Cucsa.375380.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.375380.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	5'-AMP-activated protein kinase-related
Location	scaffold03746 : 414652 .. 417147 (-)
Sequence length	570

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAATGCATTACTGGCTGACTCAGAAAGAGATAGGCTTGTCAAAAAGCTCAGTCATGCCAACCAGCAGAACAGACTTCTCAAACGACAGGTGCAAAGACATGGTTGTGTTTTTTTTTAAGTTACAAGTCTGTTAACCAAGGATTTTTTACTTTTCATTTTGCAGATGCACACTCATTTTCTTTTATTATTTTTTTTGGTGATGTTTTATGTTTACTATATCTTCTATTGTACAGGTTTTATATGGTACAGATTAACTTAGAAACCAGAATCAAAATTCTACGGATAGATCTTTTTGTCTCCAACTTATACTCAAATCTCGAATATTGATCATAAAAATGTGCATATATGAATATTTAATTAATTTTATGTAATATGCGATAGGTTGAGTTACGAGCTTAGTTCCTCATCTATGGACCAATCTTTCTTGAAATCCCTTTTTCTCTGGTATTAATCTGTTGGTCTTTTTTCCTAACGTTAATTTGTCTGACTGTTTTATAGTGTATGTCAACTAAATCACTTTTGTTTGATAACCATTTTAATTTACAACAATTATTTTGTTGGGATAGTCTTTGTCTACATGGCATTATCCACTACCGATTCACATAATCATTTTTGTTTACAACTATTAGCAAAAGAATCCACCTGAAATAGATCATTAGTCAAAGAAAAAATATTTGCTTCTTGTTTTCTTTTGTTTGATTAATGTCTGCAATAAATTAAGCTTTTCCATCAAGTTCATATTCTGTGGCGTAATGACAGCTCACTCTGAGGCATCTATATGTTCACAACTCGTGCAACTTGTGCAGTCGTGTTTCTTTGACCATATCATTTGTAAAATGTTTGAGGTAGACAGAGAGAACAACAAAATAAGATCCTGAAGAGAGCTACAATGTCAAGCTTTCTTTATTGTGTCGAGACAAATTTCCCCTTAGATATATTTAAATGCATTAAGCCACAATGATTTGACATTTCGACTATTGATTACTATAATTTTTATATGTTGGCCCCTGGGAGTTGGAGATGGTTAATGCTTTCTTATTTCCTTGATTCTTTTAAGACAAAATTATTGAGGGATATGAAGTTGATTTGTATGGCCAAAACATCTGGTATCAATGGGGGAACAGAAAGTCTCATCATATTTTATCCTCTCAGCTACATGTAAAGGATGAAGATTTGGTTAACTGTAAGACCGAACTTGCTGCCTTGGACCATGACATTCAGGTTAGGCTTTAGTTTTTTTTAGACAATAAACACTATAGTTTTTTTTTACATTTATTCAGACAATAAACACTATAGTTTTTTTTTATAAGAGACAATAAACACTATAGTTGAAATTTTCTTTCATGTATGGTGTAAAGGGTTTGATCAAACTAGCAGAAGAAATAGCACAATCTGGTATACCAGAACGTACGAGAAAGATTAATGGGAAATACATTCAATCTCACCTTCTTACAAAATTAGAAGGTATAATGACGATTCTAATCTTTGCTATCAACAATAGTGGGTTTCTTCCTCTGCACCTGAGTTTTGTCATCTTCTTTCTGCATTTGTGTGTGAGATTATGTGTGCTGCCCTCCATGAAAGTTCTCCGTTATTACTCAAAAATGTATCGTTGACTTGTTACTTGTTGGACTCTTCTTTTTCTTTGAAGCTGTACACAAAAAGATAATGGATCAAATAAAAGATGTAGATTTGGTGCAATCAAAAGAAGTTCCACTATTCTGGTATGGAATGGCTGAGGTAATAAAAGCAAATTCTATTTTTGTTGAAGTATTGATATAATTAAATTTGTTGAAGTATTGATATAATTAAATTCGCTGTAACCGATCAACTTAAGCTTTTAAGTTAAGCTTAAGTTGATTGATAATTTTAACAATATTTTTTGCAATTTTCTCTATATCGGAAAGGAGACCAGCTTTCTAAATTCTAACATTTGACTTTTACAATTTTCCTAAATGTGAAATGTTCGAATCCCTACCGCCGGATTATTTTGAGAACAAAAACAACTAGGTCTGATTTTATCTTAACTCTTAAGTTTCTTTCTTTCATCATCGCTATCATTCTTATAATTTTATCTTCATTTTTTAATAGAATGTGCAAGTTATGGGAACTTTTGATGGCTGGAGTGTAGGGGAGGATTTATCACCTGAATACACTGGGGCTTACTCTAAGTTCTCGACAACTTTAAGGCTTAGACCTGGGAGGTATAATTCCTCTCCCTTGCCTTCCTCTCCTCTTGATTTTCTTGATTTACTGATCAAATGACTACCTTCATGACCTTATTATTCTAATCATGGGAATCATTGGTTGATGATTGATCTATTATGTGTATTAATTTGTGTTACATAGAACATTATTTCTTTTGCTGTTGTTTCTGTAATATATATGAAGGTACGAAATCAAGTTCCTAGTGGATGGAGAATGGCAGCTATCAACAGAATTTCCCACTGTTGGCGAAGGTTTGATGGAAAACAATCTGTTAGTTGTGGAATAG

mRNA sequence

CTGAATGCATTACTGGCTGACTCAGAAAGAGATAGGCTTGTCAAAAAGCTCAGTCATGCCAACCAGCAGAACAGACTTCTCAAACGACAGCTACATGTAAAGGATGAAGATTTGGTTAACTGTAAGACCGAACTTGCTGCCTTGGACCATGACATTCAGGGTTTGATCAAACTAGCAGAAGAAATAGCACAATCTGGTATACCAGAACGTACGAGAAAGATTAATGGGAAATACATTCAATCTCACCTTCTTACAAAATTAGAAGCTGTACACAAAAAGATAATGGATCAAATAAAAGATGTAGATTTGGTGCAATCAAAAGAAGTTCCACTATTCTGGTATGGAATGGCTGAGAATGTGCAAGTTATGGGAACTTTTGATGGCTGGAGTGTAGGGGAGGATTTATCACCTGAATACACTGGGGCTTACTCTAAGTTCTCGACAACTTTAAGGCTTAGACCTGGGAGGTACGAAATCAAGTTCCTAGTGGATGGAGAATGGCAGCTATCAACAGAATTTCCCACTGTTGGCGAAGGTTTGATGGAAAACAATCTGTTAGTTGTGGAATAG

Coding sequence (CDS)

CTGAATGCATTACTGGCTGACTCAGAAAGAGATAGGCTTGTCAAAAAGCTCAGTCATGCCAACCAGCAGAACAGACTTCTCAAACGACAGCTACATGTAAAGGATGAAGATTTGGTTAACTGTAAGACCGAACTTGCTGCCTTGGACCATGACATTCAGGGTTTGATCAAACTAGCAGAAGAAATAGCACAATCTGGTATACCAGAACGTACGAGAAAGATTAATGGGAAATACATTCAATCTCACCTTCTTACAAAATTAGAAGCTGTACACAAAAAGATAATGGATCAAATAAAAGATGTAGATTTGGTGCAATCAAAAGAAGTTCCACTATTCTGGTATGGAATGGCTGAGAATGTGCAAGTTATGGGAACTTTTGATGGCTGGAGTGTAGGGGAGGATTTATCACCTGAATACACTGGGGCTTACTCTAAGTTCTCGACAACTTTAAGGCTTAGACCTGGGAGGTACGAAATCAAGTTCCTAGTGGATGGAGAATGGCAGCTATCAACAGAATTTCCCACTGTTGGCGAAGGTTTGATGGAAAACAATCTGTTAGTTGTGGAATAG

Protein sequence

LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAEEIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGLMENNLLVVE*

Homology

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BLAST of Cucsa.375380.1 vs. Swiss-Prot
Match: PTST_ARATH (Protein PTST, chloroplastic OS=Arabidopsis thaliana GN=PTST PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.7e-70
Identity = 129/189 (68.25%), Postives = 159/189 (84.13%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L +LL D+ER +LVKKLS ANQQNR LKRQL  ++ ++ N KTELA ++ ++Q L+KLAE
Sbjct: 89  LKSLLIDTERSKLVKKLSEANQQNRFLKRQLKTQEHEITNIKTELALMELEVQALVKLAE 148

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIA  GIP+ +RKI+GKYIQSHLL++L+AV KK+ +QIK V+  QSKEV +FW GMAE+V
Sbjct: 149 EIANLGIPQGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESV 208

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMG+FDGWS  EDLSPEY+  ++KFSTTL LRPGRYE+KFLVDGEWQ+S EFPT GEGL
Sbjct: 209 QVMGSFDGWSQREDLSPEYSALFTKFSTTLFLRPGRYEMKFLVDGEWQISPEFPTSGEGL 268

Query: 181 MENNLLVVE 190
           MENN+LVVE
Sbjct: 269 MENNVLVVE 277

[Close]

BLAST of Cucsa.375380.1 vs. TrEMBL
Match: A0A0A0LAW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G314760 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 5.7e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE
Sbjct: 66  LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 125

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV
Sbjct: 126 EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 185

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL
Sbjct: 186 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 245

Query: 181 MENNLLVVE 190
           MENNLLVVE
Sbjct: 246 MENNLLVVE 254

[Close]

BLAST of Cucsa.375380.1 vs. TrEMBL
Match: M5WCI8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025590mg PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.4e-76
Identity = 143/189 (75.66%), Postives = 167/189 (88.36%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L  LLADSER +L+KKLS ANQQNR LKRQLH+K++ LVN K+ELA L+ +IQ L+KLAE
Sbjct: 104 LKLLLADSERTKLIKKLSEANQQNRFLKRQLHIKEDALVNFKSELAVLELEIQALVKLAE 163

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           E  +S IP+ +RKINGKYIQSHLL++LEAVH+K+ +QIKDVD VQSKEVPLFWYGMAE+V
Sbjct: 164 ENTKSVIPQGSRKINGKYIQSHLLSRLEAVHEKLKEQIKDVDAVQSKEVPLFWYGMAESV 223

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWS GE LS EYTG+++ FSTTL LRPGRYEIKFLVDGEW+LS EFPTVGEGL
Sbjct: 224 QVMGTFDGWSQGEHLSSEYTGSFTAFSTTLMLRPGRYEIKFLVDGEWKLSPEFPTVGEGL 283

Query: 181 MENNLLVVE 190
           M+NNLL+VE
Sbjct: 284 MKNNLLIVE 292

[Close]

BLAST of Cucsa.375380.1 vs. TrEMBL
Match: B9T714_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0307970 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 9.1e-76
Identity = 142/189 (75.13%), Postives = 164/189 (86.77%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L  LLADSERD+LVKKLS ANQ NRLLKRQLH K++ LVN K+ELA ++HDIQ L+ LAE
Sbjct: 100 LKLLLADSERDKLVKKLSEANQHNRLLKRQLHAKEDSLVNFKSELAVVEHDIQALVTLAE 159

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIAQS IPE +RKINGKYIQSHLL++L+ V +K+ +QIKD+D  QSKEV LFW GMAENV
Sbjct: 160 EIAQSVIPEGSRKINGKYIQSHLLSRLQVVREKLKEQIKDIDAAQSKEVHLFWCGMAENV 219

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWS GE LSPEY G+++KF+TTL LRPGRYEIKFLVDGEWQLS E+PTVGEGL
Sbjct: 220 QVMGTFDGWSQGEHLSPEYDGSFTKFTTTLLLRPGRYEIKFLVDGEWQLSAEYPTVGEGL 279

Query: 181 MENNLLVVE 190
            +NNLL+VE
Sbjct: 280 TQNNLLIVE 288

[Close]

BLAST of Cucsa.375380.1 vs. TrEMBL
Match: A0A059AES5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01591 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-75
Identity = 140/189 (74.07%), Postives = 166/189 (87.83%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L ALLAD+ERDRL++KLS ANQQNR LKRQLHVK++ LV  KTELA ++ ++Q L+ LAE
Sbjct: 110 LKALLADTERDRLIRKLSEANQQNRFLKRQLHVKEDALVTFKTELAVMELEVQALVALAE 169

