Cucsa.340880.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAAGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGACCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCGTGTTTGGGATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG ATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAAGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGACCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCGTGTTTGGGATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG ATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAAGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGACCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCGTGTTTGGGATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLRVWDGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN*
BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LGA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846570 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 2.7e-128 Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LFQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846590 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36 Identity = 108/268 (40.30%), Postives = 139/268 (51.87%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287040 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35 Identity = 91/204 (44.61%), Postives = 123/204 (60.29%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LCQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G847090 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31 Identity = 102/278 (36.69%), Postives = 143/278 (51.44%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TrEMBL
Match: W9QL39_9ROSA (Ankyrin repeat-containing protein OS=Morus notabilis GN=L484_013457 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29 Identity = 79/211 (37.44%), Postives = 125/211 (59.24%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT3G13950.1 (AT3G13950.1 unknown protein) HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21 Identity = 67/194 (34.54%), Postives = 110/194 (56.70%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT4G13266.1 (AT4G13266.1 unknown protein) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 59/184 (32.07%), Postives = 97/184 (52.72%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT5G50140.1 (AT5G50140.1 Ankyrin repeat family protein) HSP 1 Score: 62.0 bits (149), Expect = 5.9e-10 Identity = 44/174 (25.29%), Postives = 83/174 (47.70%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT5G51160.1 (AT5G51160.1 Ankyrin repeat family protein) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09 Identity = 37/125 (29.60%), Postives = 64/125 (51.20%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT1G10340.1 (AT1G10340.1 Ankyrin repeat family protein) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09 Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|700204659|gb|KGN59792.1| (hypothetical protein Csa_3G846570 [Cucumis sativus]) HSP 1 Score: 466.1 bits (1198), Expect = 3.9e-128 Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|778688967|ref|XP_004141215.2| (PREDICTED: ankyrin repeat-containing protein At3g12360 [Cucumis sativus]) HSP 1 Score: 424.9 bits (1091), Expect = 9.8e-116 Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|659128033|ref|XP_008464014.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo]) HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42 Identity = 90/110 (81.82%), Postives = 96/110 (87.27%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|778670062|ref|XP_011649355.1| (PREDICTED: uncharacterized protein LOC101212496 [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41 Identity = 111/270 (41.11%), Postives = 152/270 (56.30%), Query Frame = 1
BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|659093595|ref|XP_008447612.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]) HSP 1 Score: 170.2 bits (430), Expect = 4.4e-39 Identity = 104/260 (40.00%), Postives = 146/260 (56.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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