Cucsa.301860.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.301860.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Leukocyte receptor cluster member 1
Location	scaffold02951 : 105162 .. 107521 (-)
Sequence length	1339

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCCCCACGCCACGGCGCGCCTTTTCTCACCTTCTCCTCGCCCTTTCCCCTTAGCCTGTCCGCCAACGTCCAGGCCACCGCCGACGTCACTGCCGGTTAACGCTAGTATATGTTACAGCTTCAACACCGGAGCTCGAGCTTAGGTTTTTCATCTCTTCTGTTTCATTTTCTGATCTACGTTTCTTTTGTTTTAATTTTTTCGGCGTTGAATCGTTTTTTTCTTCCCCTTCTTTTGTTTTTTGTTGATTTGGTTTGGTTTAGATCTGTTTGGAATTTATGATTTCGAGATGGATTATGACGCCCACCCCAATTTCCCTATCCTTTCTAATCTGTTGCGGATGAACAACTTTCTCTTCTAATCTTGAAATTAAATTCAATTACGTGTTCCCTTGGAAACCCTAATTTTGTCTCTCGCTCTCGTTCTCGTTCTCGTTCCTTCGCCCTTTTTTACTTTCTGGGAATATCTGGAAGTTGCTTGGCGAATTTTTTTTTTCGTATGAAATTGTGTTAATTTGCCTTGTGCATCTAACTATTGTTCCCGGCACTTATTTTTAAATTGTTAGCCTGCAGGTGAATTATAATCTTAGTTTCTTAGATTTTGGTTGATATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTAAGCATATATTAAGCTAACAACAATGTTCTTGTCATTGTTCTTTATTTTGGAGGGTCCATGTTACGTTATTTCTCAAGTCACATAAAAGTGTTCAAGGCGCTGAAAGGAAATAGCAAATGAGATGAGTAGAAAATAGTAGATACTATAACAAAGAAGGATTATTTGAAATAGTGATTCCTAGTTAACTTTAGGTTATAATAGTCGGACACATCAATTATTATATTTAGACCAGAGTATTTAACTTCTAATGGGATTCTAGAGTCTAATTGATATCAGATGATAGGGACTTAGAGAGCTAACCAGAAGTTCAATTCCACATGAGAACTAACTAGAAGTTCTGTTTCTTACATTCATCAAGAACAGTTAGATACGACAAAGTAATATTCACTTTTCTGAAGTTCACAATTTTGTTGAAACATATTGTATCACTACATTTCATTCACCTAGCATTCTAGATTATTTAGGCCCTTTTGATGGGTTCTGCTACATGTGATTAATTTTAACATATGAACATGCTAGGAGAAGAAAAGCTTCATTGAATTGATTAGAGAGAAAAAAAACTAATTTTTATTTGAACTCCTTTCTATGCAGGTGGAAATCCAGAAGATAAAGACTCAGGTTTTCTGGATCACGAATGATTTTATCTTGGCTTTAGCTCAGTTTTTTAAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCCAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACATGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAAGAAGGCTATCAAATGTCCTAGCTAATTAAAATACAATTGTTCAAATGACATAATTAAATGGTAAATTATCACTATCAATCATGTTTTGAGCTGTTGA

mRNA sequence

GTTTTCCCCACGCCACGGCGCGCCTTTTCTCACCTTCTCCTCGCCCTTTCCCCTTAGCCTGTCCGCCAACGTCCAGGCCACCGCCGACGTCACTGCCGGTTAACGCTAGTATATGTTACAGCTTCAACACCGGAGCTCGAGCTTAGGTGAATTATAATCTTAGTTTCTTAGATTTTGGTTGATATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTGGAAATCCAGAAGATAAAGACTCAGGTTTTCTGGATCACGAATGATTTTATCTTGGCTTTAGCTCAGTTTTTTAAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCCAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACATGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAAGAAGGCTATCAAATGTCCTAGCTAATTAAAATACAATTGTTCAAATGACATAATTAAATGGTAAATTATCACTATCAATCATGTTTTGAGCTGTTGA

Coding sequence (CDS)

ATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTGGAAATCCAGAAGATAA

Protein sequence

MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR*

Homology

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BLAST of Cucsa.301860.2 vs. Swiss-Prot
Match: LENG1_MOUSE (Leukocyte receptor cluster member 1 homolog OS=Mus musculus GN=Leng1 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.4e-13
Identity = 70/253 (27.67%), Postives = 114/253 (45.06%), Query Frame = 1


Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLR---TARGLA 66
           +NILP+K W+V N +N  +V+RDE  A +EE+ +  +V     E R E LR     R   
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEAQAREEEKERERRVLLAQQEARTEFLRKKARQRNSV 60

Query: 67  PVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMK-KEEVEKRVITP 126
           P ++ + P       G ++LF   ++ +  KG   G  E   +K+R K ++E    ++T 
Sbjct: 61  PELEAADPGAP--SSGPVDLFR--ELLEERKGVPRGNKEHEEEKRREKERQEKALGILT- 120

Query: 127 EDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGEN-DGSLRVGSGNVKKGEK------- 186
                 LG   A    + PWY   P + D    G + D  ++     +K+ +K       
Sbjct: 121 -----YLGQSAAEAQTQPPWYQLPPGQKDCCPPGPSPDEKIKNRLDPLKEMQKHLAKKRH 180

Query: 187 --------------------KTLEELRAERLKREQKEKGRERALIA----ERSRKSGIAS 224
                                +LE+LRAERL+RE  E+ R  AL+A    + S++  + +
Sbjct: 181 SSESRPSREERPQKQRPREPPSLEKLRAERLQREAAERARAEALLARVQGQVSQQGQVEA 240

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BLAST of Cucsa.301860.2 vs. Swiss-Prot
Match: LENG1_BOVIN (Leukocyte receptor cluster member 1 homolog OS=Bos taurus GN=LENG1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.6e-10
Identity = 71/254 (27.95%), Postives = 109/254 (42.91%), Query Frame = 1


Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTA---RGLA 66
           +NILP+K W+V N +N  +V+RDE  A +EE+ +  +V     E R E LR     +   
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEARAREEEKERERRVLLAQQEARTEFLRKKARHQNWL 60

Query: 67  PVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKR--VIT 126
           P ++ ++        G ++LF   ++ +  K    G  E   ++KR +KE  EK   ++T
Sbjct: 61  PALEAAEAGAPG-SSGPVDLFR--ELLEEGKAVTKGNKEY-EEEKRQEKERQEKALGILT 120

Query: 127 PEDEKYKLGYGVAGKGVKMPWYLERPTK-----------------DDDTETGENDGSLRV 186
                  LG   A    + PWY   P +                 D   E  ++ G  R 
Sbjct: 121 ------YLGQSAAEAQTQPPWYQLPPRQGGPASGPGPDERIKSRLDPLREMQKHLGKKRK 180

Query: 187 GSGNVKKGEKK--------------TLEELRAERLKREQKEKGRERALIAERSRKSGIAS 225
            SG+      K              +LE+LRA+RL+RE  E+ R  AL+A   R  G A+
Sbjct: 181 HSGDSGGHSTKEKAAPEKQRPKGPPSLEQLRADRLRREAAERARAEALLA---RVGGTAA 240

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BLAST of Cucsa.301860.2 vs. Swiss-Prot
Match: LENG1_HUMAN (Leukocyte receptor cluster member 1 OS=Homo sapiens GN=LENG1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 65/249 (26.10%), Postives = 100/249 (40.16%), Query Frame = 1


Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVI 66
           +NILP+K W+V N +N  +V+RDE  A +EE+ +  +V     E R E LR        +
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEAQAREEEKERERRVLLAQQEARTEFLRKKARHQNSL 60

Query: 67  DTSKPVETDLK-PGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKR--VITPE 126
              +  E      G ++LF   ++ +  KG   G  ++  ++KR +KE  EK   ++T  
Sbjct: 61  PELEAAEAGAPGSGPVDLFR--ELLEEGKGVIRGN-KEYEEEKRQEKERQEKALGILT-- 120

Query: 127 DEKYKLGYGVAGKGVKMPWYLERPTKD-------DDTETGENDGSLRVGSGNVKKGEKKT 186
                LG   A    + PWY   P +         D +       LR    ++ K  +  
Sbjct: 121 ----YLGQSAAEAQTQPPWYQLPPGRGGPPPGPAPDEKIKSRLDPLREMQKHLGKKRQHG 180

Query: 187 LEELRAERLKREQKEKGRE--------------RALIAERSRKSGIASR-------EGDP 225
            +E    R ++E  EK R               R   AERSR   + +R       EG P
Sbjct: 181 GDEGSRSRKEKEGSEKQRPKEPPSLDQLRAERLRREAAERSRAEALLARVQGRALQEGQP 240

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BLAST of Cucsa.301860.2 vs. TrEMBL
Match: A0A0A0KKV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161970 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 4.8e-124
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 224

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BLAST of Cucsa.301860.2 vs. TrEMBL
Match: M5WAN1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011172mg PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-75
Identity = 147/215 (68.37%), Postives = 172/215 (80.00%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN++NREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRQDEEAAAKEEQLKREQSRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVE--DGSKKKRMKKEEVEKR 120
           GLAPV    KP   + KPGHINLFEGIKIFDPIKG +N G +  DG KK +  K+E + R
Sbjct: 61  GLAPVSQGEKPAAVESKPGHINLFEGIKIFDPIKGLENEGDDGKDGFKKNKKTKKEEKPR 120

Query: 121 VITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVK-KGEKKTL 180
           V+T EDEKY+LGYGVAGKGVK+PWYLER + D   ++G+ D S R   G +K K  KKTL
Sbjct: 121 VVTAEDEKYRLGYGVAGKGVKLPWYLERLSADATDDSGDGDESSRGAKGEMKNKSGKKTL 180

Query: 181 EELRAERLKREQKEKGRERALIAERSRKSGIASRE 213
           EELR ERL+RE++EK RERALI  ++RK G A ++
Sbjct: 181 EELREERLEREKREKERERALILNKTRKGGAALKD 215

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BLAST of Cucsa.301860.2 vs. TrEMBL
Match: B9SSG7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1061420 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 151/224 (67.41%), Postives = 171/224 (76.34%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQ RKRD EFRLEQLR AR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQARKRDTEFRLEQLRAAR 60

Query: 61  GLAPVIDTSKPVE-----TDLKPGHINLFEGIKIFDPIKGSDN-GGVEDGSKKKRMKKEE 120
           GLAP+    +P       ++ K  HINLFEGI+IFDPIKG +N GG E  SKKK+  KEE
Sbjct: 61  GLAPLTKPEEPAAAENDCSEPKSNHINLFEGIRIFDPIKGRENEGGSERDSKKKKKMKEE 120

Query: 121 VEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEK 180
           V  RV+T EDEKY+LGYGVAGKGVK+PWYLER   D + E  ++DGS R G    KKG K
Sbjct: 121 V--RVVTAEDEKYRLGYGVAGKGVKLPWYLERRNDDVNDEEDKDDGSTR-GKKEGKKGGK 180

Query: 181 KTLEELRAERLKREQKEKGRERALIAERSR----KSGIASREGD 215
           KTL+ELR ERLKRE++EK RERAL+ +R R    KSG  SR  D
Sbjct: 181 KTLQELREERLKREKQEKERERALLEKRERDRSLKSGGFSRRRD 221

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BLAST of Cucsa.301860.2 vs. TrEMBL
Match: A0A061GBD4_THECC (Family of Uncharacterized protein function isoform 1 OS=Theobroma cacao GN=TCM_015987 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.1e-71
Identity = 148/230 (64.35%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN+ENREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLR AR
Sbjct: 1   MGGHGGLNILPQKRWNVYNFENREKVRKDEEAAAKEEQLKREQARKRDAEFRLEQLRAAR 60

Query: 61  GLAPVI------DTSKP---VETDLKPGHINLFEGIKIFDPIKGSDNGGV--EDGSKKKR 120
           GLAP+I        S+P   VE++ K GHINLFEGIKIFDPIKG +  G   +DG K+K+
Sbjct: 61  GLAPLIKAGGAEPASEPVEVVESESKSGHINLFEGIKIFDPIKGLEKEGAAEKDGFKRKK 120

Query: 121 MKKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNV 180
           +KKEEV  + + PEDEKY+LGYGVAGKGVK+PWYLER   D   E+ END S R      
Sbjct: 121 LKKEEVAPKPVAPEDEKYRLGYGVAGKGVKLPWYLERRNVDVKEES-ENDRSERAQKDEG 180

Query: 181 KKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
           +K  KKT+EELR ERLKRE++EK RERAL  E+S+     + +    SRR
Sbjct: 181 RKTGKKTIEELREERLKRERREKERERALFIEKSKTDRSRTLKDRRFSRR 229

[Close]

BLAST of Cucsa.301860.2 vs. TrEMBL
Match: A0A0B0N472_GOSAR (Leukocyte receptor cluster member 1 OS=Gossypium arboreum GN=F383_34450 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 8.0e-71
Identity = 142/218 (65.14%), Postives = 167/218 (76.61%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQVRKRDAEFRLEQLR AR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRAAR 60

Query: 61  GLAPV------------IDTSKPVETDLKPGHINLFEGIKIFDPIK--GSDNGGVEDGSK 120
           GLAP+             +  + VE + K GHINLFEGIKIFDPIK  G +    +DG K
Sbjct: 61  GLAPLNKPGSSEPAAAATEPEEAVEPEPKSGHINLFEGIKIFDPIKSSGKEETAEKDGFK 120

Query: 121 KKRMKKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGS 180
           +K++KKEE   +V+ PEDEKY+LGYG+AGKGVK+PWYLER   D + E   NDGS RV  
Sbjct: 121 RKKLKKEEAAPKVVAPEDEKYRLGYGIAGKGVKLPWYLERRNADVE-EGSSNDGSDRVRK 180

Query: 181 GNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSR 205
              +K  KKT+EELR ERLKRE++EK RERAL+ E+++
Sbjct: 181 DEGRKTGKKTIEELREERLKRERREKERERALLIEKNK 217

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BLAST of Cucsa.301860.2 vs. TAIR10
Match: AT4G16530.1 (AT4G16530.1 Family of unknown function (DUF577))

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-48
Identity = 118/251 (47.01%), Postives = 154/251 (61.35%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKR-EQVRKRDA---------- 60
           MGGHGGLNILPQKRWNVYN++NREKV+++EEAAA+EEQ+KR E  RKRDA          
Sbjct: 552 MGGHGGLNILPQKRWNVYNFDNREKVRKEEEAAAREEQIKREE-ARKRDAESRLEVLRNV 611

Query: 61  -----------EFRLEQLRTARGLAPVIDTSKPVET----DLKPGHINLFEGIKIFDPI- 120
                      E    +       A V  T+  VE+    + K GHINLFEGI+IFDPI 
Sbjct: 612 RGLAPLKRASPEAEKGKDEAVVAAAVVKSTAVVVESVESEEPKTGHINLFEGIRIFDPIE 671

Query: 121 -KGSDNGGVEDGSKKKRMKKE----------EVEKRVITPEDEKYKLGYGVAGKGVKMPW 180
            K +D    E+  ++K+M+KE          +   R   P++EKY+LGYGVAGKGVK PW
Sbjct: 672 IKKNDKPADEEDQRRKKMRKEAAATARASAKDAAARAGDPDEEKYRLGYGVAGKGVKRPW 731

Query: 181 YLERPTKDDDTETGEND--GSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIA 212
           YLE+   ++D+  GE+D  G     +   K   KK+L+ELR ERLKRE+ EK RERAL  
Sbjct: 732 YLEKRNDENDSVRGEDDDGGCGGYEAKKKKMSGKKSLKELREERLKRERVEKERERALFM 791

[Close]

BLAST of Cucsa.301860.2 vs. TAIR10
Match: AT2G03010.1 (AT2G03010.1 Family of unknown function (DUF577))

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 1


Query: 26  VKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFE 85
           V++DEEAAA+EEQ+KRE  RKRDAE RLE LR  RGLAP+    + V       +     
Sbjct: 256 VRKDEEAAAREEQIKREDARKRDAESRLEVLRNVRGLAPLTGGREGVLEKRNDEN----- 315

Query: 86  GIKIFDPIKGSDN----GGVEDGSKK-------KRMKKEEVEK 118
                D ++G  +    GG E   KK       K +K+E VEK
Sbjct: 316 -----DSVRGEGDDGGCGGYEAKKKKMSGKKSLKELKRERVEK 348

HSP 2 Score: 47.4 bits (111), Expect = 1.4e-05
Identity = 33/110 (30.00%), Postives = 57/110 (51.82%), Query Frame = 1


Query: 102 EDGSKKKRMKKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGS 161
           E  ++++++K+E+  KR      E  +   G+A         LE+   ++D+  GE D  
Sbjct: 261 EAAAREEQIKREDARKRDAESRLEVLRNVRGLAPLTGGREGVLEKRNDENDSVRGEGDDG 320

Query: 162 LRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASR 212
              G G  +  +KK   +   + LKRE+ EK RERAL  ++S+++G  SR
Sbjct: 321 ---GCGGYEAKKKKMSGKKSLKELKRERVEKERERALFMKQSQRAGGFSR 367

[Close]

BLAST of Cucsa.301860.2 vs. NCBI nr
Match: gi|449469396|ref|XP_004152406.1| (PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 6.9e-124
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 224

[Close]

BLAST of Cucsa.301860.2 vs. NCBI nr
Match: gi|659073501|ref|XP_008437093.1| (PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-118
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEK+VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRERALIAERSRKSGIASREGD SSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDSSSRRWKSRR 223

[Close]

BLAST of Cucsa.301860.2 vs. NCBI nr
Match: gi|595848698|ref|XP_007209580.1| (hypothetical protein PRUPE_ppa011172mg [Prunus persica])

HSP 1 Score: 290.0 bits (741), Expect = 3.5e-75
Identity = 147/215 (68.37%), Postives = 172/215 (80.00%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN++NREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRQDEEAAAKEEQLKREQSRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVE--DGSKKKRMKKEEVEKR 120
           GLAPV    KP   + KPGHINLFEGIKIFDPIKG +N G +  DG KK +  K+E + R
Sbjct: 61  GLAPVSQGEKPAAVESKPGHINLFEGIKIFDPIKGLENEGDDGKDGFKKNKKTKKEEKPR 120

Query: 121 VITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVK-KGEKKTL 180
           V+T EDEKY+LGYGVAGKGVK+PWYLER + D   ++G+ D S R   G +K K  KKTL
Sbjct: 121 VVTAEDEKYRLGYGVAGKGVKLPWYLERLSADATDDSGDGDESSRGAKGEMKNKSGKKTL 180

Query: 181 EELRAERLKREQKEKGRERALIAERSRKSGIASRE 213
           EELR ERL+RE++EK RERALI  ++RK G A ++
Sbjct: 181 EELREERLEREKREKERERALILNKTRKGGAALKD 215

[Close]

BLAST of Cucsa.301860.2 vs. NCBI nr
Match: gi|645266295|ref|XP_008238550.1| (PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Prunus mume])

HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75
Identity = 146/215 (67.91%), Postives = 173/215 (80.47%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN++NREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRQDEEAAAKEEQLKREQSRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDN--GGVEDGSKKKRMKKEEVEKR 120
           GLAPV    KP   + KPGHINLFEGIKIFDPI+G +N  G  +DG KK +  K+E + R
Sbjct: 61  GLAPVSQGEKPAAVESKPGHINLFEGIKIFDPIRGLENEGGDGKDGFKKNKKMKKEEKPR 120

Query: 121 VITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVK-KGEKKTL 180
           V+T EDEKY+LGYGVAGKGVK+PWYLER + D + ++G+ D S R   G +K K  KKTL
Sbjct: 121 VVTAEDEKYRLGYGVAGKGVKLPWYLERLSADANDDSGDGDESSRGAKGEMKNKSGKKTL 180

Query: 181 EELRAERLKREQKEKGRERALIAERSRKSGIASRE 213
           EELR ERL+RE++EK RERALI  ++RK G A ++
Sbjct: 181 EELREERLEREKREKERERALILNKTRKDGAALKD 215

[Close]

BLAST of Cucsa.301860.2 vs. NCBI nr
Match: gi|1009136732|ref|XP_015885683.1| (PREDICTED: leukocyte receptor cluster member 1 homolog [Ziziphus jujuba])

HSP 1 Score: 282.3 bits (721), Expect = 7.2e-73
Identity = 150/219 (68.49%), Postives = 171/219 (78.08%), Query Frame = 1


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRD EFRLEQLR AR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQSRKRDTEFRLEQLRVAR 60

Query: 61  GLAPV---IDTSKPVETDLKP-GHINLFEGIKIFDPIKGSDNGGVEDGS------KKKRM 120
           GLAP+    D S+P E++ KP GHINLF+GIKIFDPIK  +N    DGS      K+K M
Sbjct: 61  GLAPLKKADDESEPAESEQKPDGHINLFDGIKIFDPIKALENEEFGDGSEKNKKKKQKMM 120

Query: 121 KKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLE-RPTKDDDTETGENDGSLRVG---S 180
           KKEEV+K+V+T EDEKY+LGYGVAGKG K+PWYLE RP+ DDD    +++GSL  G    
Sbjct: 121 KKEEVQKKVVTAEDEKYRLGYGVAGKGTKLPWYLEKRPSDDDDIVDAQSNGSLLTGVVQE 180

Query: 181 GNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRK 206
              KK  KKTLEELR ERLKRE+KEK RERAL+ E+  +
Sbjct: 181 NMKKKSGKKTLEELREERLKREKKEKERERALLVEKQHR 219

The following BLAST results are available for this feature:

BLAST of Cucsa.301860.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LENG1_MOUSE	8.4e-13	27.67	Leukocyte receptor cluster member 1 homolog OS=Mus musculus GN=Leng1 PE=2 SV=1	[more]
LENG1_BOVIN	6.6e-10	27.95	Leukocyte receptor cluster member 1 homolog OS=Bos taurus GN=LENG1 PE=2 SV=1	[more]
LENG1_HUMAN	2.0e-06	26.10	Leukocyte receptor cluster member 1 OS=Homo sapiens GN=LENG1 PE=1 SV=1	[more]

BLAST of Cucsa.301860.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKV3_CUCSA	4.8e-124	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161970 PE=4 SV=1	[more]
M5WAN1_PRUPE	2.4e-75	68.37	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011172mg PE=4 SV=1	[more]
B9SSG7_RICCO	1.2e-71	67.41	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1061420 PE=4 SV=1	[more]
A0A061GBD4_THECC	6.1e-71	64.35	Family of Uncharacterized protein function isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
A0A0B0N472_GOSAR	8.0e-71	65.14	Leukocyte receptor cluster member 1 OS=Gossypium arboreum GN=F383_34450 PE=4 SV=...	[more]

BLAST of Cucsa.301860.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16530.1	1.3e-48	47.01	Family of unknown function (DUF577)	[more]
AT2G03010.1	2.4e-10	41.75	Family of unknown function (DUF577)	[more]

BLAST of Cucsa.301860.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469396\|ref\|XP_004152406.1\|	6.9e-124	100.00	PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis sativus]	[more]
gi\|659073501\|ref\|XP_008437093.1\|	1.5e-118	96.88	PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo]	[more]
gi\|595848698\|ref\|XP_007209580.1\|	3.5e-75	68.37	hypothetical protein PRUPE_ppa011172mg [Prunus persica]	[more]
gi\|645266295\|ref\|XP_008238550.1\|	4.5e-75	67.91	PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Prunus mume...	[more]
gi\|1009136732\|ref\|XP_015885683.1\|	7.2e-73	68.49	PREDICTED: leukocyte receptor cluster member 1 homolog [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019339	CIR_N_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.301860	Cucsa.301860	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.301860.2	Cucsa.301860.2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301860.2.CDS.2	Cucsa.301860.2.CDS.2	CDS
Cucsa.301860.2.CDS.1	Cucsa.301860.2.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301860.2.three_prime_UTR.1	Cucsa.301860.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301860.2.five_prime_UTR.2	Cucsa.301860.2.five_prime_UTR.2	five_prime_UTR
Cucsa.301860.2.five_prime_UTR.1	Cucsa.301860.2.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	SMART	SM01083	Cir_N_3	coord: 14..50 score: 8.
None	No IPR available	unknown	Coil	Coil	coord: 170..190 score: -coord: 27..59 scor
None	No IPR available	PANTHER	PTHR31861	FAMILY NOT NAMED	coord: 1..212 score: 7.6
None	No IPR available	PANTHER	PTHR31861:SF15	F12P19.17 PROTEIN-RELATED	coord: 1..212 score: 7.6