Cucsa.301940.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.301940.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	scaffold02951 : 154128 .. 154776 (-)
Sequence length	649

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCCTTTCAACTTTCAAGAGAGATCCATCTTGAAAAAGGAAGAAAAACAAAAACCCCTAATGGCTTCCAAAGCTGCAGCCTCGCTTGCTTTCCTCCTCTCTCTCAATCTCCTATTCTTCACCTTAGTATCAGCATGTGACACTTGCTATGTCCCTGCCCCACCCAAGCCCAAGCCATGCCCTCCTACTAAACCAAACCCTCCATCTAACTATGGAAAGTGTCCCAAGGACACCCTTAAAATCGGCGTCTGTGCCAAGCTTCTTGGTGGCCTCGTCGACCTTACCATCGGCAAGCCCCCAGTGACCCCATGTTGCACCTTGGTTCAAGGACTTGCTGATCTTGAAGCCGCGGTCTGCCTTTGCACTGCCATTAAGGCTAGCGTTTTAGGGAACAAGATTAAAATCCCACTCCACCTCAGCTTGCTCCTTAACGTTTGCAACAAGAATCTTCCCAATGGATTCCAGTGCTGATTTTAGTGTTTTTTCTATTCTTAAATTCTTTGAGTGTGTTTTGATGTTTGTGGTTCCATAGTTGTCTAAGTATTATAACTCATTGCAAAGGGTCTAAGTTGTTTAATTTTCTTAATTGGAGCTATTCCTTTTGGAGTTGAAATGTTTCAATAAAAGTTTGCCATATTGGTGAATTT

mRNA sequence

AAAATCCTTTCAACTTTCAAGAGAGATCCATCTTGAAAAAGGAAGAAAAACAAAAACCCCTAATGGCTTCCAAAGCTGCAGCCTCGCTTGCTTTCCTCCTCTCTCTCAATCTCCTATTCTTCACCTTAGTATCAGCATGTGACACTTGCTATGTCCCTGCCCCACCCAAGCCCAAGCCATGCCCTCCTACTAAACCAAACCCTCCATCTAACTATGGAAAGTGTCCCAAGGACACCCTTAAAATCGGCGTCTGTGCCAAGCTTCTTGGTGGCCTCGTCGACCTTACCATCGGCAAGCCCCCAGTGACCCCATGTTGCACCTTGGTTCAAGGACTTGCTGATCTTGAAGCCGCGGTCTGCCTTTGCACTGCCATTAAGGCTAGCGTTTTAGGGAACAAGATTAAAATCCCACTCCACCTCAGCTTGCTCCTTAACGTTTGCAACAAGAATCTTCCCAATGGATTCCAGTGCTGATTTTAGTGTTTTTTCTATTCTTAAATTCTTTGAGTGTGTTTTGATGTTTGTGGTTCCATAGTTGTCTAAGTATTATAACTCATTGCAAAGGGTCTAAGTTGTTTAATTTTCTTAATTGGAGCTATTCCTTTTGGAGTTGAAATGTTTCAATAAAAGTTTGCCATATTGGTGAATTT

Coding sequence (CDS)

ATGGCTTCCAAAGCTGCAGCCTCGCTTGCTTTCCTCCTCTCTCTCAATCTCCTATTCTTCACCTTAGTATCAGCATGTGACACTTGCTATGTCCCTGCCCCACCCAAGCCCAAGCCATGCCCTCCTACTAAACCAAACCCTCCATCTAACTATGGAAAGTGTCCCAAGGACACCCTTAAAATCGGCGTCTGTGCCAAGCTTCTTGGTGGCCTCGTCGACCTTACCATCGGCAAGCCCCCAGTGACCCCATGTTGCACCTTGGTTCAAGGACTTGCTGATCTTGAAGCCGCGGTCTGCCTTTGCACTGCCATTAAGGCTAGCGTTTTAGGGAACAAGATTAAAATCCCACTCCACCTCAGCTTGCTCCTTAACGTTTGCAACAAGAATCTTCCCAATGGATTCCAGTGCTGA

Protein sequence

MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC*

Homology

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BLAST of Cucsa.301940.1 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.4e-40
Identity = 74/136 (54.41%), Postives = 99/136 (72.79%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           M SK +AS+A   +LN+LFF LVS+ + C  P  PKPKP P   P P  + GKCP+D LK
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           +GVCA +L  + ++ IG PP  PCC+L++GL +LEAAVCLCTAIKA++LG  + +P+ LS
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           L+LN C K +PNGF+C
Sbjct: 121 LVLNNCGKQVPNGFEC 136

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BLAST of Cucsa.301940.1 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.9e-36
Identity = 74/167 (44.31%), Postives = 104/167 (62.28%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAP-------PKPKPCPPTKPNP------ 60
           MASK +AS+A   +LN++FFTL +A D    P+P       PKPKP P  KP P      
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60

Query: 61  ------------------PSNYGKCPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQ 120
                             P + G CP D L++GVCA +L  L+++ +G+P   PCC+L+Q
Sbjct: 61  PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120

Query: 121 GLADLEAAVCLCTAIKASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
           GL DL+AA+CLCTA++A+VLG  + +P+ LS+LLNVCN+ +P+GFQC
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167

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BLAST of Cucsa.301940.1 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-34
Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAP-------PKPKP--CPP--------- 60
           MASK +ASLA   +LN+LFFTL  A +    P+P       PKPKP  CPP         
Sbjct: 1   MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60

Query: 61  -----TKPNPPSNYGK-CPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEA 120
                T P  P + G  CP D LK+GVCA +L  L+++ +G+P    CC+L+QGL D++A
Sbjct: 61  NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120

Query: 121 AVCLCTAIKASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
           A+CLCTA++A+VLG  + +P+ LS+LLNVCN+ LP+GFQC
Sbjct: 121 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQC 160

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BLAST of Cucsa.301940.1 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-31
Identity = 56/105 (53.33%), Postives = 79/105 (75.24%), Query Frame = 1


Query: 32  PAPPKPKPCPPTKPNPPSNYGKCPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGL 91
           P+ P P P P T P  P + G CP D L++GVCA +L GL+++ +G+P   PCC+L+QGL
Sbjct: 72  PSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGL 131

Query: 92  ADLEAAVCLCTAIKASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
            DL+AA+CLCTA++A+VLG  + +P+ LS+LLNVCN+ LP+ FQC
Sbjct: 132 VDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQC 176

HSP 2 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 51/177 (28.81%), Postives = 72/177 (40.68%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCP------PTKPNPPSNYGKC 60
           MASK + SLA   +LN+LFFTL +A D C     PKP+  P      P  P+P       
Sbjct: 1   MASKNSTSLALFFALNILFFTLTTATD-CRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSV 60

Query: 61  PKDTLKIGVCAKLLGGLVDLTIGKPPVTP---------------CCTLVQGLADLEAAVC 120
           P  ++             + T   PP TP               C  ++ GL +++    
Sbjct: 61  PTPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQP 120

Query: 121 LCTAIK--------------------ASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
                                     A+VLG  + +P+ LS+LLNVCN+ LP+ FQC
Sbjct: 121 SAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQC 176

[Close]

BLAST of Cucsa.301940.1 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.1e-31
Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 1


Query: 32  PAPPKPKPCPPTKPNPPSNYGKCPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGL 91
           P+ P P P P   P  P + G CP D L++GVCA +L GL+++ +G+P   PCC+L+QGL
Sbjct: 77  PSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGL 136

Query: 92  ADLEAAVCLCTAIKASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
            DL+AAVCLCTA++A+VLG  + +P+ LS+LLNVCN+ LP+ FQC
Sbjct: 137 VDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQC 181

HSP 2 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 55/182 (30.22%), Postives = 75/182 (41.21%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTK--------PNPPSNYG 60
           MASK +ASLA   +LN+LFFTL +A   C     PKP+P P  K        P+ PS Y 
Sbjct: 1   MASKNSASLALFFALNILFFTL-TAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYV 60

Query: 61  KCPKDTLKIGVCAKLLGGLV---DLTIGKPPVTP---------------CCTLVQGLADL 120
             P           +    V   + T   PP TP               C  ++ GL ++
Sbjct: 61  PTPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNV 120

Query: 121 EAAVCLCTAIK--------------------ASVLGNKIKIPLHLSLLLNVCNKNLPNGF 137
           +                              A+VLG  + +P+ LS+LLNVCN+ LP+ F
Sbjct: 121 QLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNF 180

[Close]

BLAST of Cucsa.301940.1 vs. TrEMBL
Match: A0A0A0KMW2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161880 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-74
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK
Sbjct: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

[Close]

BLAST of Cucsa.301940.1 vs. TrEMBL
Match: A0A0A0KKL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161890 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-72
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA+ASLAFLLSLNLLFFT VSACD CYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK
Sbjct: 1   MASKASASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLGNKIKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVKGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

[Close]

BLAST of Cucsa.301940.1 vs. TrEMBL
Match: A0A0A0KP86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161860 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-71
Identity = 130/136 (95.59%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA ASLAFLLSLNLLFFT VSACD CYVPAPPKPKPCPPTKPNPPSNYGKCPKD LK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

[Close]

BLAST of Cucsa.301940.1 vs. TrEMBL
Match: A0A0A0KKU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161870 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.2e-62
Identity = 119/136 (87.50%), Postives = 124/136 (91.18%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA ASLAFLLSLNLLFFTLVS+CD CYVPAPPKP+P P      PS+YGKCPKD LK
Sbjct: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYP------PSDYGKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LL+NVCNKNLPNGFQC
Sbjct: 121 LLINVCNKNLPNGFQC 130

[Close]

BLAST of Cucsa.301940.1 vs. TrEMBL
Match: A0A0A0KR89_CUCSA (HyPRP2 OS=Cucumis sativus GN=Csa_5G161900 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-59
Identity = 109/140 (77.86%), Postives = 123/140 (87.86%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60
           MASKA  SLAFLLSLNLLFFTLVSAC+ CY+P PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKATTSLAFLLSLNLLFFTLVSACNNCYIPDPPKPKPCPPTKPTPKPSPSSGYGKCPR 60

Query: 61  DTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIP 120
           DTLK+GVCAKLLGGL+D+TIGKPPVTPCC+L++GLADLEAAVCLCTAIKA +LG  + +P
Sbjct: 61  DTLKLGVCAKLLGGLLDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKADILGINLNVP 120

Query: 121 LHLSLLLNVCNKNLPNGFQC 137
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LSLSLLLNVCQKNVPKGFQC 140

[Close]

BLAST of Cucsa.301940.1 vs. TAIR10
Match: AT1G12090.1 (AT1G12090.1 extensin-like protein)

HSP 1 Score: 183.7 bits (465), Expect = 7.5e-47
Identity = 86/137 (62.77%), Postives = 107/137 (78.10%), Query Frame = 1


Query: 5   AAASLAFLLSLNLLFFTLVSACDTCYVPA-----PPKPKPCPPTKPNPPSNYGKCPKDTL 64
           A++S+A  L+LNLLFFT +SAC +C  P       PKPKP P   P+P S   KCPKDTL
Sbjct: 2   ASSSIALFLALNLLFFTTISACGSC-TPCGGGCPSPKPKPTPKPTPSPSSGSSKCPKDTL 61

Query: 65  KIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHL 124
           K+GVCA +L GL+DLT+GKPPV PCC+L+QGLAD+EAAVCLCTA+KA++LG  + +P+ L
Sbjct: 62  KLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLPISL 121

Query: 125 SLLLNVCNKNLPNGFQC 137
           SLLLNVC+K LP GFQC
Sbjct: 122 SLLLNVCSKQLPPGFQC 137

[Close]

BLAST of Cucsa.301940.1 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 1.4e-45
Identity = 87/149 (58.39%), Postives = 105/149 (70.47%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAP---------PKPKPCPPTKPNPPSN- 60
           MAS+   SLA  L LN LFFT +SAC  C  P+P         PKPKP P  KP P  + 
Sbjct: 1   MASRTTKSLALFLILNFLFFTTISACGNCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSP 60

Query: 61  ---YGKCPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKAS 120
                KCP+D LK+GVCA +L GL+++T+GKPPV PCCTL+QGLADLEAA CLCTA+KA+
Sbjct: 61  SPAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 120

Query: 121 VLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
           +LG  + IPL LSLLLNVC+K +P GFQC
Sbjct: 121 ILGINLNIPLSLSLLLNVCSKKVPRGFQC 149

[Close]

BLAST of Cucsa.301940.1 vs. TAIR10
Match: AT2G45180.1 (AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 7.5e-39
Identity = 79/136 (58.09%), Postives = 99/136 (72.79%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA A  A L++LNLLFFT V++  T   P  PKP   P +    P+    CP DTLK
Sbjct: 1   MASKALAVTALLITLNLLFFTFVTS--TKCPPTTPKPPKTPKSPKKAPAVKPTCPTDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           +GVCA LLG LV++ +G PP TPCCTL+QGLA+LEAAVCLCTA+KA+VLG  + +P+ L+
Sbjct: 61  LGVCADLLG-LVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINLNVPIDLT 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLN C K +P+GFQC
Sbjct: 121 LLLNYCGKKVPHGFQC 133

[Close]

BLAST of Cucsa.301940.1 vs. TAIR10
Match: AT4G12480.1 (AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37
Identity = 74/167 (44.31%), Postives = 104/167 (62.28%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAP-------PKPKPCPPTKPNP------ 60
           MASK +AS+A   +LN++FFTL +A D    P+P       PKPKP P  KP P      
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60

Query: 61  ------------------PSNYGKCPKDTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQ 120
                             P + G CP D L++GVCA +L  L+++ +G+P   PCC+L+Q
Sbjct: 61  PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120

Query: 121 GLADLEAAVCLCTAIKASVLGNKIKIPLHLSLLLNVCNKNLPNGFQC 137
           GL DL+AA+CLCTA++A+VLG  + +P+ LS+LLNVCN+ +P+GFQC
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167

[Close]

BLAST of Cucsa.301940.1 vs. TAIR10
Match: AT4G12510.1 (AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 1.9e-37
Identity = 75/136 (55.15%), Postives = 94/136 (69.12%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASK +ASL   L+ N+LFFTL +AC      + PKPKP        P + G CPKDTLK
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGG-CSSTPKPKP-------KPKSTGSCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           +GVCA +L  L+ + +G PPV PCC+L+ GL DLEAA CLCTA+KA VLG  + +P+ LS
Sbjct: 61  LGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVC K +P+GF C
Sbjct: 121 LLLNVCGKKVPSGFVC 128

[Close]

BLAST of Cucsa.301940.1 vs. NCBI nr
Match: gi|449469408|ref|XP_004152412.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-74
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK
Sbjct: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

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BLAST of Cucsa.301940.1 vs. NCBI nr
Match: gi|778700007|ref|XP_004152411.2| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-72
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA+ASLAFLLSLNLLFFT VSACD CYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK
Sbjct: 1   MASKASASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLGNKIKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVKGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

[Close]

BLAST of Cucsa.301940.1 vs. NCBI nr
Match: gi|659073517|ref|XP_008437102.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-72
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA ASLAFLLSLNLLFFT VSACD CYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLGNKIKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

[Close]

BLAST of Cucsa.301940.1 vs. NCBI nr
Match: gi|778708270|ref|XP_011656155.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 5.4e-71
Identity = 130/136 (95.59%), Postives = 131/136 (96.32%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           +ASKA ASLAFLLSLNLLFFT VSACD CYVPAPPKPKPCPPTKPNPPSNYGKCPKD LK
Sbjct: 98  VASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDALK 157

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV GLADLEAAVCLCTAIKASVLGNKIKIPLHLS
Sbjct: 158 IGVCAKLLGGLVDLTIGKPPVTPCCTLVHGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 217

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 218 LLLNVCNKNLPNGFQC 233

[Close]

BLAST of Cucsa.301940.1 vs. NCBI nr
Match: gi|778708270|ref|XP_011656155.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-22
Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA A+LAFLL+LNL FF+LV A +  YV + P   P          +  KC K+TLK
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIH-------EDGKKCLKNTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           +GVCAKLLG LVD+T+GK   + CC L+QGLADL+AAVCLC+A+KASV  +K    L   
Sbjct: 61  LGVCAKLLGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASV-ASKATASLAFL 114

Query: 121 LLLNV 126
           L LN+
Sbjct: 121 LSLNL 114

HSP 2 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 130/136 (95.59%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKPNPPSNYGKCPKDTLK 60
           MASKA ASLAFLLSLNLLFFT VSACD CYVPAPPKPKPCPPTKPNPPSNYGKCPKD LK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120
           IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIPLHLS 120

Query: 121 LLLNVCNKNLPNGFQC 137
           LLLNVCNKNLPNGFQC
Sbjct: 121 LLLNVCNKNLPNGFQC 136

The following BLAST results are available for this feature:

BLAST of Cucsa.301940.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
14KD_DAUCA	8.4e-40	54.41	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	[more]
ERLI1_ARATH	1.9e-36	44.31	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1	[more]
ERLL1_ARATH	1.1e-34	47.50	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1	[more]
ERLL3_ARATH	1.4e-31	53.33	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ...	[more]
ERLL2_ARATH	7.1e-31	53.33	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ...	[more]

BLAST of Cucsa.301940.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMW2_CUCSA	2.8e-74	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161880 PE=4 SV=1	[more]
A0A0A0KKL9_CUCSA	2.0e-72	97.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161890 PE=4 SV=1	[more]
A0A0A0KP86_CUCSA	8.3e-71	95.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161860 PE=4 SV=1	[more]
A0A0A0KKU4_CUCSA	9.2e-62	87.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161870 PE=4 SV=1	[more]
A0A0A0KR89_CUCSA	1.9e-59	77.86	HyPRP2 OS=Cucumis sativus GN=Csa_5G161900 PE=4 SV=1	[more]

BLAST of Cucsa.301940.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12090.1	7.5e-47	62.77	extensin-like protein	[more]
AT1G62510.1	1.4e-45	58.39	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G45180.1	7.5e-39	58.09	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12480.1	1.1e-37	44.31	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12510.1	1.9e-37	55.15	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cucsa.301940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469408\|ref\|XP_004152412.1\|	4.0e-74	100.00	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]
gi\|778700007\|ref\|XP_004152411.2\|	2.8e-72	97.06	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]
gi\|659073517\|ref\|XP_008437102.1\|	2.8e-72	97.06	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo]	[more]
gi\|778708270\|ref\|XP_011656155.1\|	5.4e-71	95.59	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]
gi\|778708270\|ref\|XP_011656155.1\|	1.2e-22	54.40	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.301940	Cucsa.301940	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.301940.1	Cucsa.301940.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301940.1.five_prime_UTR.1	Cucsa.301940.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301940.1.CDS.1	Cucsa.301940.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301940.1.three_prime_UTR.1	Cucsa.301940.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 54..136 score: 4.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 57..136 score: 7.78
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 53..136 score: 2.3
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 52..136 score: 2.9
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..136 score: 1.7
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score: