CmaCh08G004370 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAGGTTTCAAGCTCTTTCACACCCTTTTCTTATTGATGGCTTTGCAATGTTGTGCGAAGGTGGGTGCCACTTTTGGTGATGTCACTGGTGACGTCAATCTCGACAGTCAATTTTCATTTCGTGCATTTGGATTACATGACACACAAGCCCCAACTATTGCTCCAATTGGAAGTAGCACACAAGTCTCAGCGGCTACATCAGTTGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGTTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCGGAGGGGGATACGTCGGGCGCTGAAACCCCCGAGGGGGCTCCTCCGTCGGTCGGAAGCGCAGCTGAAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACNGAAGCGCTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGTAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAGACCCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGANNGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCATCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGAGCTGCGTCGGTCGGAAGCATTGCTGAAACCCCAAAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGTGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGAAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGGCCGAAAGCATTGCTGAAACCCAAGACCCGACAGAAGTTGAANGCATTGGAGGTTTCTTTGGCTAATAACAAGGCAAAACCTAGCCAAACTCATTATTTTGTAAACAAATTCATTATTTCTATATATTTTTTTTCTTAAACGGAATGATTTTCCTATATTTTCTCATATTTAATTTTCTATCTTAATTCATGAGTATGAGATAATATTACTTATATTCTAAGTAGGCCTTTATTAATTGCACAATGAAGGGTGAGTTGGCGAGTTCTCTACCGTCCCTATATGGTAACAACATCATACTATGGGCTAACAACATCATACTGTATGATATTGATTACATTATCTAATGCACAACCTAAACCCTAACTTGACATGGTATCTAGCATATCCTATTTGTAAATCAGACAATATAATAGTTTCTCATGGTCCCAAAACTACGAAGCATTGCTCAAACCCAAACCTCCTAAATTCCAGAGGGTGCAACAGTAACACACCTTTTATCTACGAAAGTACCATGGATAGCTTATTAGGGCTTAAACAACACAACAATTAGTCATCCATAGATGTCATAAAGGTTATCTAGGTTTTTAGAGAGTCTAGGCAGCTTAAATCTCATCTCACATTCAGGACATTTGAGACTATCATACTTTGCTTTCTAGGAGCACTAAGGTCTTGATCATTGATTGTCACTCACGATCCTAGAGTGCTCGATCTACGACCTAGGTCAATGTGGAACTACCCCAACTCAAGCACCCTAAACTTAACTTGGTTCATTTATGCATGCTTGGTTAAAGAGATAATTTTATTGATCACCTAAAGCACGGAATTCATAATTTAATCAATCATGCAAGCTAAATAGGGAGAAAACATTCATCAATCACTCGGGAGCACATATCCCAATATCGTATCCTCCTTTCTAGCACAACATAGAGAAAACTTAATAGGTAGCACAACATGCATCATAAAAATATTAACATAGGGGTATTTTTGTAATTTTTCATAATTCTATCACGGAATTCACAATCTAATCAATCATGCAAGCTTAATAGATAGAAAACCTCCATTAATATTGAGAGCACAATCCCAACATTGTATCCTCCTTTCTAGCACGTCAGAGAATTAAAAACAACATGCATCATAAAAATATTAACATAGGGGTATTTTCGTAATTTTTCATAGCATATATTGTATTATGATCCAAAATTATCCCAGCGATCCCTATAATTAATTCTTGATCCAAAAAAGTCTAAATGGCTAATTACTTGGACGACCTACTTCTACAACAATATTATATAACAATATTGACTTTATTATATAAAATAATAATCAATTTATTACATATCAAAGCAAGAGAGGTTAGCAATTATATGTTTTTGTTTAAAATTATTATTACTATTTTACCAAAAAAAATAATAATGATAAGAAAATAATAGATTCAAAGTTTTATTGAAAATTCTAAGTAAAAATATGAACATAAACTAAAATGGAATGAGCCTAAAAAAATATCAATTTAATTTTTTACAAATAAACTTATTAGATAATAAAAAATAATTATAATTTATATCCCTAATAATTGAGTTGGAATGCATATTAAATATTAAATCTATATTTAGGGTTAAATATACAGTCAAACCTTCTATATTTAGAATACTCTAAAATACACCAAATTTGCAAGCCTCTCTAAATTGGTTGGTCTTTTCTAAATATAGTTGCCCATTAAACTATATATATATAGTTTCCCATTATCAGAAATATTCAAACACCCACATCTTCATCCTTGCTAATAATCATCATTTGTGAAACGAGTTTGTGACTCTACAACTTAGACAGTTCACCATGGCCACCGCGAAAGGTTTTGATTTCTTTCACGCCCTTTTCTTGGTGATTGCTTTGCAATGTTGTGTGAAGGTAGGTGCCACTTTTGGCGATGTCACTGGTGATGTCAATGTTGATCGTCCATTTTCATATCATACATTTGGAACACAAGTCCCAGCAGCTGCACCTTCTGAGGGTGCTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGTGTTGCATCGGGTGGGAGCATTGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGGGTTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGGACTGTGCCAGTTGGGAGCATCGCTGAGACTCCGGAGGGGGCTGCGCCAGTTGGGAGCAACGCTCAAACCCCAACGAGTAAACCAATTGAAAGTAGCACAGAAGCCCCCACACCAATTGGGAGCAGTTGA