CmaCh09G011750 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGCTACTTGGGATGATAGTGATGAAAGTGCAAGTGGAAGTGATGAAGAAGTTGCAAATTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGAAGATGAACAAGAAGATGAGGTAACTCTTGAATCTCTTTCTTATCATGAATTATTTAAACTTGTTGATGAGATGACAATTGATTTAGAAAAACTTAGTTCAAAGTATGTTGTGCTTAAAAAGAAATATAAGACTTCAATTATTGAAAATAAGTCTTTGCTAAATGAAATTTCTTGCTTGAAGGAGAAGGATCATAATATTGTTAAAATTGATGTACCTTGTGAAAAGCATGTATTTGATTGTGATGAGAAAAATGCATTAATTGATAAAGTCAAGACTCTTGAGCATGATTGTGGTGAAAAAGATAAATTAATTAAATTGCTCAAAGAGAATGAATCAAATAATTTGCAAGAACTTGGTAGGGCTAAGGAATCTATTAAAATGTTAACAATAGGTGCTCAAAAATTAGATAAAATACTTGAAGGAGGTAAGTCATATGGTGATAAAAGAGGATTAGGCTATATTGATGAATGTTCTACACCTTCAAGTTCTAAAACAATCTTTGTTAAAGCATCCCCTATCTTGCCTAAATCTAACACATGTAAATTTGTATCTAAGTATGATAAATCTAGATTTGTGCCTATATGTCATTATTGTGGTGTTGAAGGTCATATTAGACCTAAGTGCTTTAAATTGAAAAATTCTCAAAATATTCATTTAGGAAGAAAAGTTTCTCAAAATACAAAGTTTAACAATGTTTTAGAAAATAATTTTTCGAATAAAAATAGAATACACAAATTTAGTCCAAGAAATAAATTCTTGCATAATGTCGTTTGTTTCTCGTGTGGTAAGTTTGGACATAAAGATTATTCTTGTTACTTATCTAAATACAATGTCTTTAATATGAATGCAAATATGAAATGGATTCCTAAATTTGTGAATACTAACTTTCTAGGACCCAAACAAGTATGGGTACCAAAAGGTCAATTTTGAATATCTTTGTTTTTAGGTTTGTTTGAAAGCCTCCAAGAAAAATAAGTGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGTAATCCATCCAAGTTTGTCAATCTTTCCAAGAAGGATGGTGGCTTAGTAACCTTTGGTGATAACAAGAAGGGTAAAATAATTGGTAAGGGTACTATAGGTAATGACTCTTGTACTCTCATTAAAAATGTATTGTTAGTTGATGGTTTAAAGCATGACTTACTTAGCATTAGTCAATTATGTGATAAAGGTTTTAGAGTTGTATTTGATAAGAATAATTGCATAATTGAAAATGCTAGTGATAGAAAAGTTTTGTTTGTAGGAAATAGAGACGATAATGTGTATACTATTGATTTGAATGATTGTCCTACAAATGATAAATGTCTTTCGGTTTTGCTTGATAACTCTTGGCTATGGCATAGAAGACTAGGACATGCCAGTATGTACTTGATTTCAAATATTTCAAAAAATTCATTAGTGAGAGGTCTCCCTCAACTTAAATTTGAAAAAGATAAAATTTGTGACGCTTGTCAAATGGGTAAGCAAACTAAGTCTTCTTTCAAATCTAAAAATATGATTTCTACTACTAGACCTCTTCAACTACTCCATATAGACTTATTTGGCCCTTCTAAAATAGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTGGATGATTTTTCAAGATTTACTTGGGTTTTGATGATAAAACATAAGAATGATGTTTTGAAAAGATTTGCTAGTTTTGTAAAAAGAGTTCAAAATGAAAAAGGGTTTTTAATTACTAAAATTAGGAGTGACCATGGGGGAGAATTTAACAGTGTTGCCTTTGAAAAATTTTGTGAAGATAATGGTTTTTCTCATGACTTCTCCTCTCCAAGGACTCCTCAACAAAACGGTGTGGTTGAAAGGAAAAATCGTACTTTACAAGAATTTGCTAGATCAATGTTAAATGAGTATGATTTACCTAAATATTTTTGGGCGGAAGCCGTTAATACCGCTTGTTATATTTTAAATAGAGTTTTAATTAGACCTTCATTAAATAAAACTCCTTATGAACTCTGGCATAACAAAATTCCAAATGTTGGGTATTTCAAAGTTTTTGGTTGTAAATGTTTTATTTTGAACAACAAAGAAAAGCTTGGAAAGTTTGATTCAAAAACGGATATTGGTATTTTTCTTGGCTATTCATCTACTAGTAAAGCTTATAGAATTTTCAATAAGAGAACTTTAGTTATTGAAGAATCTATGCATGTGGTATTTGATGAATCTTGCAATAATATTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAGAAATTTTGGAGATTTACTCGTTAGTGACAACGGCAAAGAAATTGTTACGAGTAAAGAAGAGATGAGCTTAAAGGAAGAAGGTTCTTCATCAATGCCAAAAGAATGGAGGTATGCCTTGTCTCATCCCAAGGACTTGATTCTTGGTGATCTCGAACAAGGTGTGAAAACTCGCTCTTCTATTAATTTATTTAATAATCTTGCTTTTGTTTCTCAAATTGAACCAAAAAGTCTTAAGGATGCCGAAAATGATGAGTTTTGGATTTTAGCCATGCAAGAAGAGCTAAATCAATTTGAAAGGAACAAAGTTTGGGAATTAGTCCATAGGCCATCTAATACTTCTATTATTGGAACCAAATGGGTTTTTAGAAATAAAATGGATGAAAATGGGAATATCATTAGAAATAAAGCTAGGCTTGTAGCTCAAGGTTATTGTCAAGAGGAAGGCATAGATTATGAAGAAACTTTTGCACCCGTTGCTAGATTAGAAGCTATTAGAATGTTACTTGCTTTTGCTTCTTACAAAAATTTTGTATTATATCAAATGGATGTGAAAAGTGCATTTTTGAATGGTTATATTATGGAGGAAGTTTATGTAGAACAACCTCCCGGATTTGAAAATGTAGAATTTCCTCATCATGTCTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGTAATTTTCTTATTGGGAATGATTTTAAAATGGGCAAACTCGACACTACACTCTTTATTAAGATTAAAGAAAACGATATGCTATTAGTGCAAATATATGTGGATGATATCATATTTGGTTCTACTAATCCTTCTTTATGTGAAGAATTTTCTAAATGTATGCATAGTGAGTTTGAGATGAGTATGATGGGAGAACTCAGTTTCTTTCTTGGACTTCAAATCAAACAACTCAAGAATGGTATCTTCATCAATCAAGAGAAATACACTAAAGATTTGCTCAAAAGATTCAAGTTCAATGGAGGTAAGATTGCAAGAACTCCCATGAGCACATCCACTAAGCTTGACAAGGATGAAAAAGGTAAAAGTGTGGATATTAAAGCTTATCGAGGTATGATTGGATCTTTACTTTACTTGACCGCTAGTAGACCCGATATTATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCCTGTCCTAAGGAATCTCATTTACATGCCGTTAAGAGAATATTTAAATATTTGCTTGGAACTATTGATCTAGGATTGTGGTATCCTAGAAATGTTGAATTTAAATTGGTAGGATATTCTGATGCAGATTTTGCCGGAAGCTTACTTGATCGTAAAAGTACTAGTGGAACTTGTCAATTTCTTGGTAGTTCCTTAG ATGAAGGCTACTTGGGATGATAGTGATGAAAGTGCAAGTGGAAGTGATGAAGAAGTTGCAAATTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGAAGATGAACAAGAAGATGAGGTTTGTTTGAAAGCCTCCAAGAAAAATAAGTGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGTAATCCATCCAAGTTTGTCAATCTTTCCAAGAAGGATGGTGGCTTAGTAACCTTTGGTGATAACAAGAAGGGTAAAATAATTGGTAAGGGTACTATAGGAAATAGAGACGATAATGTGTATACTATTGATTTGAATGATTGTCCTACAAATGATAAATGTCTTTCGGTTTTGCTTGATAACTCTTGGCTATGGCATAGAAGACTAGGACATGCCAAAAGAAATTTTGGAGATTTACTCGTTAGTGACAACGGCAAAGAAATTGTTACGAGTAAAGAAGAGATGAGCTTAAAGGAAGAAGGTTCTTCATCAATGCCAAAAGAATGGAGGTATGCCTTGTCTCATCCCAAGGACTTGATTCTTGGTGATCTCGAACAAGGTGTGAAAACTCGCTCTTCTATTAATTTATTTAATAATCTTGCTTTTGTTTCTCAAATTGAACCAAAAAGTCTTAAGGATGCCGAAAATGATGAGTTTTGGATTTTAGCCATGCAAGAAGAGCTAAATCAATTTGAAAGGAACAAAGTTTGGGAATTAGTCCATAGGCCATCTAATACTTCTATTATTGGAACCAAATGGGTTTTTAGAAATAAAATGGATGAAAATGGGAATATCATTAGAAATAAAGCTAGGCTTGTAGCTCAAGGTTATTGTCAAGAGGAAGGCATAGATTATGAAGAAACTTTTGCACCCGTTGCTAGATTAGAAGCTATTAGAATGTTACTTGCTTTTGCTTCTTACAAAAATTTTGTATTATATCAAATGGATGTGAAAAGTGCATTTTTGAATGGTTATATTATGGAGGAAGTTTATGTAGAACAACCTCCCGGATTTGAAAATGTAGAATTTCCTCATCATGTCTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGTGAGTTTGAGATGAGTATGATGGGAGAACTCAGTTTCTTTCTTGGACTTCAAATCAAACAACTCAAGAATGGTATCTTCATCAATCAAGAGAAATACACTAAAGATTTGCTCAAAAGATTCAAGTTCAATGGAGGTAAGATTGCAAGAACTCCCATGAGCACATCCACTAAGCTTGACAAGGATGAAAAAGGTAAAAGTGTGGATATTAAAGCTTATCGAGGTATGATTGGATCTTTACTTTACTTGACCGCTAGTAGACCCGATATTATGTTTAGTGATATTCTGATGCAGATTTTGCCGGAAGCTTACTTGATCGTAAAAGTACTAGTGGAACTTGTCAATTTCTTGGTAGTTCCTTAG ATGAAGGCTACTTGGGATGATAGTGATGAAAGTGCAAGTGGAAGTGATGAAGAAGTTGCAAATTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGAAGATGAACAAGAAGATGAGGTTTGTTTGAAAGCCTCCAAGAAAAATAAGTGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGTAATCCATCCAAGTTTGTCAATCTTTCCAAGAAGGATGGTGGCTTAGTAACCTTTGGTGATAACAAGAAGGGTAAAATAATTGGTAAGGGTACTATAGGAAATAGAGACGATAATGTGTATACTATTGATTTGAATGATTGTCCTACAAATGATAAATGTCTTTCGGTTTTGCTTGATAACTCTTGGCTATGGCATAGAAGACTAGGACATGCCAAAAGAAATTTTGGAGATTTACTCGTTAGTGACAACGGCAAAGAAATTGTTACGAGTAAAGAAGAGATGAGCTTAAAGGAAGAAGGTTCTTCATCAATGCCAAAAGAATGGAGGTATGCCTTGTCTCATCCCAAGGACTTGATTCTTGGTGATCTCGAACAAGGTGTGAAAACTCGCTCTTCTATTAATTTATTTAATAATCTTGCTTTTGTTTCTCAAATTGAACCAAAAAGTCTTAAGGATGCCGAAAATGATGAGTTTTGGATTTTAGCCATGCAAGAAGAGCTAAATCAATTTGAAAGGAACAAAGTTTGGGAATTAGTCCATAGGCCATCTAATACTTCTATTATTGGAACCAAATGGGTTTTTAGAAATAAAATGGATGAAAATGGGAATATCATTAGAAATAAAGCTAGGCTTGTAGCTCAAGGTTATTGTCAAGAGGAAGGCATAGATTATGAAGAAACTTTTGCACCCGTTGCTAGATTAGAAGCTATTAGAATGTTACTTGCTTTTGCTTCTTACAAAAATTTTGTATTATATCAAATGGATGTGAAAAGTGCATTTTTGAATGGTTATATTATGGAGGAAGTTTATGTAGAACAACCTCCCGGATTTGAAAATGTAGAATTTCCTCATCATGTCTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGTGAGTTTGAGATGAGTATGATGGGAGAACTCAGTTTCTTTCTTGGACTTCAAATCAAACAACTCAAGAATGGTATCTTCATCAATCAAGAGAAATACACTAAAGATTTGCTCAAAAGATTCAAGTTCAATGGAGGTAAGATTGCAAGAACTCCCATGAGCACATCCACTAAGCTTGACAAGGATGAAAAAGGTAAAAGTGTGGATATTAAAGCTTATCGAGGTATGATTGGATCTTTACTTTACTTGACCGCTAGTAGACCCGATATTATGTTTAGTGATATTCTGATGCAGATTTTGCCGGAAGCTTACTTGATCGTAAAAGTACTAGTGGAACTTGTCAATTTCTTGGTAGTTCCTTAG MKATWDDSDESASGSDEEVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIGNRDDNVYTIDLNDCPTNDKCLSVLLDNSWLWHRRLGHAKRNFGDLLVSDNGKEIVTSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSINLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSDILMQILPEAYLIVKVLVELVNFLVVP
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 137.9 bits (346), Expect = 3.0e-31 Identity = 73/149 (48.99%), Postives = 97/149 (65.10%), Query Frame = 1
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 6.6e-31 Identity = 86/237 (36.29%), Postives = 133/237 (56.12%), Query Frame = 1
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 6.9e-20 Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: YE12B_YEAST (Transposon Ty1-ER2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-ER2 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09 Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: YM14B_YEAST (Transposon Ty1-MR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-MR2 PE=3 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09 Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5AVS9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021518 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 2.9e-118 Identity = 214/298 (71.81%), Postives = 250/298 (83.89%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5AH07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035911 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 4.8e-113 Identity = 215/321 (66.98%), Postives = 254/321 (79.13%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5C4X7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018629 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 8.8e-107 Identity = 200/301 (66.45%), Postives = 242/301 (80.40%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5BK23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044238 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 1.6e-103 Identity = 197/323 (60.99%), Postives = 239/323 (73.99%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5C8K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 4.5e-103 Identity = 202/318 (63.52%), Postives = 243/318 (76.42%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8) HSP 1 Score: 143.3 bits (360), Expect = 4.0e-34 Identity = 72/172 (41.86%), Postives = 112/172 (65.12%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)) HSP 1 Score: 100.1 bits (248), Expect = 3.9e-21 Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1
BLAST of CmaCh09G011750 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein) HSP 1 Score: 60.1 bits (144), Expect = 4.4e-09 Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 1
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147778546|emb|CAN62895.1| (hypothetical protein VITISV_021518 [Vitis vinifera]) HSP 1 Score: 433.7 bits (1114), Expect = 4.2e-118 Identity = 214/298 (71.81%), Postives = 250/298 (83.89%), Query Frame = 1
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147768968|emb|CAN62460.1| (hypothetical protein VITISV_035911 [Vitis vinifera]) HSP 1 Score: 416.4 bits (1069), Expect = 6.9e-113 Identity = 215/321 (66.98%), Postives = 254/321 (79.13%), Query Frame = 1
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147836561|emb|CAN70885.1| (hypothetical protein VITISV_018629 [Vitis vinifera]) HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106 Identity = 200/301 (66.45%), Postives = 242/301 (80.40%), Query Frame = 1
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|778708530|ref|XP_011656225.1| (PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis sativus]) HSP 1 Score: 389.4 bits (999), Expect = 9.1e-105 Identity = 200/263 (76.05%), Postives = 227/263 (86.31%), Query Frame = 1
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147783586|emb|CAN61443.1| (hypothetical protein VITISV_044238 [Vitis vinifera]) HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103 Identity = 197/323 (60.99%), Postives = 239/323 (73.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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