CmaCh09G007070 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGTTCATCAAGCCTAACAAGGCCGTTGTTGTTCTGCAATGCCGATTCGCTGGTCGGAATGCTGTGATCGTCCGCAGCTTCGATGAATGAACTCGTGACCGACACTACGGCCATTGATTGGTTTCAGGGATTAAAAAGTACCCGAACATGGTAGTTCGTAAAGATTCCACGAAGAAATTGAGAGTGAAGGCATTCATCAAGCTTGTGAACTACTAGCACCTCATGCCGACAAGGTACACGCTTGACGTCGATCTCAAGGACGTGGTTAATGTCGATTGTTTGCAGTCGAAGGGCTCGAAGGTCGCTGCGTCGAAGGAGATCAAAAAGAGATTGGAGAACAGGTGGTTTTTCACTAAGCTTAGGTTCTGACGGTATGATTTCATTTTTTTTTAGAATCTATTTAGAACTATGAATCTCTATGTCCAGTGCGTATGCTACTAAACGTTGTTCGTAGTGTATCCTTTTGGCATTTTATAATTATTAATGTTTTTCCTTTTCATCATGAGATTCCAATGATCGTATGAGAGTTCATTGCTTAGTTGAAACTTGAAATGTTGTGATAACGCAATTCCTCCAATACTTATTTTCAAATACAATGGATTAACACAATAAACAGACCAATAATGGTGGTGTGATAAACAGATATTCATAATACTTGGGCTTATTCAGGAAATGAACAACTACAACTGAGATAACACACTAGCCCCAATTCTTTTTTCATAACCCACTGGAGCATACACTGTAATTCAACACCCACCTTATACATTCATCCAAACAAACCTTTCGACGTTTTCGATTAGACTTGCTTGGTTCGACTACTCCTGTTGAGATTTGAGTTCCTTCACCCTGTCTTCAGTATCCTTCAATGCTTTCCCAAAGATGCTTATAATCTGAAAATAATACCATTTTCAGGATTATAGCAATCAAGTTTCGTATTCTACTCATTAATGCTCACAGGGATGCTCGATTATTCTAATACCAACAAATTTGTATCCCCCCACCCCAAATATCAGTTTGTCTTTCTGGAAGACAATCAATTGATGGAAGGATATGTTGCAACATAATGAGGAGGATGTTAGAATCTGTTTGGTACCTCATCAACTTCTTCAGGTGAGACAATGAGGGCAGGACTCATTGTTATAGTATCCCCGGAAACACGTACTAACATTCCGTGCTTCTCACACATTTCACCAAAATATGCAGCTATCCCTGTATTAAATGGACAGCTTGTTAGAACAAATCTAGAGGCAGTATCCAACCTTCATGTTGTAAGAAACCGTTGAGTTGCTGTGTTCATCAAGTTATTACTCAACATGTTGTAGTTGAGATCTGTCTGTAAAGTGTAGTACTTTTGGTTGCTGATTCCAAAATGGGCATTGAATTTATAAGATGTGTAGTCTTGATAAGATTCAAAAGTCCTTTTAGCGATAGAGTTTAATCCACATGATCAATGATAGAATAGTTGAATGGAAACTCTTGACAACAAAAGGAAAATACCCCATTCAGGAGGAAATGGACTGTTGGGTGATTTGTTGTCTGTGAAGTCTGTGCCTGAAATCAATCCCGTCCCCCTTATCTGCAAAAAGACTAAACAAGTTGACACAAGCAAGCGTATTGGAGTACCAAACAAGAATGAAACAATTACTCGAACTGTTACCTCTCCAATGATGGGGCTGTTACTGAAAGCTTTTATACCATCTTGAAACCTTGGAGAGATGTTATTTACTTGCTCAAGAATATTTCTCTCTCTATTGAAGGGCATTGCACAATATCGAACACCAAAATGTTAAGTTACAGATATATGTCAAAAGATATAAACTGTTAGCCTTGATCAGATAATTAACATTCAAGGTAGTCTTGAGGTTGGTTAACACCTGTTAAAGAAAATTAGAAAAGATTGAAAAGATTAGAGCGTAGATCTTTGGTATAGGCATGAAAAACGTACTTGTAGATCTTCAGTGCTTCAATTGCCACAGCACATGCAACAGGATGTCCAGAATATGTAAATCCATGGGCAAAATTACCTGAACAAAAAGACGATCAATTTGTTCTTACGAAAATCTTTTTGTTTGTGCCATTGCTAACATACCAAGCTTATTGCTTTGAGAGTGTATGACATCTGAAACTTCAGGGCTGGCAATGACAGCGCCAATAGGTACATATGCAGAAGAAAGAGCCTGCAAATTTCAGCGCCAAAAACAGGTATTATATGGAAATATCTTCTTCTTAGGCTATAAACATTAAACAAGCGGTTTTGATTCTTCAATTCAGCTCAACTTCATTTCACCTTAGCTATTGATACCAAGTCTGGCTTAATATTGTATTTATCACATCCGAACATCGTCCCAAGCCTTCCAAAACCACAAATAACCTATGGCAGGGAAGGGGTTATAGGATACTAGGTAAGAGAAGTGAAAGGTATGGAGGCAGTAATATTGTATAACCTCATCTGCAATGAGAAGGACATCATATTTCTTCAGCACAGCTTGGACCTGCTCATAAAATTGAAAATTAGTAAATAATTTTCAACTCTTATTTTCTCTTATTTTGAAAATTTGTGGAATTCTATAAGCACTCAGGGCTGCATCTAAATAAGAAAGTGCAAGCAGTCGATGTTTCAAAGTTGCAAATGAAGTGGCTGCTTACTTTATCAAAATAAGTTGCAGGAGGAAGTATCACACCACCTGATCCAATGACGGGTTCGGCAATAAAGGCAGCAATCTGAAAGAAGCAAAGGTTAGAAATACTAAAGATTTTTTGCATATATAAAATGTTTGAAAGTTCACGTCAGGTTTTGTGGCATTACTGTCTCAGGTCCTTCCTTCAGAATGAGATTCTCTAAATTGTTAGCTAATCTTGATGAGAACTCTTCCTCGGTTTCACCTATCATATTATTGTCACATTTAGCATTTTAAAGGTAATTCTATCAAATTCATTGCCTATAAATTAGGGCAGAGTTCAGTGAGAACCGGGAAGATGATAGCGCCAGTAGTGAGGACAGTCTGTGTGCAGGACAAATGGAACAGGAAGATCAAATTGTTGATGCAAAGCTGGAATCCTACAATAAAATTTCCCTAGTTAATAGGCATTGGCCAAGCAAGTTATTTAAAACTATTTGATGTATTAGGAGAATTTCCTGACAAGATGTCTTTTATAATCTTCTTACCCGGTAAGACTGGCCGCTATAAGTGTGGAACCATGGTACCTGAGATAGCAAACATATCAAGATTTGGATGAGTAAAATGAATGGAGCATGTTTGAACGGAGCATTGGATATTGAACATACCCTTTCAAACGAGAGATGATTTTCTTTTTTTTTGGTCGCCCCAGTGCATTATTATAATACCAAGCCAGTTTTACCTACATGAGTTAGAAAATGATGTTATTCATTTGATTTTACATCAAGCAGCAGAGCACATTGCTGACAAACGTCAATTGAATTGACTTGAAGATTGCAATTATGATCAACGCCTATATAAGGTAAATATCCCAAACTTGTACAGTTACATTCAGTTAAACTGGTCACTGAATCATCTTAAACTAAGGTTTCATATTTACCTCACCTCTTTTCCTTCAGTAGCTGGGTAACAGGTAATTAAATTTTCATGGAGAATTTAACCATTGCATACATAAAATTTGCAAGACGTCATACTGACATGATAACAATGGAGAGTAGAGGTGCAAAAGAGGCACCTGAGAGTCATTTGCTTCTGATCCACTATTTGTAAAGAACACCTTCCCCATTTTCCTTGCTGTAAAAATTTCTAGTATTTCTTTTGCTAGATCCTGCAGGAGACAACGTGATAAAAATGCAGCGAAGGTATGAATTTGTTAGAATATTGCTACACTGAAGTAGCTGATTGTATATTAGTGTCTTTATTTGTGATTCAACCTCGGAACATCTTCAAGTTTTTATTTTTTTACTTTTCTTTTGAGATTAATTCTTTTCTGACTGTGTTTGGTATCTTTATTACTGAACTTTCATGTCATGACATCAAAGTGTAAGAATTTTTAGTAGCTTTATTCTGAGAAGTTAATATAATACCAGAGATGGCTTTGTTGTGCGATTCCAAAACGAATGATAAAATGGCAGGGTATTCAGTTGAGCGGTGGCAGCAGCAACAAGCCGAGGCTCACTTCCCCCTGCAGATGATCCAATATTCATATGCAACTCGAAACACATGAATTGCGATTGAATAAGATTTTCACTGCATACAGACTACGGGTACGTCTCTAATGTTGTATTCCTATTTCATAGTCCCCTGTTGTATTCACCATGTTTTTCAAGAGCATGCCCATATATTTAGCCTCAGTAAGCTTTTCTAGACTCCTTAACTTGCTAAGAATAATTTCAGTATTCCCAACTCTTAAATTTTATCCTAATAAAGTTAAATGTGTCTTAAAACACAGTTTCTCCTGATTTTAAAACAGAGCCTGCATGGAATTGAACATGGTCTGTATTTTCACATTGTTTGAAATAAAAAACAGATTATGATACCTGAAATCGTTATAGCACACATACACACACATGAGAAAGTTGACACGACTAATAAAGAAACCAAACATAAACATATGCTTGACAGTCCTTTGATAGTTACATAGCTGCATACAGTAACATTGAGTTTAGAACTCTTAAGAGAGCCATAAGATCGAGAAAAATCATGCGAGAAAAATATCAAGACATAAAAAACAATTATATACTTAAGATAGTAAAAATACCCAAGGATGTGGACCATAAACCAGCCAGGGAGTCGAGATATTTCTTCCCGTTAATGTCATAAACATAGGAACCCTGCAGCCATGATAAATTACCATAACCAAACCAATATTTTTCCAGATATAAACCGATCGAGAAAGCTTAAATCCTTGTGGGTTTGAAAAGTGGCCAGGTATACCTCAGATTTTTCTATGACCAAAGGATTCACATCAGCAATCTGCCAACCAGGCGTGAAAGGAGCAATCATACCATGGCCTTTGAAACTGGGATTTCAGATGTCAAATATGTGAGATTTCATATAATTTCAAATTGAAAATGGTTTGGATGGATGAATATACATGCTGATGTACAGAAAAGGAAATTTTAGGAGGTTCGGGAAGGAAGGCGTTTTTGAAATTTAAAATTTTGTCACAGATGCTCCAAGTTACCCTTGACCATTTCTTGAATCAGTAGTCCAATTATCCCTTTCCAATGATGCTTCGGTACCGTACGGCTGGGTTAGTAATTGAATCTGAGCGAGCCGCTCACTAGAAGTTCTAAAAGCAGCAACATCTTTTGCAGATGAACCAAGCTGGAAAGGATTAAGATGCATAAGTTCATAAGGAATAACATTAAACTTCCCTAAAACATCCAATCAGAGAAAACAAGCTTGTTGTATGGGGGGACATTCTGAACCTCACTTTAATAGTTACCCTTGACCCCACTGCCCAAAGCAAACTCGTTCGGGGTCGTTTTATTCTTTCGTGAGAACACCAAGCCCCCAAACATGGCTAAATTACAAAAGATGAGAACACCAAGCCCCCAAACATGGCTAAATTACAAAAGATATCCCACTACATTGCCATTTATTTCAAAAATACTTTTATTTTTTCAAAATTCTTAGCCTTTATAAACGTTAAAAAAAAAAATACTATAAAAATGATGGACGAAAGGACGACGTATTTGAATGTCTTTCTCTTCGACTTAATCCAAGAAATCAAATCTCTAACTATGGAGTACAACAACCCACCATTAGAAAACACTATAAACGTAATTAGCAGTTAAGTCAACAAACTTGCTCGGTGTTAAACACTAGCGAGAACAAAACAGACAGATATCGGGTCAATCAAAATATGGAAGAGGAAGAAGAAGATGAAAGATAGTCAGATTTGCAAAAAAGGTAGTGATGATCTGAAACCTTGTGTTTGATAATCGTACGAAGCAAATGGTTGAAGCCCATTTCTTCTGGTTCAAGGTGAAGCAAAAAATAATGGAGAACTGATATAAGAAGCAAAGGAAGAGGAGTAGAGTGAGGCAGCACTGGGACTGATGAGCACACTTTAAAGTAGTACTAGAACTCCACTCAATAATGGAGTTGCTGTTAGTTACTGTTTTTCTTTTTAAAAGTTTGCGACACCATTATTATTATTTCGTCCTATTCTGGTCTTTGCTCTTATGTTTTTATTCAAACCTTTTCTCTATACTACAAAGTACACAAAAACAAAATAAAATACGCCGTACTTCGTTTCAATAATATCTTTCACTCGTGGTTACGTTTTAAGTTTGAGTTAAAATGTTTGCAGTATATCCCAAATCTCGCAAACGACTTCTGCAATGCAGCAAGAGCACAGAGTCTCGAGAAAGAAGATAGAAAACCAGAGGAAGAACATACCACCGCCACAACGGGAGTGAAGGACCATCTCCGACTCGTTACAGCAGAGATGTTCTTCACCGGCTCAAGAAACTACCGGTTTGTCCAATGAGCACGGTGATCGGCAGAAAGAATTCAAATCAATGGTGGGGAAAAATGTACTTTTTTGGCTGATTGAGTTCTGAAAGCACAGACTGATGCTGCTGCTGCTTAGAAAATGAAACACTTAAGGGAAAAACTGAAAAAAGAAAGCAACTACGAAACTTTAGTCCTTAATTCCCAAGAAGTTGGAGGCTTTCTTCATTGTCGTCTCGCCGAAGTCACCGTCGATATCTCTACTGTGAAGAACGTCCCGTCTTTGCAGGTAGAAAATTTCTTGTTTGAATTCATCAAGAATTTGCAGAGGAAAAAAGATTTACATTTTCTATCCAAAAGTTAAACAGTGAAGGTGATGATATTTTAAGTTAACTATGTTTTGATAATAAAAAATTAAGATAATTAATAAGATGTGATATAAAGTTTTAG