACCATTTAATCTCTCTCTTCTCATTTGAGACTTGAAGAGCCTGGAAGGAGTGGAGAAGGTGTGATCTCTGTTTTTAGCATCTCGTAAATCATGATCGAGGAGATCGAATATCATCCAAATAATTGAAATTCAGGGTCTTCCTTCTATTTAATTATTTGATTTTAGAATCTTTACATCTCATGAATTGAGTTTGAGAAGATTTAATGTCATCAAAATAATTGAAATGCTGTTTCTTTCATTGATTTATTATTTGATTAGATCTTGTATTAGTATGGAATTACCAAGTTACTTAAATATCAAGTTATACAATATAATCTGTTCATATTAACACAACATACTGAAACTTGATCGAATATTGGAGGTATGATGAAATAATATGTACTTAGAAGGATGGAACTGCAATTACATTTGATGCTTTAGATGTTCATACCAGTTTAAAGATATTTGAGATGATGCTTCATGTCCCTATTCCAAAATCTTTGAAGAGTTCATAAACTTACAGATGGGATTGGAATGCCCAAATTTGAGTTTTCTTCATGATGGCTGCTGTTTTCTTGTGAATGAACTATACATACTGACTACTGATCGTGTACGCGTGTGCGTGTACATATTTTTCTTATGCAACAGTGAAGATGAAGATTCGGATTATGAAGACGAGGATAACGGAAGCTGCATCTGTACTATTTTATGAAATTTCTCAGTAGCTTAGATTTTCAAATTTAAAAAAGAAGAGGAAGTAGCTAACGAAGCCCGCTTAATGTCGGTTACAATCATATTCGTCCTGAAAGGTCTTTGATGCTTCTTTGTTTTCATTTCTCAGATTAGAATATGTTGTGAGAATGAAAGGCAAAATGGAGCTTTATTTACCAATAATGTACCTAATTTATTTGTTTTATGAAAATGTTGTTAATTCTTCAACATGAACAAATTTCACTTTTCACTTGATTGGCAAAAGAATTCTCTGCTTTGTAAATTATATACTGAATGTTATCTCATGAGGCCACTACTTATACTCTAAGCTTCCATGATTGTCTAAATTATTGATGCATGCTGCCTGAGATATGAAATTTTGTTATATTGTTTTGCTGCATTTTAATGTTTCTAAAGTGCAGACTATTTGAACCAGAGCAGATTCCTACATATGGGATCATTGAAACTCATTGCCTTCGCCTTGTAGACCTTCGAAAGATGCGTCTACGTGGTGTTCGTGGACTAAAGTACCCAGAGATGTAAACGATTAGCACTGCAAACACAAAGCCAGCTGGGAACCCAATTCCTGCACCTATCCAGGAAAACACTTCTTGCTTTTCTTCCTCCTCAGCTTGTTTTGTCGGTTGCTCGTCTTCTGGACATGGCTGTTGGATTTGAATTCCACATAGCCCACTGTTGTTGGCATAATAGCTTGGAGTGTTCAT TTGGAGAGTTGATGATAACGACTGTGAATTCCAAATTGTGCGTTCGATCTCAGTTGCTACAATTCCAATCCAAATCCGCTTCCCATTTTTCTGCTACTTCAGAATCTCAGTTCCCCATCCAGTCACTTTCACTTTCTTTCCTCGCTCCTCGCCCTGTTCTTCAATTCGGGCAATGGTGGATGAAATTCCGATCAAGAGAAATAGGGTATGGCCGCACGTTTTTGATTTTCTCTGCATTACTATTCCATAATCATAAAGGTATCTTTCATGGGAATCAAAACAAGATCAATTATGGAACAACAGCCTTCCGCCCAACTTTAAAGGTTGCGTGGGACGATTCCCATTTCGTTTTCCCCTCTCATCCAAGGAATTTTCTGTTCTATCTTCTGTTTACTTGCCTTCTCCGATTGATCTTTCGTTGATCCTTATTTCGCATGATTTTCTTTGAAGCCATCTCTCGTCTGTGATTCCTCCCTTGCGGCAGGGGAGTTTGATTCTGTAACATTTGTTCACGTTTTGGACTCGGATTTCTTCATTTCCAGTTTTAGAGCTATGGATTATTATTAGTGTGGCTGGTGATTTCATTCAGATTCATGTTTCTGCTGGTTGTTGGTGAAATAATGGGCTAAGTTTACAAGTGATTAAGTAGTTAAGTAGTCGATTTTTGTTGTTTAAATTGATATTAATGAGGTTTTGGATGTGTAAGATTCACTGTCCTTCATCCCTTTGCCTTTGCCAACCTTCCCCTCATATACATTCCACTGGATCAGTATCATTAGATTTGCAAAACTCACCACATTTGCCTTCACGAGATGTGCCAGTCATCGGAACTTCTGGTTCCAGTGTTGAGACCCTTGAACCTAAGCGCGACAAAGTGCCGGAGAGTGAGTTTGGAAACAAGAGCAGTTTGAGGAAGCTGAATTCGCGGTCAGGTGTATCAAAGGAGAAGCATGTAAAAACTGTACAATGGATGGATTTTTCAGGCAAAGAACTTGCTGAGATCAGGGAATTTGAAGCTAGTGAAGATGAAGATTCGGATTATGAAGACGAGGATAACGGAAGCTGCATCTGTACTATTTTATGAAATTTCTCAGTAGCTTAGATTTTCAAATTTAAAAAAGAAGAGGAAGTAGCTAACGAAGCCCGCTTAATGTCGGTTACAATCATATTCGTCCTGAAAGACTATTTGAACCAGAGCAGATTCCTACATATGGGATCATTGAAACTCATTGCCTTCGCCTTGTAGACCTTCGAAAGATGCGTCTACGTGGTGTTCGTGGACTAAAGTACCCAGAGATGTAAACGATTAGCACTGCAAACACAAAGCCAGCTGGGAACCCAATTCCTGCACCTATCCAGGAAAACACTTCTTGCTTTTCTTCCTCCTCAGCTTGTTTTGTCGGTTGCTCGTCTTCTGGACATGGCTGTTGGATTTGAATTCCACATAGCCCACTGTTGTTGGCATAATAGCTTGGAGTGTTCAT ATGAGGTTTTGGATGTGTAAGATTCACTGTCCTTCATCCCTTTGCCTTTGCCAACCTTCCCCTCATATACATTCCACTGGATCAGTATCATTAGATTTGCAAAACTCACCACATTTGCCTTCACGAGATGTGCCAGTCATCGGAACTTCTGGTTCCAGTGTTGAGACCCTTGAACCTAAGCGCGACAAAGTGCCGGAGAGTGAGTTTGGAAACAAGAGCAGTTTGAGGAAGCTGAATTCGCGGTCAGGTGTATCAAAGGAGAAGCATGTAAAAACTGTACAATGGATGGATTTTTCAGGCAAAGAACTTGCTGAGATCAGGGAATTTGAAGCTAGTGAAGATGAAGATTCGGATTATGAAGACGAGGATAACGGAAGCTGCATCTGTACTATTTTATGA MRFWMCKIHCPSSLCLCQPSPHIHSTGSVSLDLQNSPHLPSRDVPVIGTSGSSVETLEPKRDKVPESEFGNKSSLRKLNSRSGVSKEKHVKTVQWMDFSGKELAEIREFEASEDEDSDYEDEDNGSCICTIL
