CmaCh04G019890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTCTCCGTAATTCGAGTGAGATTGTCATGGTGCAAAAGCAGATATGGTCTGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGTAGAAACTAATCGAGCTTTGTTTGATCTCCCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCCCGGGATGCGATCCTTAATAGTCCACTGTTGGCGGAAGCCAATGTTCTGGGGTCCCGGGGAGTCATTCTAACTGAAACAAGGGGTGGGTCTTTACCAACTTTCAAATATTCGCGATTTGAGGGAAGCCAAAAAAAACCTCACGAACCAAGGGATTGAGCAGCGCGAAAACCACGATCAGACTCTATCTAATAAGGGCGTATTAGAGTGGCGTTAGCGCCCCCTTCCCCTTACCCCTAAACAAAAAGGTTTTTCAGAAAGTTGTCTATGCCTTTTGAAAACCTGACTAATAATAATAATCAAGGGCAAAATGCGCTCAAACAACCAACCTATCTGACTAATAGGAAGAAAGAAAGAAAGGGCCCTATCTAAGCTCTCTCGTTGTAAAGCTATAGCTAAAAAGCTGGCCTTACCTTCTATGTTTGTTATTAGTAAAGCCTAAAGCCCTTGACTAATAGAAAGAGATTTTCTTGCTTGTTTAGTAAAATCACGCTTTTCATTTTGATAGGAGTAGATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAAC GTCTCCGTAATTCGAGTGAGATTGTCATGGTGCAAAAGCAGATATGGTCTGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGTAGAAACTAATCGAGCTTTGTTTGATCTCCCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCCCGGGATGCGATCCTTAATAGTCCACTGTTGGCGGAAGCCAATGTTCTGGGGTCCCGGGGAATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAAC ATGGTGCAAAAGCAGATATGGTCTGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGTAGAAACTAATCGAGCTTTGTTTGATCTCCCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCCCGGGATGCGATCCTTAATAGTCCACTGTTGGCGGAAGCCAATGTTCTGGGGTCCCGGGGAATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAAC MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGMLAGAGHSSFFIRN
BLAST of CmaCh04G019890 vs. Swiss-Prot
Match: NU1M_CITLA (NADH-ubiquinone oxidoreductase chain 1 OS=Citrullus lanatus GN=ND1 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.2e-27 Identity = 63/70 (90.00%), Postives = 63/70 (90.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. Swiss-Prot
Match: NU1M_PETHY (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida GN=ND1 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.9e-19 Identity = 51/71 (71.83%), Postives = 55/71 (77.46%), Query Frame = 1
BLAST of CmaCh04G019890 vs. Swiss-Prot
Match: NU1M_ARATH (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana GN=ND1 PE=2 SV=4) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-16 Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. Swiss-Prot
Match: NU1M_OENBE (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana GN=ND1 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-16 Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. Swiss-Prot
Match: NU1M_WHEAT (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum GN=ND1 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-16 Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TrEMBL
Match: G7KDW1_MEDTR (NADH-quinone oxidoreductase protein OS=Medicago truncatula GN=MTR_5g040110 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.1e-28 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TrEMBL
Match: R4ITZ7_VICFA (NADH-ubiquinone oxidoreductase chain 1 OS=Vicia faba PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.1e-28 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TrEMBL
Match: A0A072THI4_MEDTR (NADH-quinone oxidoreductase protein OS=Medicago truncatula GN=MTR_0082s0280 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.1e-28 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TrEMBL
Match: A0A0U1YJ57_BRANI (NADH-ubiquinone oxidoreductase chain 1 OS=Brassica nigra GN=orf128 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-27 Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TrEMBL
Match: A0A088BG09_ERUSA (NADH-ubiquinone oxidoreductase chain 1 OS=Eruca sativa GN=orf128 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-27 Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TAIR10
Match: ATMG01120.1 (ATMG01120.1 NADH dehydrogenase 1B) HSP 1 Score: 92.4 bits (228), Expect = 1.4e-19 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TAIR10
Match: ATMG00516.1 (ATMG00516.1 NADH dehydrogenase 1C) HSP 1 Score: 92.4 bits (228), Expect = 1.4e-19 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. TAIR10
Match: ATMG01275.1 (ATMG01275.1 NADH dehydrogenase 1A) HSP 1 Score: 92.4 bits (228), Expect = 1.4e-19 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 1
BLAST of CmaCh04G019890 vs. NCBI nr
Match: gi|357486887|ref|XP_003613731.1| (NADH-quinone oxidoreductase protein [Medicago truncatula]) HSP 1 Score: 132.1 bits (331), Expect = 4.5e-28 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmaCh04G019890 vs. NCBI nr
Match: gi|1012265635|ref|XP_015947279.1| (PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like [Arachis duranensis]) HSP 1 Score: 131.7 bits (330), Expect = 5.9e-28 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmaCh04G019890 vs. NCBI nr
Match: gi|922326899|ref|XP_013442842.1| (NADH-quinone oxidoreductase protein [Medicago truncatula]) HSP 1 Score: 131.7 bits (330), Expect = 5.9e-28 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
BLAST of CmaCh04G019890 vs. NCBI nr
Match: gi|992329707|ref|YP_009228089.1| (hypothetical protein BniMp019 (mitochondrion) [Brassica nigra]) HSP 1 Score: 129.4 bits (324), Expect = 2.9e-27 Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1
BLAST of CmaCh04G019890 vs. NCBI nr
Match: gi|57013929|ref|YP_173402.1| (hypothetical protein NitaMp056 [Nicotiana tabacum]) HSP 1 Score: 128.6 bits (322), Expect = 5.0e-27 Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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