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIA+S IP  TRKINGKYIQSHLL++LEA+HKK+ +++KDVD  +SKEVPLFWYGMAE+V
Sbjct: 170 EIAKSEIPVGTRKINGKYIQSHLLSRLEAIHKKLKEKMKDVDAARSKEVPLFWYGMAESV 229

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWS GE LSPEYTG+++KFSTTL LRPGRYEIKFLVDGEW +S E PTVGEGL
Sbjct: 230 QVMGTFDGWSQGEHLSPEYTGSFTKFSTTLMLRPGRYEIKFLVDGEWHVSPELPTVGEGL 289

Query: 181 MENNLLVVE 190
            +NNLL+VE
Sbjct: 290 TKNNLLIVE 298

[Close]

BLAST of Cucsa.375380.1 vs. TrEMBL
Match: A0A059AFH2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01591 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-75
Identity = 140/189 (74.07%), Postives = 166/189 (87.83%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L ALLAD+ERDRL++KLS ANQQNR LKRQLHVK++ LV  KTELA ++ ++Q L+ LAE
Sbjct: 125 LKALLADTERDRLIRKLSEANQQNRFLKRQLHVKEDALVTFKTELAVMELEVQALVALAE 184

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIA+S IP  TRKINGKYIQSHLL++LEA+HKK+ +++KDVD  +SKEVPLFWYGMAE+V
Sbjct: 185 EIAKSEIPVGTRKINGKYIQSHLLSRLEAIHKKLKEKMKDVDAARSKEVPLFWYGMAESV 244

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWS GE LSPEYTG+++KFSTTL LRPGRYEIKFLVDGEW +S E PTVGEGL
Sbjct: 245 QVMGTFDGWSQGEHLSPEYTGSFTKFSTTLMLRPGRYEIKFLVDGEWHVSPELPTVGEGL 304

Query: 181 MENNLLVVE 190
            +NNLL+VE
Sbjct: 305 TKNNLLIVE 313

[Close]

BLAST of Cucsa.375380.1 vs. TAIR10
Match: AT5G39790.1 (AT5G39790.1 5'-AMP-activated protein kinase-related)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-69
Identity = 129/189 (68.25%), Postives = 157/189 (83.07%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L +LL D+ER +LVKKLS ANQQNR LKRQ H    ++ N KTELA ++ ++Q L+KLAE
Sbjct: 89  LKSLLIDTERSKLVKKLSEANQQNRFLKRQEH----EITNIKTELALMELEVQALVKLAE 148

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIA  GIP+ +RKI+GKYIQSHLL++L+AV KK+ +QIK V+  QSKEV +FW GMAE+V
Sbjct: 149 EIANLGIPQGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESV 208

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMG+FDGWS  EDLSPEY+  ++KFSTTL LRPGRYE+KFLVDGEWQ+S EFPT GEGL
Sbjct: 209 QVMGSFDGWSQREDLSPEYSALFTKFSTTLFLRPGRYEMKFLVDGEWQISPEFPTSGEGL 268

Query: 181 MENNLLVVE 190
           MENN+LVVE
Sbjct: 269 MENNVLVVE 273

[Close]

BLAST of Cucsa.375380.1 vs. TAIR10
Match: AT1G27070.1 (AT1G27070.1 5'-AMP-activated protein kinase-related)

HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1


Query: 111 LFWYGMAENVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLS 170
           + W   A  V + G+FDGWS    +     G    FS +L+L PG+YEIKF+VDG+W++ 
Sbjct: 457 IVWPNSASEVLLTGSFDGWSTQRKMKKAENGV---FSLSLKLYPGKYEIKFIVDGQWKVD 516

Query: 171 TEFPTVGEGLMENNLLVV 189
              P V  G  ENNLL++
Sbjct: 517 PLRPIVTSGGYENNLLII 531

[Close]

BLAST of Cucsa.375380.1 vs. TAIR10
Match: AT5G03420.1 (AT5G03420.1 5'-AMP-activated protein kinase-related)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 1


Query: 48  LDHDIQGLIKLAEEIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSK 107
           LD     L +L E+I +        K++   +Q    T+++     I +  K+V+L +++
Sbjct: 454 LDQKELELSRLKEQIEKE-------KLSLSVLQRQAETEIQKAQMLISE--KEVELQEAE 513

Query: 108 E-------VPLFWYGMAENVQVMGTFDGWS--VGEDLSPEYT-GAYSKFSTTLRLRPGRY 167
           E       V + + G    V+V G+F+GW   VG +L    + G    +ST L L PG Y
Sbjct: 514 ESLSGLQEVVIEYCGDGNAVEVTGSFNGWQHRVGMELQASKSIGKQKCWSTLLWLYPGTY 573

Query: 168 EIKFLVDGEWQLSTEFPTVGEGLMENNLLVVE 190
           EIKF+VDG+W    +  +V  G + NN+L V+
Sbjct: 574 EIKFIVDGQWITDPQKDSVTRGHISNNILKVD 596

[Close]

BLAST of Cucsa.375380.1 vs. NCBI nr
Match: gi|449456196|ref|XP_004145836.1| (PREDICTED: uncharacterized protein LOC101218713 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 8.2e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE
Sbjct: 108 LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 167

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV
Sbjct: 168 EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 227

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL
Sbjct: 228 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 287

Query: 181 MENNLLVVE 190
           MENNLLVVE
Sbjct: 288 MENNLLVVE 296

[Close]

BLAST of Cucsa.375380.1 vs. NCBI nr
Match: gi|700202679|gb|KGN57812.1| (hypothetical protein Csa_3G314760 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 8.2e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE
Sbjct: 66  LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 125

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV
Sbjct: 126 EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 185

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL
Sbjct: 186 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 245

Query: 181 MENNLLVVE 190
           MENNLLVVE
Sbjct: 246 MENNLLVVE 254

[Close]

BLAST of Cucsa.375380.1 vs. NCBI nr
Match: gi|659114426|ref|XP_008457048.1| (PREDICTED: uncharacterized protein LOC103496819 isoform X1 [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 3.4e-100
Identity = 186/189 (98.41%), Postives = 188/189 (99.47%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDH+IQGLIKLAE
Sbjct: 108 LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHEIQGLIKLAE 167

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKI+DQIKDVDLVQSKEVPLFWYGMAENV
Sbjct: 168 EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIVDQIKDVDLVQSKEVPLFWYGMAENV 227

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLS EFPTVGEGL
Sbjct: 228 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSPEFPTVGEGL 287

Query: 181 MENNLLVVE 190
           MENNLLVVE
Sbjct: 288 MENNLLVVE 296

[Close]

BLAST of Cucsa.375380.1 vs. NCBI nr
Match: gi|659114428|ref|XP_008457049.1| (PREDICTED: uncharacterized protein LOC103496819 isoform X2 [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 3.4e-100
Identity = 186/189 (98.41%), Postives = 188/189 (99.47%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDH+IQGLIKLAE
Sbjct: 79  LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHEIQGLIKLAE 138

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKI+DQIKDVDLVQSKEVPLFWYGMAENV
Sbjct: 139 EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIVDQIKDVDLVQSKEVPLFWYGMAENV 198

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLS EFPTVGEGL
Sbjct: 199 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSPEFPTVGEGL 258

Query: 181 MENNLLVVE 190
           MENNLLVVE
Sbjct: 259 MENNLLVVE 267

[Close]

BLAST of Cucsa.375380.1 vs. NCBI nr
Match: gi|645278551|ref|XP_008244284.1| (PREDICTED: uncharacterized protein LOC103342434 [Prunus mume])

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 143/189 (75.66%), Postives = 169/189 (89.42%), Query Frame = 1


Query: 1   LNALLADSERDRLVKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHDIQGLIKLAE 60
           L +LLADSER +L+KKLS ANQQNR LKRQLH+K+++LVN K+ELA L+ +IQ L+KLAE
Sbjct: 111 LKSLLADSERTKLIKKLSEANQQNRFLKRQLHIKEDELVNFKSELAVLELEIQALVKLAE 170

Query: 61  EIAQSGIPERTRKINGKYIQSHLLTKLEAVHKKIMDQIKDVDLVQSKEVPLFWYGMAENV 120
           E  +S IP+ +RKINGKYIQSHLL++LEAVH+K+ +QIKDVD VQSKEVPLFWYGMAE+V
Sbjct: 171 ENTKSVIPQGSRKINGKYIQSHLLSRLEAVHEKLKEQIKDVDAVQSKEVPLFWYGMAESV 230

Query: 121 QVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSTEFPTVGEGL 180
           QVMGTFDGWS GE LS EYTG+++ FSTTL LRPGRYEIKFLVDGEW+LS EFPTVGEGL
Sbjct: 231 QVMGTFDGWSQGEHLSSEYTGSFTAFSTTLMLRPGRYEIKFLVDGEWKLSPEFPTVGEGL 290

Query: 181 MENNLLVVE 190
           M+NNLL+VE
Sbjct: 291 MKNNLLIVE 299

The following BLAST results are available for this feature:

BLAST of Cucsa.375380.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTST_ARATH	3.7e-70	68.25	Protein PTST, chloroplastic OS=Arabidopsis thaliana GN=PTST PE=1 SV=1	[more]

BLAST of Cucsa.375380.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAW5_CUCSA	5.7e-102	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G314760 PE=4 SV=1	[more]
M5WCI8_PRUPE	5.4e-76	75.66	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025590mg PE=4 S...	[more]
B9T714_RICCO	9.1e-76	75.13	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0307970 PE=4 SV=1	[more]
A0A059AES5_EUCGR	1.2e-75	74.07	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01591 PE=4 SV=1	[more]
A0A059AFH2_EUCGR	1.2e-75	74.07	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01591 PE=4 SV=1	[more]

BLAST of Cucsa.375380.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G39790.1	1.5e-69	68.25	5'-AMP-activated protein kinase-related	[more]
AT1G27070.1	3.7e-12	42.31	5'-AMP-activated protein kinase-related	[more]
AT5G03420.1	1.3e-09	30.92	5'-AMP-activated protein kinase-related	[more]

BLAST of Cucsa.375380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456196\|ref\|XP_004145836.1\|	8.2e-102	100.00	PREDICTED: uncharacterized protein LOC101218713 [Cucumis sativus]	[more]
gi\|700202679\|gb\|KGN57812.1\|	8.2e-102	100.00	hypothetical protein Csa_3G314760 [Cucumis sativus]	[more]
gi\|659114426\|ref\|XP_008457048.1\|	3.4e-100	98.41	PREDICTED: uncharacterized protein LOC103496819 isoform X1 [Cucumis melo]	[more]
gi\|659114428\|ref\|XP_008457049.1\|	3.4e-100	98.41	PREDICTED: uncharacterized protein LOC103496819 isoform X2 [Cucumis melo]	[more]
gi\|645278551\|ref\|XP_008244284.1\|	1.5e-76	75.66	PREDICTED: uncharacterized protein LOC103342434 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR014756	Ig_E-set

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0017070	U6 snRNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.375380	Cucsa.375380	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.375380.1	Cucsa.375380.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.375380.1.CDS.6	Cucsa.375380.1.CDS.6	CDS
Cucsa.375380.1.CDS.5	Cucsa.375380.1.CDS.5	CDS
Cucsa.375380.1.CDS.4	Cucsa.375380.1.CDS.4	CDS
Cucsa.375380.1.CDS.3	Cucsa.375380.1.CDS.3	CDS
Cucsa.375380.1.CDS.2	Cucsa.375380.1.CDS.2	CDS
Cucsa.375380.1.CDS.1	Cucsa.375380.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014756	Immunoglobulin E-set	unknown	SSF81296	E set domains	coord: 109..188 score: 5.25
None	No IPR available	unknown	Coil	Coil	coord: 10..30 scor
None	No IPR available	PANTHER	PTHR10343	5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT	coord: 1..189 score: 1.3E
None	No IPR available	PANTHER	PTHR10343:SF61	STARCH BINDING SCAFFOLD PROTEIN-RELATED	coord: 1..189 score: 1.3E