CmaCh09G012520 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGATTATCACTTTGTGTACAAGGATGTTGAAGGAGCCTCCACTCAGTGGGATGATATTCAGACAAAGTTGGGAAACCTACCTCCAAAGCCTGCTCCATTCAAGCCACCAGCCTTCACACCTGCCCAAGATGAGGCATCCGTCTCCAAAGACAAGTCTTGGATTGATCAGAAGACTGAAGAGGAGCTTGAAGACCTTGAGGATGATCTAGATCTTGATGATGACAACTTTCTCCAAGAGTATAGGTTGGTTTTCTTCATTAAACCTTCATGTTTGGTTGTTGCTTTTGTGTAATTTTATTCATTGCTGGTAGAACTAAAGAAAAACTGAGATCAGTTGATGCTGAATTGGTCAATTTGGTGGCCAGGAGTGTCATAAATTTATTAATTGAAGGAAATCTAAATTTTTCTTCTCCATTCAACAAGTATGAGATTTTCTCTTTAATTAGCTTTTCACCATCTTGTTTTTTAGTTAATTCATTCCCTAATATTTCTTCTTCATCCAATTTCTTACTTGAATTGATATCCTCTGACATTCTGTTACAAAAGAATTACAAGATCTCTGAATTTGATGCAACTTTATTTTTGGGATAGGAAAAAGAGGTTGGTGGAGATTAGAGAAGCAGCTAAAATCTCTAAATTTGGATCAGTAAATCCAATATCAGGGTCAGATTTTGTGCGTGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTTGTTATTCTCTACAAAGAAGGGTACCATCCATGACCAACGCCCCAAATGTTGTTATGTTCTTTACATTCTGTTGACATTTACTCTATGGTGTGTTAATATCCTTTTTATGTTATATTATGATCTCATGATAGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTGGCCACGAGATATCCAGCCACAAAATTTGTTAAAATAATATCCACAGATTGCATTCCCAACTACCCAGATTGTAATCTTCCTACTTTGTTAGTTTACAACAATGGTGCAGTGAAAGCAAATTATGTGGGCCTTCGAAGTTTCGGCAGAAGATGCACTCCAGAAGGTACACATTTATATACAACTAAGAATGCCCATTTGGTTTGGTTTGTGTCCTCTGCAACTTCTTTCTAGTTAGTTATATATCATTGTGTTATTGTTCAATGGTCAGCGTTCTTCTTTGGCTAGATATTTGAAAGCATGTTATCACTTTCCTCGTATGTCTGAAATTGTGTTATATGATTGAGTTCTAAGCCATCGAGTTCCGTTGGTTTTGTGACTTGTGAAGTTGAATTCAAGGCTTCATTGGGTTATGTTTAGCTCGAGACAGGGTTTGTTGCACTATGATTGAGGAGGTTCTCCCCCTATTTTGGGATAAGGGAAGGATTTTGCATTAGACTTATTTCTTTTTTGTATTGCGGAGAATTTAGTTAGAAAGAAATGGTAGAATATTTTGGGAAGTTGAGAGATCATAAGAGGAGGTTTGAAAGAAAGGTTGCTAGGTTTATTGTGTCCATGGGTGTCTATTACCCAATATATATTTTTTTTTTGCAAGTATGAGCTATGTTTGATTCTTTTGGGTTTGAGTCATTTTCTGTAGTTAGTGGATGGACTCCTTTTATGTGGGCTTGTATATTTTCTTTCATTTTTTTTCAATGGGTGTTTGGTTTCTTGACAAAAGAATAATAATAATATGATGAAACTTCCGTGGGGTTGTGTGATATGTGTGCAACGGAAACTATACAAACTTTGCTTTGTTAGGAACCACGGACCTCCACAATGATATGATATTGTCCGCTTTGAGCATGAGCTCTCATGACTTTATTTTTAGTTTCCCCAAAAGCCTCGTACCAATGGAGATAGTATTTCTTACTTATAAACTCATGATCATCCTATTAATTAGTCCCAATGTGGGCCTCCCTCTCAATACCTTCAAAACCGTCAAGTTTACTTGAAGAATCTGCTAAAATCTGCTAACTATGGAGGATATGTCCAGATGATAAATTTCTGAAACCATGTATCTGAAGTTGTACTAAGTTGTTGACCATATTTGTGTTGCAAGCTCTTTATATCCTGCAAATGATCATCTAATTCTTGGTTGATGGTTATCAGGTGTTGCATTAGTTCTTTGTCAAGCAGACCCAGTGCTTAATGACGGTCAGTCTGGAAACGATGAATCGAGAAAATCCATGCTCGAAGGCGTACGCAGAAAGATAATCGAGAAAGTGGTGAGAGATCATGAAGATGGGATTGACGATGGGTCTTCGAGTGATTAGTTTTTGAATCGATCGGGTTCTTCTTTTCTAACGCCCTCTGTTTTAGTTGCTGGAGATTGAAAAGTACTGTTTGGTTATTGCTCATTCTATCGAATGTTTTATTATATAATGTATACTTATGTGATGTGTGCTGCTATGTGGATGTTGACTCATCATATATTCAAATTGCATCAAATCTAAGCCTAAAATGAAGCCAATTGAACAATACGTGGTGATCATTCTAGAATTTTTCTAAATTTCTGCCAACACTCATAGACTTTCCA ATGGGTGATTATCACTTTGTGTACAAGGATGTTGAAGGAGCCTCCACTCAGTGGGATGATATTCAGACAAAGTTGGGAAACCTACCTCCAAAGCCTGCTCCATTCAAGCCACCAGCCTTCACACCTGCCCAAGATGAGGCATCCGTCTCCAAAGACAAGTCTTGGATTGATCAGAAGACTGAAGAGGAGCTTGAAGACCTTGAGGATGATCTAGATCTTGATGATGACAACTTTCTCCAAGAGTATAGGAAAAAGAGGTTGGTGGAGATTAGAGAAGCAGCTAAAATCTCTAAATTTGGATCAGTAAATCCAATATCAGGGTCAGATTTTGTGCGTGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTTGTTATTCTCTACAAAGAAGGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTGGCCACGAGATATCCAGCCACAAAATTTGTTAAAATAATATCCACAGATTGCATTCCCAACTACCCAGATTGTAATCTTCCTACTTTGTTAGTTTACAACAATGGTGCAGTGAAAGCAAATTATGTGGGCCTTCGAAGTTTCGGCAGAAGATGCACTCCAGAAGGTGTTGCATTAGTTCTTTGTCAAGCAGACCCAGTGCTTAATGACGGTCAGTCTGGAAACGATGAATCGAGAAAATCCATGCTCGAAGGCGTACGCAGAAAGATAATCGAGAAAGTGGTGAGAGATCATGAAGATGGGATTGACGATGGGTCTTCGAGTGATTAGTTTTTGAATCGATCGGGTTCTTCTTTTCTAACGCCCTCTGTTTTAGTTGCTGGAGATTGAAAAGTACTGTTTGGTTATTGCTCATTCTATCGAATGTTTTATTATATAATGTATACTTATGTGATGTGTGCTGCTATGTGGATGTTGACTCATCATATATTCAAATTGCATCAAATCTAAGCCTAAAATGAAGCCAATTGAACAATACGTGGTGATCATTCTAGAATTTTTCTAAATTTCTGCCAACACTCATAGACTTTCCA ATGGGTGATTATCACTTTGTGTACAAGGATGTTGAAGGAGCCTCCACTCAGTGGGATGATATTCAGACAAAGTTGGGAAACCTACCTCCAAAGCCTGCTCCATTCAAGCCACCAGCCTTCACACCTGCCCAAGATGAGGCATCCGTCTCCAAAGACAAGTCTTGGATTGATCAGAAGACTGAAGAGGAGCTTGAAGACCTTGAGGATGATCTAGATCTTGATGATGACAACTTTCTCCAAGAGTATAGGAAAAAGAGGTTGGTGGAGATTAGAGAAGCAGCTAAAATCTCTAAATTTGGATCAGTAAATCCAATATCAGGGTCAGATTTTGTGCGTGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTTGTTATTCTCTACAAAGAAGGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTGGCCACGAGATATCCAGCCACAAAATTTGTTAAAATAATATCCACAGATTGCATTCCCAACTACCCAGATTGTAATCTTCCTACTTTGTTAGTTTACAACAATGGTGCAGTGAAAGCAAATTATGTGGGCCTTCGAAGTTTCGGCAGAAGATGCACTCCAGAAGGTGTTGCATTAGTTCTTTGTCAAGCAGACCCAGTGCTTAATGACGGTCAGTCTGGAAACGATGAATCGAGAAAATCCATGCTCGAAGGCGTACGCAGAAAGATAATCGAGAAAGTGGTGAGAGATCATGAAGATGGGATTGACGATGGGTCTTCGAGTGATTAG MGDYHFVYKDVEGASTQWDDIQTKLGNLPPKPAPFKPPAFTPAQDEASVSKDKSWIDQKTEEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKISKFGSVNPISGSDFVREVSQAPSDVWVVVILYKEGIQECDVLMNCLQELATRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSMLEGVRRKIIEKVVRDHEDGIDDGSSSD
BLAST of CmaCh09G012520 vs. Swiss-Prot
Match: PDCL3_HUMAN (Phosducin-like protein 3 OS=Homo sapiens GN=PDCL3 PE=1 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.3e-33 Identity = 84/232 (36.21%), Postives = 129/232 (55.60%), Query Frame = 1
BLAST of CmaCh09G012520 vs. Swiss-Prot
Match: PDCL3_DANRE (Phosducin-like protein 3 OS=Danio rerio GN=pdcl3 PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.8e-33 Identity = 87/239 (36.40%), Postives = 134/239 (56.07%), Query Frame = 1
BLAST of CmaCh09G012520 vs. Swiss-Prot
Match: PDCL3_PONAB (Phosducin-like protein 3 OS=Pongo abelii GN=PDCL3 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32 Identity = 83/232 (35.78%), Postives = 128/232 (55.17%), Query Frame = 1
BLAST of CmaCh09G012520 vs. Swiss-Prot
Match: PDCL3_MOUSE (Phosducin-like protein 3 OS=Mus musculus GN=Pdcl3 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.9e-32 Identity = 76/182 (41.76%), Postives = 114/182 (62.64%), Query Frame = 1
BLAST of CmaCh09G012520 vs. Swiss-Prot
Match: PDCL3_RAT (Phosducin-like protein 3 OS=Rattus norvegicus GN=Pdcl3 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.1e-32 Identity = 86/242 (35.54%), Postives = 138/242 (57.02%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TrEMBL
Match: A0A0A0LDG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G849940 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 9.2e-132 Identity = 236/254 (92.91%), Postives = 245/254 (96.46%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TrEMBL
Match: W9SIW8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017639 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 2.0e-118 Identity = 209/253 (82.61%), Postives = 232/253 (91.70%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TrEMBL
Match: B9RBM1_RICCO (Phosducin, putative OS=Ricinus communis GN=RCOM_1678550 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 8.3e-117 Identity = 208/253 (82.21%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TrEMBL
Match: D7UBF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00260 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 7.1e-116 Identity = 210/253 (83.00%), Postives = 225/253 (88.93%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TrEMBL
Match: V4W334_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016373mg PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.1e-115 Identity = 208/253 (82.21%), Postives = 227/253 (89.72%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TAIR10
Match: AT5G14240.1 (AT5G14240.1 Thioredoxin superfamily protein) HSP 1 Score: 383.3 bits (983), Expect = 1.2e-106 Identity = 181/256 (70.70%), Postives = 221/256 (86.33%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TAIR10
Match: AT5G66410.1 (AT5G66410.1 phosducin-like protein 3 homolog) HSP 1 Score: 52.4 bits (124), Expect = 4.8e-07 Identity = 44/178 (24.72%), Postives = 81/178 (45.51%), Query Frame = 1
BLAST of CmaCh09G012520 vs. TAIR10
Match: AT3G50960.1 (AT3G50960.1 phosducin-like protein 3 homolog) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06 Identity = 44/179 (24.58%), Postives = 83/179 (46.37%), Query Frame = 1
BLAST of CmaCh09G012520 vs. NCBI nr
Match: gi|659119370|ref|XP_008459619.1| (PREDICTED: phosducin-like protein 3 [Cucumis melo]) HSP 1 Score: 482.3 bits (1240), Expect = 5.3e-133 Identity = 240/254 (94.49%), Postives = 245/254 (96.46%), Query Frame = 1
BLAST of CmaCh09G012520 vs. NCBI nr
Match: gi|449458187|ref|XP_004146829.1| (PREDICTED: phosducin-like protein 3 [Cucumis sativus]) HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131 Identity = 236/254 (92.91%), Postives = 245/254 (96.46%), Query Frame = 1
BLAST of CmaCh09G012520 vs. NCBI nr
Match: gi|703157000|ref|XP_010111613.1| (hypothetical protein L484_017639 [Morus notabilis]) HSP 1 Score: 433.3 bits (1113), Expect = 2.8e-118 Identity = 209/253 (82.61%), Postives = 232/253 (91.70%), Query Frame = 1
BLAST of CmaCh09G012520 vs. NCBI nr
Match: gi|255536977|ref|XP_002509555.1| (PREDICTED: phosducin-like protein 3 [Ricinus communis]) HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-116 Identity = 208/253 (82.21%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of CmaCh09G012520 vs. NCBI nr
Match: gi|225452157|ref|XP_002263692.1| (PREDICTED: phosducin-like protein 3 [Vitis vinifera]) HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-115 Identity = 210/253 (83.00%), Postives = 225/253 (88.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|