ATGGCGAAAGGTTTCAAGCTCTTTCACACCCTTTTCTTATTGATGGCTTTGCAATGTTGTGCGAAGGTGGGTGCCACTTTTGGTGATGTCACTGGTGACGTCAATCTCGACAGTCAATTTTCATTTCGTGCATTTGGATTACATGACACACAAGCCCCAACTATTGCTCCAATTGGAAGTAGCACACAAGTCTCAGCGGCTACATCAGTTGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGTTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCGGAGGGGGATACGTCGGGCGCTGAAACCCCCGAGGGGGCTCCTCCGTCGGTCGGAAGCGCAGCTGAAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACNGAAGCGCTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGTAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAGACCCCGGAGGGGGCTGCCATTGCTGAAACCCCGGAGGGGGCTGCATCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGAGCTGCGTCGGTCGGAAGCATTGCTGAAACCCCAAAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGTGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGAAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGGCCGAAAGCATTGCTGAAACCCAAGACCCGACAGAAGTTGAANGCATTGGAGGTGCCACTTTTGGCGATGTCACTGGTGATGTCAATGTTGATCGTCCATTTTCATATCATACATTTGGAACACAAGTCCCAGCAGCTGCACCTTCTGAGGGTGCTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGTGTTGCATCGGGTGGGAGCATTGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGGGTTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGGACTGTGCCAGTTGGGAGCATCGCTGAGACTCCGGAGGGGGCTGCGCCAGTTGGGAGCAACGCTCAAACCCCAACGAGTAAACCAATTGAAAGTAGCACAGAAGCCCCCACACCAATTGGGAGCAGTTGA ATGGCGAAAGGTTTCAAGCTCTTTCACACCCTTTTCTTATTGATGGCTTTGCAATGTTGTGCGAAGGTGGGTGCCACTTTTGGTGATGTCACTGGTGACGTCAATCTCGACAGTCAATTTTCATTTCGTGCATTTGGATTACATGACACACAAGCCCCAACTATTGCTCCAATTGGAAGTAGCACACAAGTCTCAGCGGCTACATCAGTTGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGTTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCGGAGGGGGATACGTCGGGCGCTGAAACCCCCGAGGGGGCTCCTCCGTCGGTCGGAAGCGCAGCTGAAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACNGAAGCGCTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGTAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAGACCCCGGAGGGGGCTGCCATTGCTGAAACCCCGGAGGGGGCTGCATCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGAGCTGCGTCGGTCGGAAGCATTGCTGAAACCCCAAAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGTGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGAAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGGCCGAAAGCATTGCTGAAACCCAAGACCCGACAGAAGTTGAANGCATTGGAGGTGCCACTTTTGGCGATGTCACTGGTGATGTCAATGTTGATCGTCCATTTTCATATCATACATTTGGAACACAAGTCCCAGCAGCTGCACCTTCTGAGGGTGCTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGTGTTGCATCGGGTGGGAGCATTGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGGGTTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGGACTGTGCCAGTTGGGAGCATCGCTGAGACTCCGGAGGGGGCTGCGCCAGTTGGGAGCAACGCTCAAACCCCAACGAGTAAACCAATTGAAAGTAGCACAGAAGCCCCCACACCAATTGGGAGCAGTTGA MAKGFKLFHTLFLLMALQCCAKVGATFGDVTGDVNLDSQFSFRAFGLHDTQAPTIAPIGSSTQVSAATSVGSIVETPEGDTSVGSVAETPKEDTSVGSAAETPEGDTSGAETPEGAPPSVGSAAETPEGAPSASAGSIVETPEGDTSVGSAAETPEGDTSVGSAAETPEEDTSDGSAAETPEEDTSDXSAAETPKEDTSVGSAAETPEGDTSVGSTAETPEGDTSVGSTAETPEGDTSVGSTAETPEGDTSVGSTAVTPEGAPSASAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASAGSIAETPEGAAIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASVGSIAETPKGAASAGSIAETPEGAVSAGSIAETPEGAASISAESIAETPEGAASAESIAETQDPTEVEXIGGATFGDVTGDVNVDRPFSYHTFGTQVPAAAPSEGAASGGSIAETPEGVASGGSIAETPEGAASSGSIAETPEGAASSGSIAETPEGVASGGSIAETPEGTVPVGSIAETPEGAAPVGSNAQTPTSKPIESSTEAPTPIGSS
