CmaCh09G011570 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGAAAAGCTTGAAGAATCTCAACAGCAGGTGTTTGAGCTCTCCGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGCAATCGAGCATGGAAGTCCAAACTCGAAGCTGTTCAAAAGCAACACGCAATGGATGCTGCTGCATTGGCCTCTGCCATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCTAACCAAACCCGAAGTAACCTCGCTAAGTCTGTGGAAAAGAATCAATCAGATGGAATCAAAGCTATTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGGCTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGGTTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATTGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCAATCGAAGCTTAATCTGCAGCCACGTACGCTGCCGATGAATGATGTGAAGTCATCGAAGATATCAAGGACGACGGTGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACAAGGAGTTAAAGTCGAAAATTATGGAAGTGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAATAGAGAGAAGCTGGAGGAAGCCGAGTTTCAATAACTCTAGACAAGTGGGGCGGGGTGCTCAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGACAGATGCTCCACAAGAGGTTTTTGTTTTACAGGAGACTCTATTGCAATTTCATGA ATGTCTGAAAAGCTTGAAGAATCTCAACAGCAGGTGTTTGAGCTCTCCGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGCAATCGAGCATGGAAGTCCAAACTCGAAGCTGTTCAAAAGCAACACGCAATGGATGCTGCTGCATTGGCCTCTGCCATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCTAACCAAACCCGAAGTAACCTCGCTAAGTCTGTGGAAAAGAATCAATCAGATGGAATCAAAGCTATTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGGCTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGGTTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATTGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCAATCGAAGCTTAATCTGCAGCCACGTACGCTGCCGATGAATGATGTGAAGTCATCGAAGATATCAAGGACGACGGTGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACAAGGAGTTAAAGTCGAAAATTATGGAAGTGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAATAGAGAGAAGCTGGAGGAAGCCGAGTTTCAATAACTCTAGACAAGTGGGGCGGGGTGCTCAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGACAGATGCTCCACAAGAGGTTTTTGTTTTACAGGAGACTCTATTGCAATTTCATGA ATGTCTGAAAAGCTTGAAGAATCTCAACAGCAGGTGTTTGAGCTCTCCGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGCAATCGAGCATGGAAGTCCAAACTCGAAGCTGTTCAAAAGCAACACGCAATGGATGCTGCTGCATTGGCCTCTGCCATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCTAACCAAACCCGAAGTAACCTCGCTAAGTCTGTGGAAAAGAATCAATCAGATGGAATCAAAGCTATTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGGCTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGGTTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATTGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCAATCGAAGCTTAATCTGCAGCCACGTACGCTGCCGATGAATGATGTGAAGTCATCGAAGATATCAAGGACGACGGTGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACAAGGAGTTAAAGTCGAAAATTATGGAAGTGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAATAGAGAGAAGCTGGAGGAAGCCGAGTTTCAATAACTCTAGACAAGTGGGGCGGGGTGCTCAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGACAGATGCTCCACAAGAGGTTTTTGTTTTACAGGAGACTCTATTGCAATTTCATGA MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAINEVQRLKVQLNMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEESKDRNSGRDGFDFYGGKGRCQKGLNSSRVGGGFRNYCSNGSYERSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGGGGSQSKLNLQPRTLPMNDVKSSKISRTTVRSKSSNPFGMVRPREEVLAEKGHDWKKLDKELKSKIMEVSREKTEKSNAIGKKSFGNGIGQAAEDKIERSWRKPSFNNSRQVGRGAQPDKNPSGFVDANWAGDMNDRCSTRGFCFTGDSIAIS
BLAST of CmaCh09G011570 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.0e-17 Identity = 69/184 (37.50%), Postives = 103/184 (55.98%), Query Frame = 1
BLAST of CmaCh09G011570 vs. Swiss-Prot
Match: ICR2_ARATH (Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16 Identity = 59/147 (40.14%), Postives = 90/147 (61.22%), Query Frame = 1
BLAST of CmaCh09G011570 vs. Swiss-Prot
Match: ICR5_ARATH (Interactor of constitutive active ROPs 5 OS=Arabidopsis thaliana GN=ICR5 PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 4.8e-12 Identity = 44/114 (38.60%), Postives = 82/114 (71.93%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TrEMBL
Match: A0A0A0K4M1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009760 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.2e-31 Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TrEMBL
Match: A0A0A0LDX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.0e-25 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TrEMBL
Match: F6HQZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02400 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.5e-20 Identity = 58/85 (68.24%), Postives = 75/85 (88.24%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TrEMBL
Match: M5VJ47_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007168mg PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.7e-19 Identity = 78/185 (42.16%), Postives = 105/185 (56.76%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TrEMBL
Match: A0A0D2RMH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 8.3e-19 Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-19 Identity = 66/169 (39.05%), Postives = 96/169 (56.80%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TAIR10
Match: AT2G37080.1 (AT2G37080.1 ROP interactive partner 3) HSP 1 Score: 86.7 bits (213), Expect = 3.1e-17 Identity = 59/147 (40.14%), Postives = 90/147 (61.22%), Query Frame = 1
BLAST of CmaCh09G011570 vs. TAIR10
Match: AT3G53350.1 (AT3G53350.1 ROP interactive partner 4) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 44/114 (38.60%), Postives = 82/114 (71.93%), Query Frame = 1
BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|659094279|ref|XP_008447975.1| (PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 4.7e-31 Identity = 92/163 (56.44%), Postives = 111/163 (68.10%), Query Frame = 1
BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|449454189|ref|XP_004144838.1| (PREDICTED: uncharacterized protein LOC101206224 [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 6.1e-31 Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1
BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|700203804|gb|KGN58937.1| (hypothetical protein Csa_3G736850 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1
BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|778683764|ref|XP_011651941.1| (PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1
BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|449440061|ref|XP_004137803.1| (PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |