Cucsa.370470.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTCTCTTGCCTTAAAACTAAACCCTCTGTTCCTTCAACCTCCTCTTGCTTTCTCAATCCTTCATCCATTAAAATCTCAAATCTTTTCACCAACCAACAACAAACCATCACTCTTCACAATTCTAAATTTAGGGTTTCTGAAGGTACCTCCCACGACGAGTTATGGGCTGCTGCTTCTCTCCGCGTCCGCACTTTCAATCAATTGCCCCCCGATTCCTTTGGCATCCATGTGAGTCTTCTACATTCCTTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTGTCGTACGTTTATTAGCAATCTATTTATTCAACTGTTAGTGGAACTTGGAAGTTCCATTCTTGATACCCCATTCTCATTTCGATAACTTATATAAAATAAACCTACTCCATAGGTTAAAAGTTTATATACATTAAACTTGACTAACTCATTGTCCACAACTTTATTATTCTTGTTTCGCTCTTGTCATCTTTAATTTTCTGAGAAGTGGGAAACTAATATAAGTTTGTTGAAGTGTGCTTTTAATTTTTGTTACCATTGGTTCGTTATTCTCGATTACAAATATTGTTCACGAACGTACATTTCTATTTTTTCTATAAAAAAAAGCAACAACTTTAATTGAGAATAAATAAAAGAATACAAAGGACAACAAAAAAACACAAGTCTTCCAAAACACCCCAACTAAAGGAAGGGGGTCCTAAGTAAAGTGTTTCCAAGAGAACAATAGCAAACAATAGCAAAAGGTCATTGTAACCGAAGCCCCAAGGGACACATGAAATCTAGCTAAAGACCAAACCTCACTAGGGTTCCAATCCTTACTTCTAAAGACCCTATCATTTCTCACCCCCAAATATCCCAAAGCACAGCACACACCCTAGCCAACCGCAAAAAACGATCTTTCTCTCTAAAAGGCAGATGGAGGCGGAACTCCTCGATTGTCCTGCGAACAGTCCTCTGGCTAGCCAAACTGACACTGAACTCCTATAGAAAAAAACTCCACATGCTGACAATCCCAAAGAAGATGATCAAGGTCTTCCTCGGCCTTCCAACAAAGGATATAACAGAAAGGCCTGACAATTGAAGTTCTCCCCCTAACAAGCCTATCCACAATGTTTACACGATTGAGCAAAAATTGCCAAGTAAAAAACCTAATTTTCTTAGGAACTTTTATCCTTCAAACCACCTTAAAATGACGAGAAATGAGAGAAAGTCAAGAGCTCAAAATAAATGTCTTTCCACAGGTCTCGGTGTGTGCCTTTCACCCTTTCTCCACCCAATCAAAAAGATGGGTGTCATGCTTACTCATAGTGATCTACACCATAAGGATTCGCGCTCGACGGCTAAGTGCCAAAGTCACTTGGCCAACAAAGATTCATTACGAATCCTTAGATTACCAATCTCTAAACCCTCCCTGGTTTATCGGACAACCGACCGCCTCCCAACTAACCAGATGAGATTCCATCCCTTCATCCACCCCTCCCCAAAGGAAATCATGCATACATTTCTCCATGCTCTTACAAACTGAACTAGGTGATAAAAAAAGGGACAAGTAATACACAAGAATGCCACTAAGGATAGACTTTATAAGGGTTAATCTCCCAGTCTTAGAGAAGAACCCTTTCTTCCACCATGCCAGTGTCCTCCGAATCTTTTCACAAACAGGATTCTAAAACATTGTAGCTCTTGGGTTTCCCCCTAATGGAAGTCTCAGGTAGTAAGAAGGAAGCAAACCAACCTCACAACCAAACACCTCCGCACAATTCCTAAGCTTCACAAGATTGTTATTAATACCCAATATTTGGCATTTGTTCCTGTTAATTTTCAGGCCTGACATGTCTTCAAAGAAGCCCACTATATGATTAAAGATAAAAAAGGACTCCTCTTTCACCGAGCAAAACAACATTGTATCATCTGCAAACTGAAGGTGCGATAAGGCCACCTCATTTGCCCCTATTCTAAAAGACTCAATTATATTACCCTCCACACCCTTTAAGATGAGCCAACTTAAAACATCCACGACCAGTGAAAACAAGAAAAGGGACAAAGGATCTTCTTGTCTTAGCCCTTTGGAAGCTTGAATGTCAATCCTTTGGAGATCCTTTAGAAAAATAGAGTATCTCAGATTCCTAACAAAACCCCAAATCAACATCCTCCACTATATCCAAAACCTTTCTTCATCATCACCTTATCCAAAACATTTCAATCAACATCCGTAAGCCTTTTCAAAATCGAGTTTAAGCACCACCCCCTTATTCTTAGATCGATAATCCTCAATGGCTTCATTGCCTTTAACCACTTTCTCCGTCTTCGGAATCCTCACCATACTTCTATTAGTAGTGTGGATCCAATTTTGTTGGGTATATATCTTTTAATGGAATTTCACACATCTTTAATGTTCACACATAAAAGATGGAGATGTCTCTTTATGAAGTGAGTTACTTCTCTCATTGCTAATTGATTTAGATATTGAACTTTGTGTTTATCGAATATTATATTAGAGCATATGAAACCTAAATAGGTAAACAAAAGAGCACCACGTTGACTATTTCGTGTTGGAAAGAATGAAGAGACCTTGCAATTTATAAGATACATGTAATATCTGGTGGTAGAAAGACGATAGTTATAAGTAAAGGAAGATAAAGATGGAAAAATGAACTGTTAGCACTTCTTACTTAAATCCTCCTTTTTCTGATCTCTTGTGATTTAGACTTCACTTTGCATGTATAAGTTTTCTTGCTCTCTTGTATGCTATACTGATGTTGTTCCTTTTTCTTCAAGTTATATTAGGATCATAAGAAGTACTTGGCCGAGCACGAATTTGAAGCAATGAAAGAACGTATTGCGGGGAAAAGGGTTGGGTTTAAAAGAGTATCTTGCATAAATGCTACTCTTCCATTATCAGAAATATCAACCTTAGCTGAAGATTTATGTTCAACATGTAAGGTCTGTTTATTTCTTTATTGTTTCAATATGAATGTGGTATGCTATGGACTTCATTCCTAGATTAACTTCGGAACTAAGTTTCAATCTGTTCAGAAGGTTATGATCTTTGAAGAATAGGAAATTAGTTTAAATACAAACCTATAAGTTCTTATGTTTTATATTTGAAACTTGATTTGAGAGTTCGCGAAAAGTTGAAGAGGTTGTCTAAAGACATTAGTACTTTTCGTCTTATTAAAATGAGAAAGTGAATGATATATTTGCAGGAAAAGCGATGCTTGTGTATTAATGAGGCTGCCTCACCTCACATGAAGTGGGTTGCCTCTGTTGTGTTAGGCGTGTTAATACAATGTATTTGTTTGTTGTTTGAAACAATACTATTTGATATTGTTATGCATGCCAAAGTTATGAGGAAAAAAATCTTAAGCCTAACAAATGATGTCAGTCTTATTCCGGAAAAGGTGAAGTTCTTCTCATGGTCGCCCACCTATAGAAGTCTTAACACTCATGAGAAGCTTAAAAAAAAATTCACACTGCGCTCAGTCCTTTGGTGTGCTGCCTTTGTTTCAATGACAAAGAGACCTTGGACCACTTATTTTTGCACTGTCTTTACTACGAAACCTTGGATTGTTGTTCAAAATCTTTAATTTGGAGTTTTGTCTTCCTAGTAAGGTTGATAGTTGGATGCTTGAAAGGCTTAATAGCACAAAGGTTTTAGTTCGTAGGGTAACATTTTGTAGAGATGTGCTACCTGTTCCCTCTTGTGGTATATTTGGAAATAGAGGAATAGTATAATTTTTTAAAATAACTATACCTCTTTGATTCCTTTTGGACTGTGTTTCAACACACAACTTCTTGGTAGAGCATGAACTACACCAAACACTTTTGCAATTACAGCCTTTTCTATGATTTTCAACAATTGGAAGGACCTTATTTTTTTAGTCTTTCTTGGGGAGGGCCCTCTTGTCCCTTGCCCTTAGGCTGTTTTCTTTTGTTCTTTGAATATATCTGTGTCTTATAAAAAGTATAAACAAATGATCGGTCTTACTAAAAGCATATTCAAAAGATGGGGAAAGAACAAACCATATTCTTGCTATTTTCCTCTCATTATGTTAATGTAGGTTATTATAGTGCAGAAAAGTTAGAGTGTGACTGTAATGTGATAGGCCCCAATTACGATGGTGTATACACGTAGGAAAGGTAGGAAAGTAGTGAGTCAAGCAGAAATTACACTTATAGGTGGTCATGATGTTTGTATTTGTTAGACTGAGTTGTATGGTTGGTTGCTATGAAGCACAATCACTCCATTTTTTGGGAATTGTCCATATCAGACTTGCGGAGATGGACACATTTGATCACATGTCCGACACGCAAATTTTTGTGTCGTTTCTATTTTCTACTTTTAAAATTTTGACATTTTTGGGATACTACCTGTACACGCCTGGAAAACTTTTTTAAAGATAATGGTCCAACCTTTTATATTGGACCCAAATATATAGCACAAATAAATTATATGTTAAACTAAGATTTAAAAAAACCAAAAAACAACAATAACAACAGGAAAGTCCATTTTCTTAACCAAAGATTAAAAAACTGAAGTTAGAAGCCTAAATGTTTCATCTCCTAGAATTGTTAATTAACTTGAAGTTTTATGTCCATTTAGCGGAGTGCATTTAGTACTTTATGTCAAATTTATATATCCTAAAAAAAAGAGAAAAAAATCTGTCCTATTCTTTTTCTACATTAGCGATTGCCATGTCATGTCGTATCATGTCAAGTCCATGTCCATGCCCATGCTTGGTTATATAGATGGCTGGTTGTTTAGTGAGGGTATCTTTTTGCTTCATTTTGGTAATTCTCACAGAGAAGTAGGCGAGGTAGAAAGCTTTCTTGATACAGCTATCTGATCATGAATAAAGTTGTTGTTGAGCAAGGCCTATCAGAATGCTCTGGCCATGTTTTTCCCTTTCTTCCTTTCGTACTTTCTTCCTATTGTTGGTTTTGAGTTGAAGCAGATTTGGCAACCTTATATGTCTTCTCCTGAGCTTTGACTGTATTAATTCTACAAAGTTTTTACTTTGTTCTGATCTACAATTTTACTATCATTTTCAATTTTAGTTTTCTGATAATGGAGAAGATAGAGTTGTTGTTGGGTCACTTGACATTAATCAATGTGTAAGGCTTCCAGACGAAATAACAGGAATGAAACCTGAGGTAAATGATTGTTTTCTTTATTTTTTATAACATTTTGATTTCTGTTTTACATTCTTCTGATAATAAATCATGAACATGTCTCATTATTATTTATGAGCATCAGTGTTACTCTTTAGCTAAATCTCTGTTCAACCTGGAAATTATGATTCCAAATTGGCTATTAGCTTGTTAATCTAGAACCAGTATTCAATAGCTCTTGATTTTTAAGATCTGAATTTGATAGCCAACATGAGTTTTCCATGATTCTCATTGAAAAAGTGTAGTATTGTGTAAAAAACAAAAACTAAGCCCACAAAAGTCCCACAACCAAGTAAGTAAAATATTGCCTAAAGAATGACTACAAAAAGTCTTAAATTTTGTCTTTGAAATCAATGCTCAAAAGGATGTGCCAAATTTTAGCCAGGACCAAACGTCACTAAGTTTTCCCTTTCCATACCTCCAAAAACTCTATTATTTCTTTCACATCGAAGGTCCTATTACAAAGTTCACACTCTGGCAAACCACGTAGAACGACCATTCTCTTTGAAAGGCAGAGGGAGGAGGGTCTTTGATCGAACTGATGAGTCATTGACATTCCTTTAGTGATTGTTTAAGTTCTGTTTACAAAATAGAAACTAGAGAAATAATTGGCTATACCATGTTGGGAACAATATAATTTGTCTTATTGATGAACTGTTTGTGCAACAACCGTGAAAAATGTAAACCTCCCTCCATAAGAAAATATCTTAATTACATGAAGAATTATGCCGATTTGCCAACCTCATCTTCAAACCCAATAGTGAACTACTGATTCCAAAGCCATATTAGGATTAAGCCATATCAATGGTGACGGAAATGTCGATATGGATGAAAATTCTTCAAGAGAACAGAAGAAACAACATTTAGTGGCCAATTAAAATGCCTATTAATTTGTATTATATTTATGTTAATTGTTTATTAGTTATTTTTCATGTAACACAATGAAAATGTCGATTGGACTGCCAGTAGTAAACTCGTAGACATGTAAAAATATCAATAGAACTCTCGATATTTACTTGAGATTTAGATAAACGAGTTGAATTGTCATGGCATCTAAAACATTGTATATATTTCTTTCCATCAGGGAATTGGGGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCTAAGGAACTGCAAAGGAATGGGTTGGGTTATGCTCTTATTGCCAAGGCAAAAACAATTGCACTAGATTGGGGTAATTCTAACCATCTTTACATGCATATTTTATTCCGTTGAGAATCCCACGTTAGAAAAATCAAGGGACTTCGATCTCTAATGAGTTACTTCTCCCGTTGTCAATCGATTTGAGATAGAACCTCATACTATCTAATATATCCAATTTCATTCATATCGTTAACGTGGACCGTTTTTATTCATTTATGAGAAGTAAATGAATGTTATATGTGTGTTTATGTTATATAGGGATAAGCGATCTATACGTGCATGTAGCTTTCAGCAACGAAGGTGGAAAGAAGCTTTACATGAAGAGTGGTTTTGTTTATGAAAGTGATGAACCAAGTTGGCAAGCCAGGTTTCTCGATCGTCCTCGCAGGATTCTCTTTTGGACTCCTCTCTCTCAATTTCCCCTATGATCATTTTCCACCACTTTTTTCCCCCAATTTACTTTAAGTTCTATTCATTGTAAATTTGTATGTAATGGACTTTACTCTATAAAAAAAATAAGAAGAAGAAGAAGAAGAATTCAACGTTTAGAGAC TCTTTCTCTTGCCTTAAAACTAAACCCTCTGTTCCTTCAACCTCCTCTTGCTTTCTCAATCCTTCATCCATTAAAATCTCAAATCTTTTCACCAACCAACAACAAACCATCACTCTTCACAATTCTAAATTTAGGGTTTCTGAAGGTACCTCCCACGACGAGTTATGGGCTGCTGCTTCTCTCCGCGTCCGCACTTTCAATCAATTGCCCCCCGATTCCTTTGGCATCCATGATCATAAGAAGTACTTGGCCGAGCACGAATTTGAAGCAATGAAAGAACGTATTGCGGGGAAAAGGGTTGGGTTTAAAAGAGTATCTTGCATAAATGCTACTCTTCCATTATCAGAAATATCAACCTTAGCTGAAGATTTATGTTCAACATGTAAGTTTTCTGATAATGGAGAAGATAGAGTTGTTGTTGGGTCACTTGACATTAATCAATGTGTAAGGCTTCCAGACGAAATAACAGGAATGAAACCTGAGGGAATTGGGGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCTAAGGAACTGCAAAGGAATGGGTTGGGTTATGCTCTTATTGCCAAGGCAAAAACAATTGCACTAGATTGGGGGATAAGCGATCTATACGTGCATGTAGCTTTCAGCAACGAAGGTGGAAAGAAGCTTTACATGAAGAGTGGTTTTGTTTATGAAAGTGATGAACCAAGTTGGCAAGCCAGGTTTCTCGATCGTCCTCGCAGGATTCTCTTTTGGACTCCTCTCTCTCAATTTCCCCTATGATCATTTTCCACCACTTTTTTCCCCCAATTTACTTTAAGTTCTATTCATTGTAAATTTGTATGTAATGGACTTTACTCTATaaaaaaaataagaagaagaagaagaagaaTTCAACGTTTAGAGAC TCTTTCTCTTGCCTTAAAACTAAACCCTCTGTTCCTTCAACCTCCTCTTGCTTTCTCAATCCTTCATCCATTAAAATCTCAAATCTTTTCACCAACCAACAACAAACCATCACTCTTCACAATTCTAAATTTAGGGTTTCTGAAGGTACCTCCCACGACGAGTTATGGGCTGCTGCTTCTCTCCGCGTCCGCACTTTCAATCAATTGCCCCCCGATTCCTTTGGCATCCATGATCATAAGAAGTACTTGGCCGAGCACGAATTTGAAGCAATGAAAGAACGTATTGCGGGGAAAAGGGTTGGGTTTAAAAGAGTATCTTGCATAAATGCTACTCTTCCATTATCAGAAATATCAACCTTAGCTGAAGATTTATGTTCAACATGTAAGTTTTCTGATAATGGAGAAGATAGAGTTGTTGTTGGGTCACTTGACATTAATCAATGTGTAAGGCTTCCAGACGAAATAACAGGAATGAAACCTGAGGGAATTGGGGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCTAAGGAACTGCAAAGGAATGGGTTGGGTTATGCTCTTATTGCCAAGGCAAAAACAATTGCACTAGATTGGGGGATAAGCGATCTATACGTGCATGTAGCTTTCAGCAACGAAGGTGGAAAGAAGCTTTACATGAAGAGTGGTTTTGTTTATGAAAGTGATGAACCAAGTTGGCAAGCCAGGTTTCTCGATCGTCCTCGCAGGATTCTCTTTTGGACTCCTCTCTCTCAATTTCCCCTATGA SFSCLKTKPSVPSTSSCFLNPSSIKISNLFTNQQQTITLHNSKFRVSEGTSHDELWAAASLRVRTFNQLPPDSFGIHDHKKYLAEHEFEAMKERIAGKRVGFKRVSCINATLPLSEISTLAEDLCSTCKFSDNGEDRVVVGSLDINQCVRLPDEITGMKPEGIGADFARAYLSNVCVAKELQRNGLGYALIAKAKTIALDWGISDLYVHVAFSNEGGKKLYMKSGFVYESDEPSWQARFLDRPRRILFWTPLSQFPL*
BLAST of Cucsa.370470.1 vs. TrEMBL
Match: A0A0A0K1B5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G013950 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 3.3e-145 Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TrEMBL
Match: A0A0B2RNZ3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032946 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 5.7e-89 Identity = 167/261 (63.98%), Postives = 203/261 (77.78%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TrEMBL
Match: I1LVV8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G091800 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 5.7e-89 Identity = 167/261 (63.98%), Postives = 203/261 (77.78%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TrEMBL
Match: A0A067F4Q5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023633mg PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 7.5e-89 Identity = 156/221 (70.59%), Postives = 188/221 (85.07%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TrEMBL
Match: A0A165X845_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_014719 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88 Identity = 160/222 (72.07%), Postives = 189/222 (85.14%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TAIR10
Match: AT4G28030.1 (AT4G28030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 307.4 bits (786), Expect = 8.5e-84 Identity = 152/252 (60.32%), Postives = 185/252 (73.41%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TAIR10
Match: AT2G06025.1 (AT2G06025.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09 Identity = 54/195 (27.69%), Postives = 87/195 (44.62%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. TAIR10
Match: AT2G39000.1 (AT2G39000.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 48.5 bits (114), Expect = 7.1e-06 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. NCBI nr
Match: gi|778722997|ref|XP_011658599.1| (PREDICTED: uncharacterized protein LOC101206225 [Cucumis sativus]) HSP 1 Score: 522.3 bits (1344), Expect = 4.8e-145 Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. NCBI nr
Match: gi|659094224|ref|XP_008447948.1| (PREDICTED: uncharacterized protein LOC103490280 isoform X1 [Cucumis melo]) HSP 1 Score: 501.5 bits (1290), Expect = 8.7e-139 Identity = 245/257 (95.33%), Postives = 251/257 (97.67%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. NCBI nr
Match: gi|955356738|ref|XP_014620850.1| (PREDICTED: uncharacterized protein LOC100802268 isoform X2 [Glycine max]) HSP 1 Score: 335.5 bits (859), Expect = 8.2e-89 Identity = 167/261 (63.98%), Postives = 203/261 (77.78%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. NCBI nr
Match: gi|641843474|gb|KDO62374.1| (hypothetical protein CISIN_1g023633mg [Citrus sinensis]) HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88 Identity = 156/221 (70.59%), Postives = 188/221 (85.07%), Query Frame = 1
BLAST of Cucsa.370470.1 vs. NCBI nr
Match: gi|1021040138|gb|KZM97919.1| (hypothetical protein DCAR_014719 [Daucus carota subsp. sativus]) HSP 1 Score: 334.0 bits (855), Expect = 2.4e-88 Identity = 160/222 (72.07%), Postives = 189/222 (85.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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