BLAST of CmaCh08G004370 vs. Swiss-Prot
Match: K0754_HUMAN (Uncharacterized protein KIAA0754 OS=Homo sapiens GN=KIAA0754 PE=2 SV=4) HSP 1 Score: 56.2 bits (134), Expect = 1.4e-06 Identity = 136/398 (34.17%), Postives = 175/398 (43.97%), Query Frame = 1
BLAST of CmaCh08G004370 vs. TrEMBL
Match: A0A0R1LFJ4_9LACO (Uncharacterized protein OS=Lactobacillus acidifarinae DSM 19394 GN=FD25_GL000973 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 8.8e-19 Identity = 191/566 (33.75%), Postives = 259/566 (45.76%), Query Frame = 1
BLAST of CmaCh08G004370 vs. TrEMBL
Match: B7PSP1_IXOSC (Putative uncharacterized protein (Fragment) OS=Ixodes scapularis GN=IscW_ISCW019314 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-10 Identity = 80/190 (42.11%), Postives = 80/190 (42.11%), Query Frame = 1
BLAST of CmaCh08G004370 vs. TrEMBL
Match: A0A0E3K2B9_CLOSL (Uncharacterized protein OS=Clostridium scatologenes GN=CSCA_3545 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.4e-10 Identity = 117/323 (36.22%), Postives = 140/323 (43.34%), Query Frame = 1
BLAST of CmaCh08G004370 vs. TrEMBL
Match: A0A0F7US61_TOXGV (RPGR, putative OS=Toxoplasma gondii (strain ATCC 50861 / VEG) GN=BN1205_052100 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.7e-09 Identity = 86/226 (38.05%), Postives = 109/226 (48.23%), Query Frame = 1
BLAST of CmaCh08G004370 vs. TrEMBL
Match: A0A0A0K5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398750 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-07 Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 1
BLAST of CmaCh08G004370 vs. NCBI nr
Match: gi|948664425|gb|KRK94152.1| (hypothetical protein FD25_GL000973 [Lactobacillus acidifarinae DSM 19394]) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 191/566 (33.75%), Postives = 259/566 (45.76%), Query Frame = 1
BLAST of CmaCh08G004370 vs. NCBI nr
Match: gi|237841351|ref|XP_002369973.1| (hypothetical protein TGME49_021440 [Toxoplasma gondii ME49]) HSP 1 Score: 79.7 bits (195), Expect = 2.0e-11 Identity = 90/231 (38.96%), Postives = 114/231 (49.35%), Query Frame = 1
BLAST of CmaCh08G004370 vs. NCBI nr
Match: gi|692119423|ref|WP_032075688.1| (hypothetical protein [Clostridium drakei]) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10 Identity = 124/338 (36.69%), Postives = 146/338 (43.20%), Query Frame = 1
BLAST of CmaCh08G004370 vs. NCBI nr
Match: gi|241570437|ref|XP_002402798.1| (conserved hypothetical protein [Ixodes scapularis]) HSP 1 Score: 75.1 bits (183), Expect = 4.8e-10 Identity = 80/190 (42.11%), Postives = 80/190 (42.11%), Query Frame = 1
BLAST of CmaCh08G004370 vs. NCBI nr
Match: gi|656211368|ref|WP_029160785.1| (hypothetical protein [Clostridium scatologenes]) HSP 1 Score: 74.7 bits (182), Expect = 6.3e-10 Identity = 117/323 (36.22%), Postives = 140/323 (43.34%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |