CmaCh04G009090 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G009090
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionFiber protein Fb34
LocationCma_Chr04 : 4725833 .. 4727398 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCTTTTTTTTTCTTTTTTTCTTTTATAGAATTTTAGAACACATATCTGAGATACCTTAATCCTCTGTTTGGTTTAAAGATAGATAGATAGATAGCAGAGTAGAAAAGGGTTGAAGAACGCTGAGATAAACAGATCTGCGAAGCTCTGAAACTCAAACTTGCTCAACAATGGCGTCTAAGCTACTTCTTTTCACCGTCTTTCTCTTTGATATCATCGCTTTTGGCTTAGCCATTGCAGCTGAGCAAAGGCGAAGCATTGTAAGCTCATCCCCTTTTTCTTCACTCTTTCTCTTCATCCTTGCGTATTTTAGTCAAAAGCTCTGCCTTTACTGCAAAATCTTGGTGTTCTCTTCTGGGTTAAACAGATTTCCAAACAAAGCAAACTCTTTTTTCTTTCACCTGGAAAAGAATTCAGATCTACTTTCATTGCTTTTCTTAAACCCTAATTCTTGCTGTTCCTTCCATAATTTCTTCTCAAAAACAAACCTAAATCCATTCTTTGTTACAGGCGAAGATAGTTGAAGACACAGATGCAAAAAGAAACTACTGTGTGTATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTTATGGCTAGCCAGATCCTCATAATGCTGGCTAGCCGCTGCTTCTGCTGTGGTAAGCCTCTGAGTCCCGGCGGTTCAAGGGCTTGTGCCCTCCTCCTTTTCATAGCCTGCTGGTAAGTGCACTGACTTGTTTCAACATCCAAATCTTGTATCGAAAAAGGCTGTTTTCACACTGGTATGATATTGGCTACTATTGCGAAATAATCTGTTTCAGGGTGTTTTTCTTAATCGCCGAGATATGCTTGCTGGCGGGTTCGGCAAGGAATGCATACCACACCAAGTACAGAACACTGCTTACTGATACTCCTCCCTCTTGCCAAATGTTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCACTTTCTTCACTTCCATTGTTTCTCAGTTTTACTACGTCTGCTACTCGAGGGCTCGAGAGAACTTCCAATCTTATAACAAAGACGCCAACATTGGCATGAGTACCTACAAATGAGATTCGTAGATGTCCTTTTCGATCATATCCCGCTACGAGATAGTTTTGTTTTTCACCTTTCTGNGGTTTTCAATCCAGTTTATAGAAGCCTATAGGTTGCCTTCTCTACTATTCTATGTTGTGAACAAAGTTCGTGGTTGATAGTCTTTGTGTCGGTATCGAAAAACATTGCTTGTTTGATTGTTTAGGCCATTGTGATGTCAGGCCGTAGGAAATGTTGCTGCTATGCAGAAGATGGACGTTCATGTTGCAAGGACATTGTGTTCTTGAAATAATGAACTTTTGAAACATCTGTTACTCAATCCCATTTCTCGAAATGGCCTACTAAACACCAATTCAGTATAATGAATTGTATCCCATGAATTCAAATGAAATCCAGATTCAATACTAAACATGGCTCTAATTATTTCACATTGTTGGAAACTCACATTATTGATTGTCCGGAGCTCACATTACGACAACTCCCTCAGAAGCCTAAACACTTTCCCC

mRNA sequence

TTTTTCTTTTTTTTTCTTTTTTTCTTTTATAGAATTTTAGAACACATATCTGAGATACCTTAATCCTCTGTTTGGTTTAAAGATAGATAGATAGATAGCAGAGTAGAAAAGGGTTGAAGAACGCTGAGATAAACAGATCTGCGAAGCTCTGAAACTCAAACTTGCTCAACAATGGCGTCTAAGCTACTTCTTTTCACCGTCTTTCTCTTTGATATCATCGCTTTTGGCTTAGCCATTGCAGCTGAGCAAAGGCGAAGCATTGCGAAGATAGTTGAAGACACAGATGCAAAAAGAAACTACTGTGTGTATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTTATGGCTAGCCAGATCCTCATAATGCTGGCTAGCCGCTGCTTCTGCTGTGGTAAGCCTCTGAGTCCCGGCGGTTCAAGGGCTTGTGCCCTCCTCCTTTTCATAGCCTGCTGGGTGTTTTTCTTAATCGCCGAGATATGCTTGCTGGCGGGTTCGGCAAGGAATGCATACCACACCAAGTACAGAACACTGCTTACTGATACTCCTCCCTCTTGCCAAATGTTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCACTTTCTTCACTTCCATTGTTTCTCAGTTTTACTACGTCTGCTACTCGAGGGCTCGAGAGAACTTCCAATCTTATAACAAAGACGCCAACATTGGCATGAGTACCTACAAATGAGATTCGTAGATGTCCTTTTCGATCATATCCCGCTACGAGATAGTTTTGTTTTTCACCTTTCTGNGGTTTTCAATCCAGTTTATAGAAGCCTATAGGTTGCCTTCTCTACTATTCTATGTTGTGAACAAAGTTCGTGGTTGATAGTCTTTGTGTCGGTATCGAAAAACATTGCTTGTTTGATTGTTTAGGCCATTGTGATGTCAGGCCGTAGGAAATGTTGCTGCTATGCAGAAGATGGACGTTCATGTTGCAAGGACATTGTGTTCTTGAAATAATGAACTTTTGAAACATCTGTTACTCAATCCCATTTCTCGAAATGGCCTACTAAACACCAATTCAGTATAATGAATTGTATCCCATGAATTCAAATGAAATCCAGATTCAATACTAAACATGGCTCTAATTATTTCACATTGTTGGAAACTCACATTATTGATTGTCCGGAGCTCACATTACGACAACTCCCTCAGAAGCCTAAACACTTTCCCC

Coding sequence (CDS)

ATGGCGTCTAAGCTACTTCTTTTCACCGTCTTTCTCTTTGATATCATCGCTTTTGGCTTAGCCATTGCAGCTGAGCAAAGGCGAAGCATTGCGAAGATAGTTGAAGACACAGATGCAAAAAGAAACTACTGTGTGTATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTTATGGCTAGCCAGATCCTCATAATGCTGGCTAGCCGCTGCTTCTGCTGTGGTAAGCCTCTGAGTCCCGGCGGTTCAAGGGCTTGTGCCCTCCTCCTTTTCATAGCCTGCTGGGTGTTTTTCTTAATCGCCGAGATATGCTTGCTGGCGGGTTCGGCAAGGAATGCATACCACACCAAGTACAGAACACTGCTTACTGATACTCCTCCCTCTTGCCAAATGTTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCACTTTCTTCACTTCCATTGTTTCTCAGTTTTACTACGTCTGCTACTCGAGGGCTCGAGAGAACTTCCAATCTTATAACAAAGACGCCAACATTGGCATGAGTACCTACAAATGA

Protein sequence

MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGMSTYK
Homology
[Close]
BLAST of CmaCh04G009090 vs. TrEMBL
Match: A0A0A0L5B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104340 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.9e-88
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIVED  AK NYCVYDSDISTGLGVGAFL
Sbjct: 1   MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ASQILIM+ASRCFCCGKPLSPGGSRA A++L I CWVFFLIAEICLLAGSARNAYHT
Sbjct: 61  FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLLITCWVFFLIAEICLLAGSARNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRTLLT+TPPSCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSY+KD  IGM
Sbjct: 121 KYRTLLTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYSKDTGIGM 180

Query: 181 STYK 185
           STYK
Sbjct: 181 STYK 184

[Close]
BLAST of CmaCh04G009090 vs. TrEMBL
Match: V4ULR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009639mg PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.0e-75
Identity = 137/184 (74.46%), Postives = 161/184 (87.50%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL+ TVF+FD+IAFGLA+AAEQRRS A I  D++   NYC+YDSDISTG+GVGAFL
Sbjct: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ASQ+LIMLASRCFCCGKPLSPGGSRA A++LFI CWVFF IAE+CLLAGS RNAYHT
Sbjct: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRT+  + PPSCQ +R+GVFAAGAAF FFT+IVS+FYY+CYS+ARE+FQ Y  +  +GM
Sbjct: 121 KYRTIWGENPPSCQTVRKGVFAAGAAFVFFTAIVSEFYYICYSKARESFQPYGGETGVGM 180

Query: 181 STYK 185
            TYK
Sbjct: 181 GTYK 184

[Close]
BLAST of CmaCh04G009090 vs. TrEMBL
Match: A0A067GFD0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030041mg PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.0e-75
Identity = 137/184 (74.46%), Postives = 161/184 (87.50%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL+ TVF+FD+IAFGLA+AAEQRRS A I  D++   NYC+YDSDISTG+GVGAFL
Sbjct: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ASQ+LIMLASRCFCCGKPLSPGGSRA A++LFI CWVFF IAE+CLLAGS RNAYHT
Sbjct: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRT+  + PPSCQ +R+GVFAAGAAF FFT+IVS+FYY+CYS+ARE+FQ Y  +  +GM
Sbjct: 121 KYRTIWGENPPSCQTVRKGVFAAGAAFVFFTAIVSEFYYICYSKARESFQPYGGETGVGM 180

Query: 181 STYK 185
            TYK
Sbjct: 181 GTYK 184

[Close]
BLAST of CmaCh04G009090 vs. TrEMBL
Match: A0A151SR26_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003543 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 8.3e-74
Identity = 137/185 (74.05%), Postives = 161/185 (87.03%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL TVF+FD+IAFGLA+AAEQRRS A+IV+D D   NYCVY+SDI+TG GVGAFL
Sbjct: 1   MASKLLLITVFVFDLIAFGLAVAAEQRRSTARIVQDRDQNYNYCVYNSDIATGYGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ SQ+LIM+ASRCFCCGKPLSPGGSRACA++LFI CWVFFLIAE+CLLAGS  NAYHT
Sbjct: 61  FLLVSQVLIMVASRCFCCGKPLSPGGSRACAVVLFIICWVFFLIAEVCLLAGSVENAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYN-KDANIG 180
           KYRTL  + PPSC+ +R+GVFAAGAAF FFT+IVS+FYY+ YS ARE+FQ Y+  +  +G
Sbjct: 121 KYRTLFMENPPSCETVRKGVFAAGAAFVFFTAIVSEFYYINYSSARESFQPYSGGETGVG 180

Query: 181 MSTYK 185
           M TYK
Sbjct: 181 MGTYK 185

[Close]
BLAST of CmaCh04G009090 vs. TrEMBL
Match: B9T1A3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0163950 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 7.0e-73
Identity = 133/184 (72.28%), Postives = 156/184 (84.78%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL TVF+FD+IAFGLA+AAEQRRS A I +D +   NYCVYDSDI+TG GVGAFL
Sbjct: 1   MASKLLLITVFIFDLIAFGLAVAAEQRRSTAVIKQDAEVNYNYCVYDSDIATGYGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FLM SQ++IM+AS+CFCCGK L+PGGSRA A++LFI CWVFF IAE+CLLAGS RNAYHT
Sbjct: 61  FLMLSQVIIMVASQCFCCGKALNPGGSRAWAVILFITCWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRT+ +D PP CQMLR+GVF AGAAF+ FT IVSQFYYVCYS+AR+ FQ Y ++  + M
Sbjct: 121 KYRTVFSDNPPDCQMLRKGVFGAGAAFSLFTLIVSQFYYVCYSKARDGFQPYGRETGVPM 180

Query: 181 STYK 185
            TYK
Sbjct: 181 GTYK 184

[Close]
BLAST of CmaCh04G009090 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218))

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-65
Identity = 120/167 (71.86%), Postives = 139/167 (83.23%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASK++   VF+F++IAFGLA+AAEQRRS A++V+DT+ + NYCVYDSD +TG GVGAFL
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           F +ASQILIML SRCFCCGKPL PGGSRA AL+LFI  W+FFLIAEICLLAGS  NAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARE 168
           KYRT+  D PP CQ LR+GVFAAGA+F FF +IVSQFYY  Y  A E
Sbjct: 121 KYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAE 167

[Close]
BLAST of CmaCh04G009090 vs. TAIR10
Match: AT3G15480.1 (AT3G15480.1 Protein of unknown function (DUF1218))

HSP 1 Score: 240.7 bits (613), Expect = 6.9e-64
Identity = 115/172 (66.86%), Postives = 143/172 (83.14%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKL++  VF+ D+IA GLAIAAEQRRS+ K+  D D + +YCVY +DI+T  G GAF+
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
            L  SQ+LIM ASRCFCCGK L+PGGSRACA++LF+ CWVFFLIAE+CLLA S RNAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 121 KYRTL-LTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQS 172
           +YR +   + PPSC+++R+GVFAAGAAFT FT+IVSQFYYVCYSRAR+ +Q+
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAYQN 172

[Close]
BLAST of CmaCh04G009090 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218))

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-61
Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKL++  VF+ D+IA GLAIAAEQRRS+ K+V D + +  +C Y SDI+T  G GAF+
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
            L  SQ++IM+ASRCFCCGK L PGGSRAC ++LF+ CWVFFLIAE+CLLAGS RNAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 121 KYRTLLT-DTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQS 172
            YR +   + PPSC+++R+GVFAAGA+F  FT+IVSQFYY+ YSRAR+ +Q+
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQT 172

[Close]
BLAST of CmaCh04G009090 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218))

HSP 1 Score: 213.8 bits (543), Expect = 9.1e-56
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MAS LLL  VF+FD+IAFGLA+AAEQRR+  +I  ++    +YCVYD DI+TGLGVG+FL
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
            L+ASQ+LIM+ASRC CCG+ L+P GSR+ A+ LFI  WVFF IA++CLLAGS RNAYHT
Sbjct: 61  VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYR    +T PSC+ LR+GVF AGAAF   T IVS+ YYV  SRA++ FQ  ++D  I M
Sbjct: 121 KYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKD-FQP-SRDPGIRM 179

Query: 181 ST 183
           S+
Sbjct: 181 SS 179

[Close]
BLAST of CmaCh04G009090 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218))

HSP 1 Score: 167.5 bits (423), Expect = 7.5e-42
Identity = 81/185 (43.78%), Postives = 126/185 (68.11%), Query Frame = 1 

Query: 2   ASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLF 61
           AS L+   V    ++AFG +IAAE+RRSI K ++D      +CVYDSD++TG GVGAFLF
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 62  LMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHTK 121
           L++S+ L+M  ++C C G+PL+PG  RA +++ FI+ W+ FL+AE C++AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 122 YRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRAREN---FQSYNKDANI 181
           Y   L+    SC  LR+G+F AGA F   T +++ +YY+ ++++  +    ++    +NI
Sbjct: 126 Y---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANRSSSNI 185

Query: 182 GMSTY 184
           GM+ Y
Sbjct: 186 GMAGY 187

[Close]
BLAST of CmaCh04G009090 vs. NCBI nr
Match: gi|659102701|ref|XP_008452269.1| (PREDICTED: uncharacterized protein LOC103493341 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 3.1e-90
Identity = 169/184 (91.85%), Postives = 178/184 (96.74%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIVEDT AKRNYCVYDSDISTGLGVGAFL
Sbjct: 1   MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTGAKRNYCVYDSDISTGLGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ASQILIM+ASRCFCCGKPLSPGGSRA A++LFI CWVFFLIAEICLLAGSARNAYHT
Sbjct: 61  FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLFITCWVFFLIAEICLLAGSARNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRTLLTDTPPSCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSY+KD  +GM
Sbjct: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYSKDTGVGM 180

Query: 181 STYK 185
           STYK
Sbjct: 181 STYK 184

[Close]
BLAST of CmaCh04G009090 vs. NCBI nr
Match: gi|449431826|ref|XP_004133701.1| (PREDICTED: uncharacterized protein LOC101203051 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 8.5e-88
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIVED  AK NYCVYDSDISTGLGVGAFL
Sbjct: 1   MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ASQILIM+ASRCFCCGKPLSPGGSRA A++L I CWVFFLIAEICLLAGSARNAYHT
Sbjct: 61  FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLLITCWVFFLIAEICLLAGSARNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRTLLT+TPPSCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSY+KD  IGM
Sbjct: 121 KYRTLLTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYSKDTGIGM 180

Query: 181 STYK 185
           STYK
Sbjct: 181 STYK 184

[Close]
BLAST of CmaCh04G009090 vs. NCBI nr
Match: gi|567919848|ref|XP_006451930.1| (hypothetical protein CICLE_v10009639mg [Citrus clementina])

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 137/184 (74.46%), Postives = 161/184 (87.50%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL+ TVF+FD+IAFGLA+AAEQRRS A I  D++   NYC+YDSDISTG+GVGAFL
Sbjct: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ASQ+LIMLASRCFCCGKPLSPGGSRA A++LFI CWVFF IAE+CLLAGS RNAYHT
Sbjct: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRT+  + PPSCQ +R+GVFAAGAAF FFT+IVS+FYY+CYS+ARE+FQ Y  +  +GM
Sbjct: 121 KYRTIWGENPPSCQTVRKGVFAAGAAFVFFTAIVSEFYYICYSKARESFQPYGGETGVGM 180

Query: 181 STYK 185
            TYK
Sbjct: 181 GTYK 184

[Close]
BLAST of CmaCh04G009090 vs. NCBI nr
Match: gi|1012346092|gb|KYP57284.1| (hypothetical protein KK1_003543 [Cajanus cajan])

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-73
Identity = 137/185 (74.05%), Postives = 161/185 (87.03%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL TVF+FD+IAFGLA+AAEQRRS A+IV+D D   NYCVY+SDI+TG GVGAFL
Sbjct: 1   MASKLLLITVFVFDLIAFGLAVAAEQRRSTARIVQDRDQNYNYCVYNSDIATGYGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           FL+ SQ+LIM+ASRCFCCGKPLSPGGSRACA++LFI CWVFFLIAE+CLLAGS  NAYHT
Sbjct: 61  FLLVSQVLIMVASRCFCCGKPLSPGGSRACAVVLFIICWVFFLIAEVCLLAGSVENAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYN-KDANIG 180
           KYRTL  + PPSC+ +R+GVFAAGAAF FFT+IVS+FYY+ YS ARE+FQ Y+  +  +G
Sbjct: 121 KYRTLFMENPPSCETVRKGVFAAGAAFVFFTAIVSEFYYINYSSARESFQPYSGGETGVG 180

Query: 181 MSTYK 185
           M TYK
Sbjct: 181 MGTYK 185

[Close]
BLAST of CmaCh04G009090 vs. NCBI nr
Match: gi|694407499|ref|XP_009378486.1| (PREDICTED: uncharacterized protein LOC103966971 [Pyrus x bretschneideri])

HSP 1 Score: 282.0 bits (720), Expect = 7.7e-73
Identity = 131/184 (71.20%), Postives = 159/184 (86.41%), Query Frame = 1 

Query: 1   MASKLLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL TVF+ ++IAFGLA+AAEQRRS AK+V+DT+   NYCVY+SDI+TG GVGAFL
Sbjct: 1   MASKLLLITVFILNVIAFGLAVAAEQRRSSAKVVQDTEVNYNYCVYESDIATGYGVGAFL 60

Query: 61  FLMASQILIMLASRCFCCGKPLSPGGSRACALLLFIACWVFFLIAEICLLAGSARNAYHT 120
           F +  Q++IM+ASRCFCCG+PL PGGSRA A++LFI CWVFFLIAE+CLLAGS RNAYHT
Sbjct: 61  FFLVGQVIIMVASRCFCCGEPLRPGGSRAWAVILFIICWVFFLIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFYYVCYSRARENFQSYNKDANIGM 180
           KYRT+ +++PP CQ LRRGVF AGAAF F T+IVS+FYYVCYSRARE+FQ Y  +A +G+
Sbjct: 121 KYRTIFSESPPDCQQLRRGVFGAGAAFIFLTTIVSEFYYVCYSRARESFQPYGGEAAVGL 180

Query: 181 STYK 185
            T+K
Sbjct: 181 GTFK 184

The following BLAST results are available for this feature:
BLAST of CmaCh04G009090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G009090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5B8_CUCSA5.9e-8890.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104340 PE=4 SV=1[more]
V4ULR8_9ROSI2.0e-7574.46Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009639mg PE=4 SV=1[more]
A0A067GFD0_CITSI2.0e-7574.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030041mg PE=4 SV=1[more]
A0A151SR26_CAJCA8.3e-7474.05Uncharacterized protein OS=Cajanus cajan GN=KK1_003543 PE=4 SV=1[more]
B9T1A3_RICCO7.0e-7372.28Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0163950 PE=4 SV=1[more]
BLAST of CmaCh04G009090 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27435.11.7e-6571.86 Protein of unknown function (DUF1218)[more]
AT3G15480.16.9e-6466.86 Protein of unknown function (DUF1218)[more]
AT1G52910.14.2e-6163.37 Protein of unknown function (DUF1218)[more]
AT1G61065.19.1e-5661.54 Protein of unknown function (DUF1218)[more]
AT1G13380.17.5e-4243.78 Protein of unknown function (DUF1218)[more]
BLAST of CmaCh04G009090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102701|ref|XP_008452269.1|3.1e-9091.85PREDICTED: uncharacterized protein LOC103493341 [Cucumis melo][more]
gi|449431826|ref|XP_004133701.1|8.5e-8890.22PREDICTED: uncharacterized protein LOC101203051 [Cucumis sativus][more]
gi|567919848|ref|XP_006451930.1|2.8e-7574.46hypothetical protein CICLE_v10009639mg [Citrus clementina][more]
gi|1012346092|gb|KYP57284.1|1.2e-7374.05hypothetical protein KK1_003543 [Cajanus cajan][more]
gi|694407499|ref|XP_009378486.1|7.7e-7371.20PREDICTED: uncharacterized protein LOC103966971 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G009090.1CmaCh04G009090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 58..152
score: 3.9
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 1..183
score: 3.6E
NoneNo IPR availablePANTHERPTHR31769:SF16SUBFAMILY NOT NAMEDcoord: 1..183
score: 3.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G009090Cucsa.074670Cucumber (Gy14) v1cgycmaB0122
CmaCh04G009090Csa3G104340Cucumber (Chinese Long) v2cmacuB702
CmaCh04G009090MELO3C016525Melon (DHL92) v3.5.1cmameB689
CmaCh04G009090CSPI03G06080Wild cucumber (PI 183967)cmacpiB710
CmaCh04G009090CmoCh04G009780Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G009090CmoCh16G008490Cucurbita moschata (Rifu)cmacmoB700
CmaCh04G009090Lsi04G013170Bottle gourd (USVL1VR-Ls)cmalsiB685
CmaCh04G009090Lsi05G007090Bottle gourd (USVL1VR-Ls)cmalsiB691
CmaCh04G009090Cp4.1LG01g08470Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G009090Cp4.1LG14g00250Cucurbita pepo (Zucchini)cmacpeB714
CmaCh04G009090MELO3C016525.2Melon (DHL92) v3.6.1cmamedB778
CmaCh04G009090CsaV3_3G006180Cucumber (Chinese Long) v3cmacucB0837
CmaCh04G009090Bhi11G000618Wax gourdcmawgoB0817
CmaCh04G009090CsGy3G006180Cucumber (Gy14) v2cgybcmaB416
CmaCh04G009090Carg21083Silver-seed gourdcarcmaB0662
CmaCh04G009090Carg00029Silver-seed gourdcarcmaB0948
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G009090CmaCh09G008810Cucurbita maxima (Rimu)cmacmaB064
CmaCh04G009090CmaCh16G007870Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G009090Watermelon (97103) v2cmawmbB718
CmaCh04G009090Wax gourdcmawgoB0826
CmaCh04G009090Watermelon (Charleston Gray)cmawcgB614
CmaCh04G009090Watermelon (97103) v1cmawmB659
CmaCh04G009090Watermelon (97103) v1cmawmB680