BLAST of CmaCh11G007790 vs. TrEMBL
Match: A0A0A0M2C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599500 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.1e-49 Identity = 105/139 (75.54%), Postives = 113/139 (81.29%), Query Frame = 1
BLAST of CmaCh11G007790 vs. TrEMBL
Match: D7SLL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00380 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.8e-23 Identity = 65/136 (47.79%), Postives = 82/136 (60.29%), Query Frame = 1
BLAST of CmaCh11G007790 vs. TrEMBL
Match: M5W1J4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017969mg PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 6.9e-22 Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 1
BLAST of CmaCh11G007790 vs. TrEMBL
Match: F4JDC7_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At3g13480 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15 Identity = 64/164 (39.02%), Postives = 86/164 (52.44%), Query Frame = 1
BLAST of CmaCh11G007790 vs. TrEMBL
Match: V4LXT6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021633mg PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.8e-14 Identity = 63/168 (37.50%), Postives = 85/168 (50.60%), Query Frame = 1
BLAST of CmaCh11G007790 vs. TAIR10
Match: AT3G13480.1 (AT3G13480.1 unknown protein) HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18 Identity = 64/164 (39.02%), Postives = 86/164 (52.44%), Query Frame = 1
BLAST of CmaCh11G007790 vs. TAIR10
Match: AT1G55475.1 (AT1G55475.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09 Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 1
BLAST of CmaCh11G007790 vs. NCBI nr
Match: gi|659100273|ref|XP_008451012.1| (PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo]) HSP 1 Score: 204.9 bits (520), Expect = 8.6e-50 Identity = 106/139 (76.26%), Postives = 114/139 (82.01%), Query Frame = 1
BLAST of CmaCh11G007790 vs. NCBI nr
Match: gi|449452646|ref|XP_004144070.1| (PREDICTED: uncharacterized protein LOC101217749 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 7.3e-49 Identity = 105/139 (75.54%), Postives = 113/139 (81.29%), Query Frame = 1
BLAST of CmaCh11G007790 vs. NCBI nr
Match: gi|1009123951|ref|XP_015878813.1| (PREDICTED: uncharacterized protein LOC107415059 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23 Identity = 67/139 (48.20%), Postives = 85/139 (61.15%), Query Frame = 1
BLAST of CmaCh11G007790 vs. NCBI nr
Match: gi|225435780|ref|XP_002285740.1| (PREDICTED: uncharacterized protein LOC100260500 [Vitis vinifera]) HSP 1 Score: 115.5 bits (288), Expect = 6.9e-23 Identity = 65/136 (47.79%), Postives = 82/136 (60.29%), Query Frame = 1
BLAST of CmaCh11G007790 vs. NCBI nr
Match: gi|595831983|ref|XP_007206380.1| (hypothetical protein PRUPE_ppa017969mg [Prunus persica]) HSP 1 Score: 111.7 bits (278), Expect = 9.9e-22 Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|