CmaCh09G011660 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTGTGCGGAAAGTCGAGTCGTTACAAATGGCATCAGAGCCAAATGCCGAGTGGTGTGCCAGTAAGGATGTTGAGCCCGAAGGGAGGTGGGATTGTGAGATCCCACATTGGTTGGAGATGAGAATAAAACAGTCCTTATAAAGGAGTGAAAACCTCTCCCTAATGGACACGTTTTAAAACCTTGAAGGGAAGCCTGGAAAGGAAAGCCCAAAGAGAACAATATCTACTAACAGTGGGCTTAGGCTATTACAAATGGTATTAGAGCCAGACACCGGGCAGTGTGCCAGCAAGGATGTTGGGCCCTCAAGGGGGATGGATTGTAAAATCTCACATTCGTTAGAGAGGGGAACAAAGCATTTCTTATAGGGATGTGAAATCCTCTCCTAAGCAGACTTGTTTTAAAACCGTGAGCTTGATAGCGATACGTAACGGACCAAAGTGGACAATATCTACTAGCAGTGAGCTTGGGGTGTTACAAAAGGACTCGATATAAGCTACTGAAACGGAGTTCAATCTAAAAAAACAAGATTAAGCNTTTTTTCAACCTATGATGTTGATAAGGTTGAAAATTGTCTCCATAATTGAAATGATACACTTGGCATGACATATAAACATTTCATTGAAGTATTGCTCTATTATATTGCCTGAAAGAATGAGTGAAATTCTTGTATCTGATTAAAAATGTTAGCATAATTGAAATCTTTCAATTTTCTTAATGTATTGAGCTATCTTGTCCGAGTAAGATTAAGTGTTAGCAGAAGTTCTTTGAATGATGCAGAGTAAGATGAATTTTTTATTATTTCCTTTACTTCATTTTCTTAAAACTTTTGTTTTCTACTTCTATTTTGTAAAAGTCGCGAGTTTACTCATCGAGTTAAGTCAGTATCGATGGCCAAGTTTACTGTCCAAGAAGTTGAAGCACTTCAAAATGGTGGCAACCAGGTAATTGAAAAATGTTGCTTTTTCTGTATTTTGCATGTATGTTCTTTCCCTTTAATTTTTTTTTTAAAATATCAAAATATCTTTCTAGCGAGCAAGGGAAACCTATTTGAAGGATTGGGACTTTCAAAGGCAGCGATTGCCTGGTAACAGGTATGATATTTTTTTCATTTGTTTCTAAGACGACGAGCTTTTGTTATTAGACTAAAGAGCTGCTTTTGATAGTAGACTAAACGGCCCGCATGATATTCATCTTGCAGCAACATTGAAAAAATTCGGGAATTTATAAAGAATGTATATGTTGATAGAAAATATGCTGTTGGAAGAACATCCGAGAAGCCTCCTAGAGATATGCAGGTATTTTCTTTTAACCCAACGCCCAAAAAAAAAAAAAAAAAAAAAAAAATTGTCTGGCCATATAGTTGTACCCTTCACCTTAAAGGGAGGGTTCAAGAGCACCTCGTCCATCCAAGCTCAGCAATCTTTGTGCCACACCCAACAAATCTCAAATGATTTCAACTAGCAATTCCAATAAAAGAGAGCAAACTAAAACCCTAGAAAAGAAATCAAGATCTTGTGCCTCCTATGGAGAATGCACCATTGTGAGAACAAAACTAGGGAAGAGTGTCTTTGATCGTGATCCATGGTATTGACTCTCCCATGTAGAATCTTAACCTTCTTTAGTATTTTAACGTTCTAGGGAGGGCAAAAACAAGTTCGGGGGGATGACGAGAAGCCCCTAGAAGGATATGTGCCCTAA ATGCGTGTGCGGAAAGTCGAGTCGTTACAAATGGCATCAGAGCCAAATGCCGAGTGGTGTGCCAGTAAGGATGTTGAGCCCGAAGGGAGTCGCGAGTTTACTCATCGAGTTAAGTCAGTATCGATGGCCAAGTTTACTGTCCAAGAAGTTGAAGCACTTCAAAATGGTGGCAACCAGCGAGCAAGGGAAACCTATTTGAAGGATTGGGACTTTCAAAGGCAGCGATTGCCTGGTAACAGCAACATTGAAAAAATTCGGGAATTTATAAAGAATGTATATGTTGATAGAAAATATGCTGTTGGAAGAACATCCGAGAAGCCTCCTAGAGATATGCAGGGAGGGCAAAAACAAGTTCGGGGGGATGACGAGAAGCCCCTAGAAGGATATGTGCCCTAA ATGCGTGTGCGGAAAGTCGAGTCGTTACAAATGGCATCAGAGCCAAATGCCGAGTGGTGTGCCAGTAAGGATGTTGAGCCCGAAGGGAGTCGCGAGTTTACTCATCGAGTTAAGTCAGTATCGATGGCCAAGTTTACTGTCCAAGAAGTTGAAGCACTTCAAAATGGTGGCAACCAGCGAGCAAGGGAAACCTATTTGAAGGATTGGGACTTTCAAAGGCAGCGATTGCCTGGTAACAGCAACATTGAAAAAATTCGGGAATTTATAAAGAATGTATATGTTGATAGAAAATATGCTGTTGGAAGAACATCCGAGAAGCCTCCTAGAGATATGCAGGGAGGGCAAAAACAAGTTCGGGGGGATGACGAGAAGCCCCTAGAAGGATATGTGCCCTAA MRVRKVESLQMASEPNAEWCASKDVEPEGSREFTHRVKSVSMAKFTVQEVEALQNGGNQRARETYLKDWDFQRQRLPGNSNIEKIREFIKNVYVDRKYAVGRTSEKPPRDMQGGQKQVRGDDEKPLEGYVP
BLAST of CmaCh09G011660 vs. Swiss-Prot
Match: AGD14_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-28 Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 1
BLAST of CmaCh09G011660 vs. Swiss-Prot
Match: AGFG2_HUMAN (Arf-GAP domain and FG repeat-containing protein 2 OS=Homo sapiens GN=AGFG2 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07 Identity = 31/97 (31.96%), Postives = 53/97 (54.64%), Query Frame = 1
BLAST of CmaCh09G011660 vs. Swiss-Prot
Match: AGFG2_MOUSE (Arf-GAP domain and FG repeat-containing protein 2 OS=Mus musculus GN=Agfg2 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.2e-07 Identity = 31/97 (31.96%), Postives = 53/97 (54.64%), Query Frame = 1
BLAST of CmaCh09G011660 vs. Swiss-Prot
Match: AGFG1_BOVIN (Arf-GAP domain and FG repeat-containing protein 1 OS=Bos taurus GN=AGFG1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06 Identity = 24/66 (36.36%), Postives = 42/66 (63.64%), Query Frame = 1
BLAST of CmaCh09G011660 vs. Swiss-Prot
Match: AGFG1_HUMAN (Arf-GAP domain and FG repeat-containing protein 1 OS=Homo sapiens GN=AGFG1 PE=1 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06 Identity = 24/66 (36.36%), Postives = 42/66 (63.64%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TrEMBL
Match: E5GBY0_CUCME (GTPase activating protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 8.3e-36 Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TrEMBL
Match: A0A0A0LEP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816020 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 2.4e-35 Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TrEMBL
Match: A0A067E5X7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005051mg PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TrEMBL
Match: A0A067DYG5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005051mg PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TrEMBL
Match: V4SRQ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030836mg PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TAIR10
Match: AT1G08680.4 (AT1G08680.4 ARF GAP-like zinc finger-containing protein ZIGA4) HSP 1 Score: 127.1 bits (318), Expect = 8.0e-30 Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TAIR10
Match: AT4G13350.1 (AT4G13350.1 NSP (nuclear shuttle protein)-interacting GTPase) HSP 1 Score: 97.4 bits (241), Expect = 6.8e-21 Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of CmaCh09G011660 vs. TAIR10
Match: AT4G32630.2 (AT4G32630.2 ArfGap/RecO-like zinc finger domain-containing protein) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20 Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1
BLAST of CmaCh09G011660 vs. NCBI nr
Match: gi|659084990|ref|XP_008443183.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Cucumis melo]) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35 Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 1
BLAST of CmaCh09G011660 vs. NCBI nr
Match: gi|449437662|ref|XP_004136610.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis sativus]) HSP 1 Score: 156.4 bits (394), Expect = 3.5e-35 Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1
BLAST of CmaCh09G011660 vs. NCBI nr
Match: gi|641827453|gb|KDO46636.1| (hypothetical protein CISIN_1g005051mg [Citrus sinensis]) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 1
BLAST of CmaCh09G011660 vs. NCBI nr
Match: gi|568862645|ref|XP_006484787.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Citrus sinensis]) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 1
BLAST of CmaCh09G011660 vs. NCBI nr
Match: gi|641827454|gb|KDO46637.1| (hypothetical protein CISIN_1g005051mg [Citrus sinensis]) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |