CmaCh04G007720 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCCACAGAATCGAATGGCCGCTGGTGCGGCTGGTAAACGGGTGGGGCAATTGGTAGCCAATTCAGCTTTTCGAAGTTTGGGAGCTTCGAAGGTGTCTTCGTTCGAAAGCGCAATCTCCGACCATTCTGCAAATAATTTATCGGCATCCATCTCTTTGATTTCTCGGTACAGACACTGTGAATTTAGGCAGATCTCTCACCTTTCAAAATCCAACGGAAAGCGTTTATTTCTAGTCGACACGTTAGCCCTAGTAATTTTGCTCTCTTTGTTCTTCCCCACCCCCAGCTCTTGTTACATCTTTGTTTTGGTTCTTATAAATTGCTTGCGTTGTAAAAGATTTGGAATCACTTGTATTTTTCTTCATATGATTCCCCTGAGGATATATGATATCTGAATGAAGATGGAGTGAGAATTTGAGAATCTCTGTGTTGTTCTCACAAGGGTTGTTGGAAAGTGATATGATGCATTTCTTCCAGGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAAGCAATAACAGATGCCATTACCGAAGTGTTAAATGATAGCTTGGAAAATGTATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAGTGAGTTTCTAAGTACTCAATGTTTACATGTCTTGAATTCAGCTAATGTTATCATTGTACAATGATGGCAACAAGAGGAGGTTCTTGATGAAATGAGCATCTATAACATTTGTCATTCTACCATTTTTTGTTTTGTTTATAACCTACTAACCTTTCATTGGATGTCATGTTATGTTTGTAGATTGAAATGATCCAGGAGGCCAATTTGTCGAAATTCAAATCTGAAGTTCAAAGCTCACAGGTATTTACTAGTATTATTTATTTTATTTCTGTATTTCTTATACACAAATAGGTTTCATGATTCGCTGTTAAATATAATATAAGAGATATTTGAATTTCATATTCTCGCTGTATTTTGATTGATTATAGTCTTTTAGCATTGTTCTTTGTTATTGGCTTGCTGTTGTACTATCCTTATTTAGTTCCCTAGTCTGCTTAGATGATAGTGTCTATTTTTAATACTGTTTAATTTGTTAGGATTAGCAACAAAATAAGGGGAAAACCTTGAATTGAAAATGTCTTATTGATATATTGTACTAGTATTTAGTTTCCATTGTTGTCTTGCATATCTTATGATATTGTTCCAGTTCTCGAATAAAATAGAAAAATTCTAGAGTGGCGTGATGATCTGCTCCTAATTTCCTGTTCTTGCAATATGTTACATAATTAAAGCTTGATCAGGGCTTCAACTACCATGAGTTGGTTGGACAAACCTTGTACTTGTATGTTTTTTAGGTTATGGGATCAATTCGTAGTGTCATTCTATTCGAGATGCCAAATAGCTTACAAGTTTCTGGAATTTGACCAAATGTGGTATTTTGGATAGCATGTAGATGGGTGGGGTGGGAACTTTATACAGGTTGAATAACTGAACTTGAAAGTATAATACTTATTGCACTTGGATTTTCCAAACTATTTTGGTGTTTGCACTGCTAGTTAATGTAATATTTTTGTATACCATGGACATGGAGCTCCCATATGTTACTGGAAGGATTCTAAGAGATCTGACTTTAGAGTCGATGTACAACTTCGTTGTTGAGTATAATCGGGTCTAGGTTAAGGCTAAGATCTGCCCACTCTATAGCCTCTGCATCCTTCAAGCTCCTCCCAAGTCTAAGATCACAAAGTCTGTTGGTGGTGCTCCAAACATCTTTTAACGGTGGCATCTTTATAATGAAAAAGCTTGAAGAGGTGGGGGTGATGCGAAGCCAAGGATCGGGCTTCATTACCAACTTGGTGACACATGTTGATAGTCTTCTTTCTATTGAATTCTAGAAACGCCAGCGAGAGGAATCCCCATATAAGAATTCAATCATTCACCCATTTTACAACCATACTTCTTAGCTTCGTCCTCAATAATTGGGGGATCAACATTAATACCAATAATCTCTGATTTATGAAGATTAATGTGGTGTCTGGAAGCCTGTTTGAAACCCAACTCCCTCGAGGAGGTATTGAAATGATCTCTTATCTTCGGACTCAGAAAATGGAATGGTGTCATCAACAAATGAGATATGTTTGATTCTTAAATTACCTTGGGCAACCCAAAGGCCTTTGATATGACCCTCGCATTTGAGTTCGAATAGCAAACTGCTAAAGTTGCCCATAATCATAATGAAAAGGAAGGGAGATAATGGACCCCCTTGTCTTAGGGCCCCAAGTTGCTAGAATTTTACCATGAGGACGGCCATTGATGAGAATTGAGAAATCAGTAGAGGAGATGCATCCTTCAATCCAAATTCTCCACTTAAGACCGAAGCCTTTGGAAGCAAGGATATTATCAAGAAAATCCCAATCCGCCTTATCAAAACCCTCTTCTTTCTTTGCCATTCGTCAATAAGTTCATCGGCCTGGAGATGCATTAAGGATTTGTCTTTGTCATCCCTCAGCAAATGTTGTTTGATACTCTAATGGTGAGAGGAAAGGCCTTTTTGAGACTTTCTGAAAGGACCTGGGTGATGATTTTATAGAGGCAAGTGGTGAGGCCAATAGGGTGAAAGCCAGCCACAGTTCTAACATAGAGTTTCTTTGGAATAAAACAAATTTAAGTCTCAAAATTTTATTTGTTAAGGAAATCTTATAGTTCACAAAGTTGGTTTGTTAGTTTATGTTTTCTGACCATTGGATTAACACATGCAATGTAGGGGAACCATTTTTCGTTATTGGGACACGAGACTGAAAAACTCCGAAATGATATTGACAAGATGCGCAATGAGTTGAGGTTTGTTTTAGCGTACCTCAGTTTATATGAAATGTATACTGAGTTCATATTTTAGACATTAGCTCTTGAATTGGTCTCATTTGTGAAGGACCTGTGATCATGGTGCAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAGAGAGGGTAAGTGAACTTTTTGTGTAAGAAGAAGCAGGAGAGTGTGTTGGTTGGGGAATCAATTTTGGTTACACGTTTTTGTTGTTCACAAGTGCAGGAGGATACGGGATGAGCTAGCTAATCAGAATGCTGAAACAAACAACCTAACTAATAAACTTGATCGGGTAAGACCAACTACGTGAAAGATTGAGAGGTTGGAATGCTTTGTGTTTATTAAGAAACTCTAGTGTGCGAGTAATTTGTAATCTTGTTTGCTAAAAAAATTGCAGGAAATTCATGCTCTGAGAGCACAAGTGGAAGCTGCGAAATACGATGTAATAAAATACTGCATCGGTACCCTTGTTTCCATATCTGCTGTGGGTCTGGCTGTGATCCGCATCTTGATGTGAACAACAAGGTGATGCTCATGAAGATCTTACAGGGATTTATCAGGACCATTTATTTATATTCTTAGAATTCCTTCAACAACATGACATTGTTTCTATTTTTTCTTTCTTTCTTTAAGCTTCTTCAAGCTCCTTCGTACATGTCAATTACCACTCGGTCGATGATAAACATTCTTCCGATGTTCAAGATTTTCTTGTGCATATTTTTCACACTCCCAATCCCAAGCAGATGGATAATGAGACCAACATTTAAT ATGTTGCCACAGAATCGAATGGCCGCTGGTGCGGCTGGTAAACGGGTGGGGCAATTGGTAGCCAATTCAGCTTTTCGAAGTTTGGGAGCTTCGAAGGTGTCTTCGTTCGAAAGCGCAATCTCCGACCATTCTGCAAATAATTTATCGGCATCCATCTCTTTGATTTCTCGGTACAGACACTGTGAATTTAGGCAGATCTCTCACCTTTCAAAATCCAACGGAAAGCGTTTATTTCTAGTCGACACGTTAGCCCTAGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAAGCAATAACAGATGCCATTACCGAAGTGTTAAATGATAGCTTGGAAAATGTATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGAGGCCAATTTGTCGAAATTCAAATCTGAAGTTCAAAGCTCACAGGGGAACCATTTTTCGTTATTGGGACACGAGACTGAAAAACTCCGAAATGATATTGACAAGATGCGCAATGAGTTGAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAGAGAGGGAGGATACGGGATGAGCTAGCTAATCAGAATGCTGAAACAAACAACCTAACTAATAAACTTGATCGGGAAATTCATGCTCTGAGAGCACAAGTGGAAGCTGCGAAATACGATGTAATAAAATACTGCATCGGTACCCTTGTTTCCATATCTGCTGTGGGTCTGGCTGTGATCCGCATCTTGATGTGAACAACAAGGTGATGCTCATGAAGATCTTACAGGGATTTATCAGGACCATTTATTTATATTCTTAGAATTCCTTCAACAACATGACATTGTTTCTATTTTTTCTTTCTTTCTTTAAGCTTCTTCAAGCTCCTTCGTACATGTCAATTACCACTCGGTCGATGATAAACATTCTTCCGATGTTCAAGATTTTCTTGTGCATATTTTTCACACTCCCAATCCCAAGCAGATGGATAATGAGACCAACATTTAAT ATGTTGCCACAGAATCGAATGGCCGCTGGTGCGGCTGGTAAACGGGTGGGGCAATTGGTAGCCAATTCAGCTTTTCGAAGTTTGGGAGCTTCGAAGGTGTCTTCGTTCGAAAGCGCAATCTCCGACCATTCTGCAAATAATTTATCGGCATCCATCTCTTTGATTTCTCGGTACAGACACTGTGAATTTAGGCAGATCTCTCACCTTTCAAAATCCAACGGAAAGCGTTTATTTCTAGTCGACACGTTAGCCCTAGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAAGCAATAACAGATGCCATTACCGAAGTGTTAAATGATAGCTTGGAAAATGTATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGAGGCCAATTTGTCGAAATTCAAATCTGAAGTTCAAAGCTCACAGGGGAACCATTTTTCGTTATTGGGACACGAGACTGAAAAACTCCGAAATGATATTGACAAGATGCGCAATGAGTTGAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAGAGAGGGAGGATACGGGATGAGCTAGCTAATCAGAATGCTGAAACAAACAACCTAACTAATAAACTTGATCGGGAAATTCATGCTCTGAGAGCACAAGTGGAAGCTGCGAAATACGATGTAATAAAATACTGCATCGGTACCCTTGTTTCCATATCTGCTGTGGGTCTGGCTGTGATCCGCATCTTGATGTGA MLPQNRMAAGAAGKRVGQLVANSAFRSLGASKVSSFESAISDHSANNLSASISLISRYRHCEFRQISHLSKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITDAITEVLNDSLENVSHSFVSKGEMQKIEMIQEANLSKFKSEVQSSQGNHFSLLGHETEKLRNDIDKMRNELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETNNLTNKLDREIHALRAQVEAAKYDVIKYCIGTLVSISAVGLAVIRILM
BLAST of CmaCh04G007720 vs. Swiss-Prot
Match: FMP32_YEAST (Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17 Identity = 47/166 (28.31%), Postives = 99/166 (59.64%), Query Frame = 1
BLAST of CmaCh04G007720 vs. Swiss-Prot
Match: CC90B_HUMAN (Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens GN=CCDC90B PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14 Identity = 53/196 (27.04%), Postives = 101/196 (51.53%), Query Frame = 1
BLAST of CmaCh04G007720 vs. Swiss-Prot
Match: CC90B_RAT (Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus GN=Ccdc90b PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.6e-14 Identity = 55/196 (28.06%), Postives = 98/196 (50.00%), Query Frame = 1
BLAST of CmaCh04G007720 vs. Swiss-Prot
Match: CC90B_MOUSE (Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus GN=Ccdc90b PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.6e-14 Identity = 52/196 (26.53%), Postives = 101/196 (51.53%), Query Frame = 1
BLAST of CmaCh04G007720 vs. Swiss-Prot
Match: CC90B_XENTR (Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis GN=ccdc90b PE=2 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 4.3e-13 Identity = 53/197 (26.90%), Postives = 100/197 (50.76%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TrEMBL
Match: A0A0A0KZG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043920 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 2.7e-115 Identity = 231/255 (90.59%), Postives = 241/255 (94.51%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TrEMBL
Match: M5VQZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010752mg PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 3.9e-90 Identity = 194/249 (77.91%), Postives = 211/249 (84.74%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TrEMBL
Match: A0A061DYL3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006792 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 6.5e-85 Identity = 177/205 (86.34%), Postives = 188/205 (91.71%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TrEMBL
Match: A0A0S3R3Z4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G327300 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 4.7e-83 Identity = 188/248 (75.81%), Postives = 203/248 (81.85%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TrEMBL
Match: A0A0L9TNW6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g180100 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 4.7e-83 Identity = 188/248 (75.81%), Postives = 203/248 (81.85%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TAIR10
Match: AT2G16460.1 (AT2G16460.1 Protein of unknown function (DUF1640)) HSP 1 Score: 305.8 bits (782), Expect = 2.4e-83 Identity = 168/219 (76.71%), Postives = 191/219 (87.21%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TAIR10
Match: AT3G51090.1 (AT3G51090.1 Protein of unknown function (DUF1640)) HSP 1 Score: 285.8 bits (730), Expect = 2.6e-77 Identity = 167/251 (66.53%), Postives = 196/251 (78.09%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TAIR10
Match: AT2G35090.1 (AT2G35090.1 Protein of unknown function (DUF1640)) HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10 Identity = 53/192 (27.60%), Postives = 91/192 (47.40%), Query Frame = 1
BLAST of CmaCh04G007720 vs. TAIR10
Match: AT2G35070.1 (AT2G35070.1 unknown protein) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08 Identity = 50/182 (27.47%), Postives = 83/182 (45.60%), Query Frame = 1
BLAST of CmaCh04G007720 vs. NCBI nr
Match: gi|778690649|ref|XP_011653145.1| (PREDICTED: protein FMP32, mitochondrial [Cucumis sativus]) HSP 1 Score: 422.9 bits (1086), Expect = 3.9e-115 Identity = 231/255 (90.59%), Postives = 241/255 (94.51%), Query Frame = 1
BLAST of CmaCh04G007720 vs. NCBI nr
Match: gi|659107512|ref|XP_008453713.1| (PREDICTED: protein FMP32, mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 421.4 bits (1082), Expect = 1.1e-114 Identity = 230/255 (90.20%), Postives = 240/255 (94.12%), Query Frame = 1
BLAST of CmaCh04G007720 vs. NCBI nr
Match: gi|659107514|ref|XP_008453714.1| (PREDICTED: protein FMP32, mitochondrial-like isoform X2 [Cucumis melo]) HSP 1 Score: 411.0 bits (1055), Expect = 1.5e-111 Identity = 225/249 (90.36%), Postives = 234/249 (93.98%), Query Frame = 1
BLAST of CmaCh04G007720 vs. NCBI nr
Match: gi|595806823|ref|XP_007202505.1| (hypothetical protein PRUPE_ppa010752mg [Prunus persica]) HSP 1 Score: 339.3 bits (869), Expect = 5.6e-90 Identity = 194/249 (77.91%), Postives = 211/249 (84.74%), Query Frame = 1
BLAST of CmaCh04G007720 vs. NCBI nr
Match: gi|645273238|ref|XP_008241782.1| (PREDICTED: protein FMP32, mitochondrial [Prunus mume]) HSP 1 Score: 337.4 bits (864), Expect = 2.1e-89 Identity = 193/249 (77.51%), Postives = 210/249 (84.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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