GAGAGTTCATCAAGCCTAACAAGGCCGTTGTTGTTCTGCAATGCCGATTCGCTGGTCGGAATGCTGTGATCGTCCGCAGCTTCGATGAATGAACTCGTGACCGACACTACGGCCATTGATTGGTTTCAGGGATTAAAAAGTACCCGAACATGGTAGTTCGTAAAGATTCCACGAAGAAATTGAGAGTGAAGGCATTCATCAAGCTTGTGAACTACTAGCACCTCATGCCGACAAGGTACACGCTTGACGTCGATCTCAAGGACGTGGTTAATGTCGATTGTTTGCAGTCGAAGGGCTCGAAGGTCGCTGCGTCGAAGGAGATCAAAAAGAGATTGGAGAACAGGAGACAACGTGATAAAAATGCAGCGAAGTATATCCCAAATCTCGCAAACGACTTCTGCAATGCAGCAAGAGCACAGAGTCTCGAGAAAGAAGATAGAAAACCAGAGGAAGAACATACCACCGCCACAACGGGAGTGAAGGACCATCTCCGACTCGTTACAGCAGAGATGTTCTTCACCGGCTCAAGAAACTACCGGTTTGTCCAATGAGCACGGTGATCGGCAGAAAGAATTCAAATCAATGGTGGGGAAAAATGTACTTTTTTGGCTGATTGAGTTCTGAAAGCACAGACTGATGCTGCTGCTGCTTAGAAAATGAAACACTTAAGGGAAAAACTGAAAAAAGAAAGCAACTACGAAACTTTAGTCCTTAATTCCCAAGAAGTTGGAGGCTTTCTTCATTGTCGTCTCGCCGAAGTCACCGTCGATATCTCTACTGTGAAGAACGTCCCGTCTTTGCAGGTAGAAAATTTCTTGTTTGAATTCATCAAGAATTTGCAGAGGAAAAAAGATTTACATTTTCTATCCAAAAGTTAAACAGTGAAGGTGATGATATTTTAAGTTAACTATGTTTTGATAATAAAAAATTAAGATAATTAATAAGATGTGATATAAAGTTTTAG ATGCCGACAAGGTACACGCTTGACGTCGATCTCAAGGACGTGGTTAATGTCGATTGTTTGCAGTCGAAGGGCTCGAAGGTCGCTGCGTCGAAGGAGATCAAAAAGAGATTGGAGAACAGGAGACAACGTGATAAAAATGCAGCGAAGTATATCCCAAATCTCGCAAACGACTTCTGCAATGCAGCAAGAGCACAGAGTCTCGAGAAAGAAGATAGAAAACCAGAGGAAGAACATACCACCGCCACAACGGGAGTGAAGGACCATCTCCGACTCGTTACAGCAGAGATGTTCTTCACCGGCTCAAGAAACTACCGGTTTGTCCAATGA MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKNAAKYIPNLANDFCNAARAQSLEKEDRKPEEEHTTATTGVKDHLRLVTAEMFFTGSRNYRFVQ
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 1
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07 Identity = 31/46 (67.39%), Postives = 32/46 (69.57%), Query Frame = 1
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0L310_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G618420 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.4e-11 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0K3A4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_7G209560 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.5e-11 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TrEMBL
Match: Q9MAV8_PANGI (60S ribosomal protein L27 OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-07 Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0KVB4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G062360 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-07 Identity = 33/46 (71.74%), Postives = 35/46 (76.09%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0KXF9_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G061860 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.1e-07 Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TAIR10
Match: AT4G15000.1 (AT4G15000.1 Ribosomal L27e protein family) HSP 1 Score: 57.0 bits (136), Expect = 8.3e-09 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TAIR10
Match: AT3G22230.1 (AT3G22230.1 Ribosomal L27e protein family) HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1
BLAST of CmaCh09G007070 vs. TAIR10
Match: AT2G32220.1 (AT2G32220.1 Ribosomal L27e protein family) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-07 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|778695465|ref|XP_004145994.2| (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 4.9e-11 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 1
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|659129420|ref|XP_008464678.1| (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo]) HSP 1 Score: 75.9 bits (185), Expect = 4.9e-11 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 1
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|778725645|ref|XP_011658974.1| (PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 6.4e-11 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|702320778|ref|XP_010052670.1| (PREDICTED: 60S ribosomal protein L27-like [Eucalyptus grandis]) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08 Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 1
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|658043732|ref|XP_008357506.1| (PREDICTED: 60S ribosomal protein L27-like [Malus domestica]) HSP 1 Score: 66.2 bits (160), Expect = 3.9e-08 Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |