CmaCh03G001460 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACCGGACTCGAGCAGCTCCGAGAAATTCGTTACTTCAAACATAGAGAAAAGAGGCAATTATGTCTTTTTTTTGTATAACCTGAAATTCAGGTAATTGTATAAAATGTCCGTTAGTGTAACTTAAAATTTGCATTAAGGCTTCACTGAAATCTTCGTTGCTCAAGGATTTCCATTCAAGTTATTTCTTTACGGACCATTTTGAATTTTGATATTAACTTTATAATGTAATTGACACATTATGATTGTTCCCAACCTTTACATATATGATCAAATGATTGTAGTGGAATGTCGAGGCCTCCACCACAAGAAATGGTACATTTAATAGCATTTCCTTATAGCCTTTTTCACATGACGCTATAAAAGTCCTTACAAAAAACACGCCGGCCCAACAAAGTTTCATTTTAGGGCTTTTTTTTTATTTTTATTTTTATTTGTCATTCATTTTCTATTTGGCTACCACTGTAATCTCCAGATTTGTTGCTCTTTCGGCCAAGAGCTTTGCTATGTGTTGTCCACTTCAAAGGGCAAGGTGAGATGAACCAGTATTTTTCTTTTCAATTTTTCATGCTCGGGCTACTTCTTTTTTTTTTTTAGTTTTTTATGGCTTTCTTTCTCTATCTTTTATATTTAATAATGGTGGCTCTAAATCATTTCGAACCCCATTTTCTTTGATTTGGCTTTCTGGGTGCTGGAATCTCCGTCGAAAATTCGTGTTTTGAGCTTAATTTGCGGAAGGGTTTTGATTGGTAAGGCTTCTAGTGGGTGGAGTCTAAGTGGGTTGCTTCGATTTTGTGCCATGGTTGTGATTGAAGAGGGAAAATTGTAATGGAGGAGAGTGTTGGTTGAAAAGAGTGAAGGGATTGGTCACATTGTGCCTGAAAATGAGACGTTTGGCCATTTGATTGAAGAACATAGACGTGAGAGTAGGTCGTGCTCTGATTTTCTTACATCAGAGACCACAGGGCTTGAGGAGCACAGTCATAGCGGCTCTGAGGACTCATCTTCCCCTTCTTCATTCAGTTGGTCCACTCGAAAAGCTGATGAACCCGATTGTATTAGACTTAATGTTGCTGATAAAGCAGAAAAAAACTATGTTGTTCATAGGAAGCCGGAGAAGAAAGTATCTTCATTTTCCTTTACGGCTTTCTCCATATAAATTGTATTAATCTTTTAATGGTGTGTGGGGCTATAGAGATTGAGATGATGAAGGAAAGATTTTCTAAACTGCTACTTGGAGAAGATATGTTAGGCTGCGGAAATGGGGTTCGTACGACATTGGCTATATCTAATGCCATTACAAATCTTTGTGATATGCTTTGTCTCTTTTACACTCATTGTCTGATACTCTATCTAGGATTGGCATTGGTTACAGTGATTGGCTATATCTAATGCCATTACAAATCTTTGTGATATGCTTTGTCTCTTTTACACTCATTGTCTGATACTCTATCTAGGATTGGCATTGGTTACAGTGATTGGCTATATCTAATGCCATTACAAATCTTTGTGATATGCTTTGTCTCTTTTACACTCATTGTCTGATACTCTATCTAGGATTGGCATTGGTTACAGTGATTGGCTATATCTAATGCCATTACAAATCTTTGTGATATGCTTTGTCTCTTTTACACTCATTGTCTGATACTCTATCTAGGATTGGCATTGGTTATAGTGATTGGCTATATCTAATGCCATTACAAATCTTTGTGATATGCTTTGTCTCTTTTACACTCATTGTCTGATATTCTATCTAGGATTGGCATCTGATATTCTATCTAGGATTGGCATTGGTTACAGTGTCTAATGATGATTCCCTTCCCCATTGTTTTGTTATAGCCACTCTGTTTAAGCAACTGTGGCGATTAGAACCTATTCCCCAACAGAAGAATCATTGACGCCTACTTGGCAGGCAAGCTTGAGGTACTGGATAAGGATAACTTCAAACAGGTTTCTTATGGCCCTGCAATGTTGTGAATTGATGAACTTCGTTTTGATTTAGTGTTGAACAAGTTTGTGGGCTTCTGTTTAATCGTACATGGTTTTTTTGGTTGTGGTCGTTCACATGCTTAAGTCTCATAAATGTAAGCTCACATGGAAAGGATTCTCTCTGAAGCTTTTATGCAATGTTCGACTTCGACTTCGAACTTTATTTGGACTCAAATCTTCCTATATTGTGATAACTTTAGTTGACGTAGGTGGCCAAGAGCTTGGAGGAATGCATTATGTCACATTATTCTTGCTTATCGATGTAACCTATAATCTGTTTAGCAACGTTAAGAGTAAGTGCACTATCTCTCATTCGGTTCGGTTCAGGTTCCTTCATTCATTTACTTACCGAGTTACATCAACAAGAATACATTCTAGTAACTTCGAACTTTATTGAATCAACTGTCTTGGAGGATATATATCACTCTGACCAAGAACATACTGAAAGAATATCATGAGCTGATAGGGGATCCCCGAAAATGCCCGTTCCTTTGTCGTTGGGGCCCAAAATCTTCCTTGCTGAGACTTGACTTGTAGTCTGGTAAGATTGTGCAACCCTTATTATGGTCATCCCTCATTGGTTGTCCGCGGATTCCATTATCAAACCAAGATCAGGCAATTTACCCTCCTGAAAAGACGGAGGCAATGCCCCTTCTCCGACCCTGACTGCCCAATCGGATAACAGCTAATGCGTTCTACTTATTGAACAGGGTTGATTGGTTTTTCAATGCCTAATTTCTCTGATTTAGCAAATTTGTCATAACACTCATAATGATCAACTTTATGAAGATCCCATGGTATTCCGGAAGCTCGCAGGTTCCTCAGTTTAAGCTAGCGATGGGGAAAGGCTAGGTAGCTGGCTTTCTTAGGATTGCTCGCTGGCTCTCCCTTCACTGTACTAATTCACTTACTCGAAAAAAAACAAGCAAATGGAAACAGCAACTAACTATAGCAAAGTAGGTTCAAGTCACACTGGTATCTCTTGACTACGGTACAGGATTCTATGGTAATGGAACCAATAAATATATGGATTTATGAGAAACTCCATTAAGAGGGGAAGGAAGAAAAGACATGCAATGAATTGAATAAAGAAGGTCGGCCCTCACCTTAATTACCTGAGCTACTTCATTCAATCCGAAAAGTGTTTGTGATATTGTGGCTAAGTTGGATGGTTGAACTTGTTTTCATTAGTTGTCTTGTTGTGGTATTATCTCTATTTTTCGTAAAGTGATCGTCGTTCAAACATTATTTCTAGATGAAGCTTGCGGGATGAATTTATTATGGGTTGGAAAAACCTTTTTATTCCTTTTCGTTCCGTAGTATTTTAGTATTTTTTTTCCAAAAAATACACCGTAAAGATTCTTTTTGTTCTCCTGGTTTGTCTTCATATCATAGGTGACAGGCTTCACATCATAG ATGAAACCGGACTCGAGCAGCTCCGAGAAATTCGTTACTTCAAACATAGAGAAAAGAGGCAATTATGTCTTTTTTTTGTATAACCTGAAATTCAGTGGAATGTCGAGGCCTCCACCACAAGAAATGATTTGTTGCTCTTTCGGCCAAGAGCTTTGCTATGTGTTGTCCACTTCAAAGGGCAAGAGTGAAGGGATTGGTCACATTGTGCCTGAAAATGAGACGTTTGGCCATTTGATTGAAGAACATAGACGTGAGAGTAGGTCGTGCTCTGATTTTCTTACATCAGAGACCACAGGGCTTGAGGAGCACAGTCATAGCGGCTCTGAGGACTCATCTTCCCCTTCTTCATTCAGTTGGTCCACTCGAAAAGCTGATGAACCCGATTGTATTAGACTTAATGTTGCTGATAAAGCAGAAAAAAACTATGTTGTTCATAGGAAGCCGGAGAAGAAAGTGACAGGCTTCACATCATAG ATGAAACCGGACTCGAGCAGCTCCGAGAAATTCGTTACTTCAAACATAGAGAAAAGAGGCAATTATGTCTTTTTTTTGTATAACCTGAAATTCAGTGGAATGTCGAGGCCTCCACCACAAGAAATGATTTGTTGCTCTTTCGGCCAAGAGCTTTGCTATGTGTTGTCCACTTCAAAGGGCAAGAGTGAAGGGATTGGTCACATTGTGCCTGAAAATGAGACGTTTGGCCATTTGATTGAAGAACATAGACGTGAGAGTAGGTCGTGCTCTGATTTTCTTACATCAGAGACCACAGGGCTTGAGGAGCACAGTCATAGCGGCTCTGAGGACTCATCTTCCCCTTCTTCATTCAGTTGGTCCACTCGAAAAGCTGATGAACCCGATTGTATTAGACTTAATGTTGCTGATAAAGCAGAAAAAAACTATGTTGTTCATAGGAAGCCGGAGAAGAAAGTGACAGGCTTCACATCATAG MKPDSSSSEKFVTSNIEKRGNYVFFLYNLKFSGMSRPPPQEMICCSFGQELCYVLSTSKGKSEGIGHIVPENETFGHLIEEHRRESRSCSDFLTSETTGLEEHSHSGSEDSSSPSSFSWSTRKADEPDCIRLNVADKAEKNYVVHRKPEKKVTGFTS
BLAST of CmaCh03G001460 vs. TrEMBL
Match: A0A0A0KXQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303120 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.9e-28 Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 1
BLAST of CmaCh03G001460 vs. TrEMBL
Match: A0A067JKL9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25095 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-12 Identity = 54/97 (55.67%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of CmaCh03G001460 vs. TrEMBL
Match: M5VXJ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002319mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10 Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 1
BLAST of CmaCh03G001460 vs. TrEMBL
Match: B9T764_RICCO (Rop guanine nucleotide exchange factor, putative OS=Ricinus communis GN=RCOM_0358810 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.5e-10 Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 1
BLAST of CmaCh03G001460 vs. TrEMBL
Match: B9IFZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s10130g PE=4 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 7.2e-10 Identity = 46/96 (47.92%), Postives = 57/96 (59.38%), Query Frame = 1
BLAST of CmaCh03G001460 vs. NCBI nr
Match: gi|659069194|ref|XP_008448594.1| (PREDICTED: rop guanine nucleotide exchange factor 7-like [Cucumis melo]) HSP 1 Score: 132.5 bits (332), Expect = 6.4e-28 Identity = 70/93 (75.27%), Postives = 76/93 (81.72%), Query Frame = 1
BLAST of CmaCh03G001460 vs. NCBI nr
Match: gi|449460361|ref|XP_004147914.1| (PREDICTED: rop guanine nucleotide exchange factor 7 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 8.4e-28 Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 1
BLAST of CmaCh03G001460 vs. NCBI nr
Match: gi|643710324|gb|KDP24531.1| (hypothetical protein JCGZ_25095 [Jatropha curcas]) HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12 Identity = 54/97 (55.67%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of CmaCh03G001460 vs. NCBI nr
Match: gi|802751241|ref|XP_012087976.1| (PREDICTED: rop guanine nucleotide exchange factor 7-like [Jatropha curcas]) HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12 Identity = 54/97 (55.67%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of CmaCh03G001460 vs. NCBI nr
Match: gi|470133687|ref|XP_004302692.1| (PREDICTED: rop guanine nucleotide exchange factor 7 [Fragaria vesca subsp. vesca]) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-11 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |