CmaCh09G011630 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAATCAATTTAGGAGTGAGGAATTACAGGTGTGGAAAACCTGGCCATTTTAAACGAGATTGTCAGGTGAAAGTAGTGAGTGATCATTGCAGAAAGCCAGGCCATATTAAGCCAAATTACCAAGTCAAAATGCAGGAATTAGAAGCAAATGTTGTACATGAAAGTAAAAATTCTTCCGATCCAATTTGGGAATATTGCTTAACCATTGAGGTTCTTGACCAGCCAACAAACGTGACTTCAGCTGTACATCAAGATGATGTCTCTACAGATGCTCATGCCTTTATAGACTACAATGAAGAATGGATTCTCGATTCTGGTTGTTCTCATCATGCAAGTGGAAACAAAACTCTTCTATCAGATGTTTGTCCACATTGTCAAAAGAAGAGTAAAGGGCCCAACAAAGTGGCTAAATTGGAATCACGACTTTCTCAACTCTAGGAGGAACGGAAGAAAACAAGTGATCAACTAAGTGCATCTGAATCACACAAAAAGCAAGCCCAACAGAAAGTAGAAGAAGCAAAGAAACAACTATCAGATATGTCTGAAAAGCTTGAAGAATCCCAACAGCAGGTGTTTGAGCTCTCTGCTTCTAAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATTGCAATCGAGCATGGAAGTCAAAACTCGAATTCCCATTCATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCCAACCAAACCCGAAGTAACCTCACTAAGTCTATGGAAAAGCTTCAATCAGATGGAATCAAAACTTTTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGACTTTGATTTTTATGGAGGGAAGGAAGATGCCAGAAAGATTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTATAGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTTGTCGAAGATATCAAGGACGACCGCGAGGTTCAAGAATTCAAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA ATGAGAATCAATTTAGGAGTGAGGAATTACAGGTGTGGAAAACCTGGCCATTTTAAACGAGATTGTCAGGTGAAAGTAGTGAGTGATCATTGCAGAAAGCCAGGCCATATTAAGCCAAATTACCAAGTCAAAATGCAGGAATTAGAAGCAAATGTTGTACATGAAAGTAAAAATTCTTCCGATCCAATTTGGGAATATTGCTTAACCATTGAGGTTCTTGACCAGCCAACAAACGTGACTTCAGCTGTACATCAAGATGATGTCTCTACAGATGCTCATGCCTTTATAGACTACAATGAAGAATGGATTCTCGATTCTGGTTGTTCTCATCATGCAAGTGGAAACAAAACTCTTCTATCAGATGAGGAACGGAAGAAAACAAGTGATCAACTAAGTGCATCTGAATCACACAAAAAGCAAGCCCAACAGAAAGTAGAAGAAGCAAAGAAACAACTATCAGATATGTCTGAAAAGCTTGAAGAATCCCAACAGCAGGTGTTTGAGCTCTCTGCTTCTAAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATTGCAATCGAGCATGGAAGTCAAAACTCGAATTCCCATTCATGAAGTTCAGAGGCTCAAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTATAGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTTGTCGAAGATATCAAGGACGACCGCGAGGTTCAAGAATTCAAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA ATGAGAATCAATTTAGGAGTGAGGAATTACAGGTGTGGAAAACCTGGCCATTTTAAACGAGATTGTCAGGTGAAAGTAGTGAGTGATCATTGCAGAAAGCCAGGCCATATTAAGCCAAATTACCAAGTCAAAATGCAGGAATTAGAAGCAAATGTTGTACATGAAAGTAAAAATTCTTCCGATCCAATTTGGGAATATTGCTTAACCATTGAGGTTCTTGACCAGCCAACAAACGTGACTTCAGCTGTACATCAAGATGATGTCTCTACAGATGCTCATGCCTTTATAGACTACAATGAAGAATGGATTCTCGATTCTGGTTGTTCTCATCATGCAAGTGGAAACAAAACTCTTCTATCAGATGAGGAACGGAAGAAAACAAGTGATCAACTAAGTGCATCTGAATCACACAAAAAGCAAGCCCAACAGAAAGTAGAAGAAGCAAAGAAACAACTATCAGATATGTCTGAAAAGCTTGAAGAATCCCAACAGCAGGTGTTTGAGCTCTCTGCTTCTAAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATTGCAATCGAGCATGGAAGTCAAAACTCGAATTCCCATTCATGAAGTTCAGAGGCTCAAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTATAGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTTGTCGAAGATATCAAGGACGACCGCGAGGTTCAAGAATTCAAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA MRINLGVRNYRCGKPGHFKRDCQVKVVSDHCRKPGHIKPNYQVKMQELEANVVHESKNSSDPIWEYCLTIEVLDQPTNVTSAVHQDDVSTDAHAFIDYNEEWILDSGCSHHASGNKTLLSDEERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELHKLSQDCNRAWKSKLEFPFMKFRGSRNYGSNDSYERSNRYLNGDDSSNSKWGLSRVFDENRRKKDEGNYSSGGGGSRPKLNLEPRTLPVNDVKLSKISRTTARFKNSNPFGMVRPREEVLAEKGHD
BLAST of CmaCh09G011630 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.7e-09 Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 1
BLAST of CmaCh09G011630 vs. Swiss-Prot
Match: ICR2_ARATH (Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.1e-06 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0A0LDX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2SP95_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2RUD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2RMH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2RMG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein) HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10 Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TAIR10
Match: AT2G37080.1 (AT2G37080.1 ROP interactive partner 3) HSP 1 Score: 53.1 bits (126), Expect = 3.4e-07 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1
BLAST of CmaCh09G011630 vs. TAIR10
Match: AT5G60210.1 (AT5G60210.1 ROP interactive partner 5) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|449440061|ref|XP_004137803.1| (PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|700203804|gb|KGN58937.1| (hypothetical protein Csa_3G736850 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|659083992|ref|XP_008442649.1| (PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3-like [Cucumis melo]) HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19 Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = 1
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|823175163|ref|XP_012486019.1| (PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Gossypium raimondii]) HSP 1 Score: 87.8 bits (216), Expect = 3.5e-14 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|728848489|gb|KHG27932.1| (Interactor of constitutive active ROPs 2, chloroplastic -like protein [Gossypium arboreum]) HSP 1 Score: 87.8 bits (216), Expect = 3.5e-14 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |