CmaCh04G011500 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAGCCTCAAGGGCGGAGAGCATCGAAAGCAGTGATACAAAGTTTCCAGGTCTACAACTTCCCGTTTCGAAAATCATCACCATGGCTCTGATTCCAAGCATTTTCGGTGGGCGACGGAGCAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCAAGCTCTCTGGCCAACGTGCCTTCCTCTGCTTCTGCCAACACCCGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCAGATCTTCCGGGGATTAAGAAGGAGGAAGTAA ATGGCTGAAGCCTCAAGGGCGGAGAGCATCGAAAGCAGTGATACAAAGTTTCCAGGTCTACAACTTCCCGTTTCGAAAATCATCACCATGGCTCTGATTCCAAGCATTTTCGGTGGGCGACGGAGCAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCAAGCTCTCTGGCCAACGTGCCTTCCTCTGCTTCTGCCAACACCCGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCAGATCTTCCGGGGATTAAGAAGGAGGAAGTAA ATGGCTGAAGCCTCAAGGGCGGAGAGCATCGAAAGCAGTGATACAAAGTTTCCAGGTCTACAACTTCCCGTTTCGAAAATCATCACCATGGCTCTGATTCCAAGCATTTTCGGTGGGCGACGGAGCAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCAAGCTCTCTGGCCAACGTGCCTTCCTCTGCTTCTGCCAACACCCGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCAGATCTTCCGGGGATTAAGAAGGAGGAAGTAA MAEASRAESIESSDTKFPGLQLPVSKIITMALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSASANTRRRPQKPTSSRQIFRGLRRRK
BLAST of CmaCh04G011500 vs. Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.8e-12 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 1
BLAST of CmaCh04G011500 vs. Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 1
BLAST of CmaCh04G011500 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.8e-11 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of CmaCh04G011500 vs. Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 1
BLAST of CmaCh04G011500 vs. Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-10 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.8e-15 Identity = 47/67 (70.15%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.8e-15 Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TrEMBL
Match: A0A068LK94_TOBAC (HSP17.6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.0e-14 Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TrEMBL
Match: A0A0A0KSB4_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190550 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 8.7e-14 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TrEMBL
Match: A0A068VGB2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009480001 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-13 Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 65.5 bits (158), Expect = 2.1e-11 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2) HSP 1 Score: 65.5 bits (158), Expect = 2.1e-11 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07 Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 1
BLAST of CmaCh04G011500 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07 Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 1
BLAST of CmaCh04G011500 vs. NCBI nr
Match: gi|659129898|ref|XP_008464901.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-15 Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 1
BLAST of CmaCh04G011500 vs. NCBI nr
Match: gi|698554985|ref|XP_009770368.1| (PREDICTED: 17.8 kDa class I heat shock protein-like [Nicotiana sylvestris]) HSP 1 Score: 88.6 bits (218), Expect = 6.6e-15 Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 1
BLAST of CmaCh04G011500 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]) HSP 1 Score: 88.2 bits (217), Expect = 8.6e-15 Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 1
BLAST of CmaCh04G011500 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-14 Identity = 47/67 (70.15%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of CmaCh04G011500 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus]) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-14 Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |