Cucsa.327950.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATCGGAGACGGAATCAAGCTTTCGCCGGCGGCGGTTCTTCGGTGCTGGAGACGGATTCAGCTCGTGGGTTGGGCCTTAACAATTCGTGGATAACGTTTTCTGAGGCTACTTAATTGGATTAAAGAGGCTGAAAAGCTACGGTAAAGTCGCATTTGTGATTCTCTCTCGTTATAATATCATTGAGTTTGTTTCAATTCATTGTGTCTCTGTATTTGGTAACTTGATCACGTTTTTTCACAATTCAATCCTTTTCAGTTTCTAAAATTTTGTTGATTTTGGTTTGGTTGAATATTTTGTGGCCTTTGTTTGGCAATTCTCAGCTCTGGATTTATGCTGGATTCTGAAATCATTAGATTTCTTAATTGAACTTTGATTTCCTTCTTGATTTTAGGAAAAATATACTTGTTTTTACTCTTATTACTGATCTGAGAAATCCTGTGTAACTTGCTTACAACAGATCGATTGGGTACATAATTGGAGTTCTCTTTATAGAACAATCTTTTACAATCATGTTAGTAGTTTTACAAACATAAACTACGGGTTGTTACGATGTAGCTGATATTCAGGCAGGAACAGAATCTCTCTGCAGATGGATTTTCTTTCTTCTGTTTTAAGGATGGAGTTCTATTGTTTTTTGTCTACTCTTTGTTATGGAGTCTATTGAAATCAAACGTCTTTTGGCCTTCTCTTCAGAGTGTGGAGAAGCCAGGTTGCAACCTGGACAACTTCTCTTTGATCATTTGCATATAATGTCCAAGTTTATTGTTGTCAACATTCTCTTGGTCTCTCTGAAATCCCAATCATATCAATATGTTACAAAATTTTCTATGTATGGCATTAAATTTATTTTGCTTATGTAATTTTGAGATTTTTTTATAAATTAAGGGTAAATGCTTCATAAAGCCTAATTCTTTTAAAGGCTGTTACTTGTGTTTCATCCTTGCAGAATTGCTTAGTTCATAATGACAGCGTTCTCTATGTTATAGAACTGATCTGTGTGCCCTCCCCTTTACAGGAAAGAAGAAAAGAATTATCGGATATGGTAGGTGGTGTACGTATTCAGCTCAATAGATGGCAGCAAGCAGCAGTTGCACTTGGTTCAGCAGTAGGTGCCTTGCTAGATCCACGGCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCTGCTTTTGAAAGAGTCCTTGAAAGGATGAAAAAAAGTGCCGAAGGCAGAGTAAGCCTTTACTCAACTTATTTTATGTTTCACATTCTTCATTATTTTAAAGTATATTCACGAGGAATTAAAATGAAGAACGAATATGCTTATGCCAAGAAGCCATCATAAAATTCACTGTCACTTTGGCTTAGTTATTTCCTTCCTGTTATGCCGTGCTAAAGTTATTTCTCATCTGTTGGATGAGTCAACTTTCTTGAACTTTTTTTTCTTTTTGTAATGCATTGGATTCTAGTAAATTGTTCATCTGAATGTGGAACTTGTTAGGTTAAGCATATACTCTCGACCAAGAGGTCAGAGGTTTGCATCCATCACCCCATGTTGTTGAACTCAAAATATGAAACAAGAAATTTATTGTTCAGGCAGTGTTGATGGAGCGACCACGTGTGTTATCATCAGAGGTTGGGCATGCATGGGACCTTCCATCCAACACCTTTGGAGGTGCATATGCTAATTTCATGGGTTCTAGGAATTTTTCTCCAGATGACCGGCCTCCTGTTCGATTCATGGATACTGAGGAACTTGAGTATGTTGCAATGAGAGCTCGTGAGGTTCATGACTTCTGGCACACCCTGTTTGGTCTTCCCACAAACTTGATCGGTGAGTCAGCACTGAAGGTTATCGAATTTGAGCAAATGCACCTTCCAATGTGCATGCTATCTGTTTTGGGAGGCACAGCAAGATTCAGTGAGAAACAGAGGAAATTGTTCTTCCAGCATTATTTCCCTTGGTCTATTCGTGCTGGCATGCAATGCACAGATCTCATGTGCATATATTATGAGCGACATTTCCATGAGGATTTGAATGATGTTCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTTCCCAAGTTTAACATTTTGCTCGACAAGTAAGATGGTGTAAAATCATCCAGAACTCACTTTTTTGTTTACTTGCAAGTTGCTAATCTAGGCCAGTTTGTAATGACTATTCAAGTGCTGCTTGTTTTTATTCCTTCTTTTTTTTTTCTCTTTTAAATTCAAAGACTTTTTAAGCACTTAGAAAGTCTTTTTGACGAGGCATTTGCATAGTTACCATTTTACTACTACGGCGTTCATATTTGAACTATTTACGTGTTTGAATTGTTTTGGTGTTAAATGTTGGCTTACAATAGTTATGATTGATAATTTATAGGAAATCGTGGTCATAAGAGCCTAGCAGGCTCATCTCCATCCATCTTGATGTCGTCATTCATGCCTGTCGTCTGAATATTCTCCCGATAAGGTACGTAGCTAACAGCCATGTTTAACTTTAGACTATCCGACTTCATAAATTTTCATTGAGCAAATTTATTGTCTAGGTGTGCCTTATTGCCTATATTGATCATGGGATCGTGAATGAAAAATAAGGAAGGATATAATTTATTTAGAGTTAACCTCTGATACTAAAATGTAAAGAAACCCTTTATCATTATGATTGCATCTAATAACCATGTTGAAAAAACCGATAATTTGGTCTCGATCCATAAAATAGACTAGAGTGTAGATTACTTGGGTGATCAAACAAATCTAGGATCCTCCCATCAACACTTGATCTTCAAAACACTTCACAAGCAAATCTAGGATCGAACAAAAGTTGTCGCTCCCATCAACACCTAATCTTCAAAACACTTAAGATAAATAAATTCGAAACATAAATTCAAAACACAAAAGGTTTCAAGTTTAAAACCCAAAATAATACATTTTCAAAATTAATTTGTTAATACAAACTACATAGCTGTATTTAACATTAAAATGAAACTTTAGACATTCTATAAGGCATTTCAAGAACTTCTTTCAATTTCATGATCACTATTAACTCTCGTGTAAGTAAATGTAATCTGAAAAGCAAATAAAAAGAGTAAAAACAGAAAATACATTTAATCCACAACATAGAGCCTAAATTATTTGTTTTTAAATAGCAATCCAAAAAGAAATTGTAACTATCCAGTGAAGTTGACTAGAAGTAGCTTGACATCTTTGTTCCCCTGAATGAAAGTTTGATGCTTCTTTATTCCATTTCAATTGTAGATTTTGACAACATGTAGAATTCGTTCTTAAAATCTTTCTCCGAAGTCATATGGCATGATTGAGATGCCTCTGTTTGTATTAGATCGAATTATGTTTCTTGATTCTCAATA TAATCGGAGACGGAATCAAGCTTTCGCCGGCGGCGGTTCTTCGGTGCTGGAGACGGATTCAGCTCGTGGGTTGGGCCTTAACAATTCGTGGATAACGTTTTCTGAGGCTACTTAATTGGATTAAAGAGGCTGAAAAGCTACGGAAAGAAGAAAAGAATTATCGGATATGGTAGGTGGTGTACGTATTCAGCTCAATAGATGGCAGCAAGCAGCAGTTGCACTTGGTTCAGCAGTAGGTGCCTTGCTAGATCCACGGCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCTGCTTTTGAAAGAGTCCTTGAAAGGATGAAAAAAAGTGCCGAAGGCAGAGCAGTGTTGATGGAGCGACCACGTGTGTTATCATCAGAGGTTGGGCATGCATGGGACCTTCCATCCAACACCTTTGGAGGTGCATATGCTAATTTCATGGGTTCTAGGAATTTTTCTCCAGATGACCGGCCTCCTGTTCGATTCATGGATACTGAGGAACTTGAGTATGTTGCAATGAGAGCTCGTGAGGTTCATGACTTCTGGCACACCCTGTTTGGTCTTCCCACAAACTTGATCGGTGAGTCAGCACTGAAGGTTATCGAATTTGAGCAAATGCACCTTCCAATGTGCATGCTATCTGTTTTGGGAGGCACAGCAAGATTCAGTGAGAAACAGAGGAAATTGTTCTTCCAGCATTATTTCCCTTGGTCTATTCGTGCTGGCATGCAATGCACAGATCTCATGTGCATATATTATGAGCGACATTTCCATGAGGATTTGAATGATGTTCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTTCCCAAGTTTAACATTTTGCTCGACAAGAAATCGTGGTCATAAGAGCCTAGCAGGCTCATCTCCATCCATCTTGATGTCGTCATTCATGCCTGTCGTCTGAATATTCTCCCGATAAGATTTTGACAACATGTAGAATTCGTTCTTAAAATCTTTCTCCGAAGTCATATGGCATGATTGAGATGCCTCTGTTTGTATTAGATCGAATTATGTTTCTTGATTCTCAATA ATGGTAGGTGGTGTACGTATTCAGCTCAATAGATGGCAGCAAGCAGCAGTTGCACTTGGTTCAGCAGTAGGTGCCTTGCTAGATCCACGGCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCTGCTTTTGAAAGAGTCCTTGAAAGGATGAAAAAAAGTGCCGAAGGCAGAGCAGTGTTGATGGAGCGACCACGTGTGTTATCATCAGAGGTTGGGCATGCATGGGACCTTCCATCCAACACCTTTGGAGGTGCATATGCTAATTTCATGGGTTCTAGGAATTTTTCTCCAGATGACCGGCCTCCTGTTCGATTCATGGATACTGAGGAACTTGAGTATGTTGCAATGAGAGCTCGTGAGGTTCATGACTTCTGGCACACCCTGTTTGGTCTTCCCACAAACTTGATCGGTGAGTCAGCACTGAAGGTTATCGAATTTGAGCAAATGCACCTTCCAATGTGCATGCTATCTGTTTTGGGAGGCACAGCAAGATTCAGTGAGAAACAGAGGAAATTGTTCTTCCAGCATTATTTCCCTTGGTCTATTCGTGCTGGCATGCAATGCACAGATCTCATGTGCATATATTATGAGCGACATTTCCATGAGGATTTGAATGATGTTCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTTCCCAAGTTTAA MVGGVRIQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLMERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFSEKQRKLFFQHYFPWSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPSSQV*
BLAST of Cucsa.327950.1 vs. Swiss-Prot
Match: COQ4_ARATH (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thaliana GN=At2g03690 PE=2 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.5e-105 Identity = 177/216 (81.94%), Postives = 197/216 (91.20%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. Swiss-Prot
Match: COQ4_AEDAE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti GN=AAEL014646 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.8e-48 Identity = 93/214 (43.46%), Postives = 136/214 (63.55%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. Swiss-Prot
Match: COQ4_DROAN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananassae GN=GF24309 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.3e-45 Identity = 87/214 (40.65%), Postives = 136/214 (63.55%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. Swiss-Prot
Match: COQ4_DROPE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila persimilis GN=GL15483 PE=3 SV=2) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44 Identity = 84/214 (39.25%), Postives = 135/214 (63.08%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. Swiss-Prot
Match: COQ4_DROPS (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA16732 PE=3 SV=3) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44 Identity = 84/214 (39.25%), Postives = 135/214 (63.08%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. TrEMBL
Match: A0A0A0KFN6_CUCSA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis sativus GN=Csa_6G366570 PE=3 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 7.2e-128 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. TrEMBL
Match: M5Y370_PRUPE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Prunus persica GN=PRUPE_ppa010913mg PE=3 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 3.3e-112 Identity = 192/221 (86.88%), Postives = 211/221 (95.48%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. TrEMBL
Match: W9RAI6_9ROSA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Morus notabilis GN=L484_026439 PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.2e-112 Identity = 193/225 (85.78%), Postives = 211/225 (93.78%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. TrEMBL
Match: F6GVM5_VITVI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Vitis vinifera GN=VIT_01s0137g00660 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.1e-111 Identity = 188/222 (84.68%), Postives = 210/222 (94.59%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. TrEMBL
Match: B9HIF7_POPTR (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Populus trichocarpa GN=POPTR_0008s09670g PE=3 SV=2) HSP 1 Score: 408.7 bits (1049), Expect = 4.7e-111 Identity = 191/221 (86.43%), Postives = 210/221 (95.02%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. TAIR10
Match: AT2G03690.1 (AT2G03690.1 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein) HSP 1 Score: 383.6 bits (984), Expect = 8.2e-107 Identity = 177/216 (81.94%), Postives = 197/216 (91.20%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. NCBI nr
Match: gi|449452835|ref|XP_004144164.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucumis sativus]) HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-127 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. NCBI nr
Match: gi|659089309|ref|XP_008445438.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucumis melo]) HSP 1 Score: 459.5 bits (1181), Expect = 3.3e-126 Identity = 221/226 (97.79%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. NCBI nr
Match: gi|596298903|ref|XP_007227569.1| (hypothetical protein PRUPE_ppa010913mg [Prunus persica]) HSP 1 Score: 412.5 bits (1059), Expect = 4.7e-112 Identity = 192/221 (86.88%), Postives = 211/221 (95.48%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. NCBI nr
Match: gi|703081069|ref|XP_010091591.1| (Ubiquinone biosynthesis protein COQ4-like protein [Morus notabilis]) HSP 1 Score: 412.1 bits (1058), Expect = 6.1e-112 Identity = 193/225 (85.78%), Postives = 211/225 (93.78%), Query Frame = 1
BLAST of Cucsa.327950.1 vs. NCBI nr
Match: gi|743783095|ref|XP_011018761.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like [Populus euphratica]) HSP 1 Score: 410.2 bits (1053), Expect = 2.3e-111 Identity = 192/221 (86.88%), Postives = 211/221 (95.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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