CmaCh05G010060 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTTCTACTGGAGCAAGCAGGTGACGCTCCTGATCGATTCATGGCGGACAAATTCATGGCTAAGTTATTCCCTCTCCTTGCTTGCTTGCTTCATCGTTTCCGTTTTCTACCAGTATTTGGAGAGCTATCGCATCCGTTTGAAGCTTCTTTCATGTCGGAAACCGTCGCCATCGGAGATCGAGGTTCCTCTCCTTCGATCTAAAGTGGCTGGTAAGTGGACGGCTGTGAAATTTGCAGAATCTCTGTTTTTCGGAGTCAACTCGGCGATAGGTTACCTTCTGATGCTCGCGGTCATGTCCTTTAATGGTGGAGTTTTCGTTGCGATTGTGTTAGGGCTTGCGTTTGGTTATTTGGCGTTTAGGAGTGATGATGAGGATTTCAGTGTTAGCTTTGAAAATCCATGTGCCTGTGCTTAGTTCTTCCTCAGTATTGCGAATCAGATGAAAGCTGAATGAAAAGTAATTGCTGAATCTGCTCCTTTCAGATACGAATCGGTTTCTTGCATTGTCTTATTAGATCTGTTTCTTTTCATTTCTTGCTAAATTGATTGGCCGTTTACTTCAATTTCTGCAGATCTGTTTGGATGTTTTGTGGTTAGATAATTTGTGCATAAACGGGGTAAAATATTGTGATTCGTCTGTCAAATTGTGGAAAATTTCAATTAGGGGGAGAAACTCTACTGTTTGATTATGATCCTTTTTGTTCTTTTGTTTATCAATTTCGATTTGCAGTTTGACAGATAAGATGTCTGAAAATGACTCCATAAATCCTTAA ATGACCTTCTACTGGAGCAAGCAGGTGACGCTCCTGATCGATTCATGGCGGACAAATTCATGGCTAAGTTATTCCCTCTCCTTGCTTGCTTGCTTCATCGTTTCCGTTTTCTACCAGTATTTGGAGAGCTATCGCATCCGTTTGAAGCTTCTTTCATGTCGGAAACCGTCGCCATCGGAGATCGAGGTTCCTCTCCTTCGATCTAAAGTGGCTGATAAGATGTCTGAAAATGACTCCATAAATCCTTAA ATGACCTTCTACTGGAGCAAGCAGGTGACGCTCCTGATCGATTCATGGCGGACAAATTCATGGCTAAGTTATTCCCTCTCCTTGCTTGCTTGCTTCATCGTTTCCGTTTTCTACCAGTATTTGGAGAGCTATCGCATCCGTTTGAAGCTTCTTTCATGTCGGAAACCGTCGCCATCGGAGATCGAGGTTCCTCTCCTTCGATCTAAAGTGGCTGATAAGATGTCTGAAAATGACTCCATAAATCCTTAA MTFYWSKQVTLLIDSWRTNSWLSYSLSLLACFIVSVFYQYLESYRIRLKLLSCRKPSPSEIEVPLLRSKVADKMSENDSINP
BLAST of CmaCh05G010060 vs. Swiss-Prot
Match: COP51_ORYSJ (Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 5.2e-13 Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1
BLAST of CmaCh05G010060 vs. Swiss-Prot
Match: COPT5_ARATH (Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-12 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1
BLAST of CmaCh05G010060 vs. Swiss-Prot
Match: COP52_ORYSJ (Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica GN=COPT5.2 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.1e-08 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1
BLAST of CmaCh05G010060 vs. TrEMBL
Match: A0A0A0KIJ7_CUCSA (Copper transporter OS=Cucumis sativus GN=Csa_6G361380 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.9e-27 Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = 1
BLAST of CmaCh05G010060 vs. TrEMBL
Match: G7J942_MEDTR (Ctr family copper transporter OS=Medicago truncatula GN=MTR_3g105330 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.4e-19 Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 1
BLAST of CmaCh05G010060 vs. TrEMBL
Match: I3S402_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-18 Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 1
BLAST of CmaCh05G010060 vs. TrEMBL
Match: A0A151RSY0_CAJCA (Copper transporter 1 OS=Cajanus cajan GN=KK1_032851 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.9e-18 Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 1
BLAST of CmaCh05G010060 vs. TrEMBL
Match: I1K8H9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G057400 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.8e-18 Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of CmaCh05G010060 vs. TAIR10
Match: AT5G20650.1 (AT5G20650.1 copper transporter 5) HSP 1 Score: 73.6 bits (179), Expect = 6.5e-14 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1
BLAST of CmaCh05G010060 vs. NCBI nr
Match: gi|659089507|ref|XP_008445546.1| (PREDICTED: copper transporter 5.1 [Cucumis melo]) HSP 1 Score: 132.5 bits (332), Expect = 3.4e-28 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 1
BLAST of CmaCh05G010060 vs. NCBI nr
Match: gi|449452941|ref|XP_004144217.1| (PREDICTED: copper transporter 5.1 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-26 Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = 1
BLAST of CmaCh05G010060 vs. NCBI nr
Match: gi|1009134577|ref|XP_015884523.1| (PREDICTED: copper transporter 5.1-like [Ziziphus jujuba]) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19 Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of CmaCh05G010060 vs. NCBI nr
Match: gi|357465895|ref|XP_003603232.1| (Ctr family copper transporter [Medicago truncatula]) HSP 1 Score: 102.1 bits (253), Expect = 4.9e-19 Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 1
BLAST of CmaCh05G010060 vs. NCBI nr
Match: gi|388493856|gb|AFK34994.1| (unknown [Lotus japonicus]) HSP 1 Score: 99.8 bits (247), Expect = 2.4e-18 Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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