Cucsa.301750.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.301750.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold02951 : 42733 .. 44850 (-)
Sequence length	2118

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCTGAATTCCATTTTTTTAAGTTCAGGCGGGAAACGGTAAAATCCCACCAAGGTTACGCGCCGCTGCGCTCTGGCGGTTGAAACTCACCAACGAACAACCTAAGATACCCATTTCCCATCTGTACGATTGACCAAAAATCAGCCATTGAAATGATTCACCAAACGTTTAACATCGCAATTTCTCCCCTTCTACGCAAATGCAAGTCCGTCCAGCATCTCAAACAAATTCATGCTCACCTCCTCAAGACCTACCTTTCACAAAGTCCATACGCCATTGCACCTTTACTCGAAGTCGCTGCAACTTCCGGCTGTGATCGCGATTCTTTCTTCTCTTACGCTTGTGGAATTTTCAAGAACCTGCAGCAGAGGAACATTTTCATGTATAATTCAATGATCAGAGGGTATTTTCTATCGCGTTTTCCGAAACAAGCGATTTTGTGTTACTTAGATTTGATGGATCGTGGATTTCTTGCCAATAAATATACTTTCCCGCCATTGATAAAGGCTTGCGCGTTAGTTTATCGTGAGCTGAAGCGAATAGGTTATTTGGTTCATGCCCATGTTATTGTACTTGGATATGAGAATGATGCTTTTGTCGTTAGTGCTCTTGTTGAATTTTATTCCTTGTTTGATTTGAAAGTTGCACGCGTATTGTTTGACAAAAGTTCTGGGAAGGATGTAGTTGTGTGGACGGTGATGGTTGATGGGTATGGAAAGGTTGGGGATATTGAGAGTGCTAGAGTGTTGTTTGATGAAATGCCCGAGAGGAATGTAATTTCTTGGAGTGCTATGATGGCTGCTTATTCTCGGGTTAGTGACTTCAGAGAGGTGCTTTGTTTGTTTAGACAAATGCAAAAAAAGAATATTGTGCCTAATGATTCAGTTATTGTTAGTGTTCTTACTGCTTGTGCACATCTTGGTGCTATAACACAAGGACTTTGGATGCACTCTTATGCCAAGCGCTACGGTTTGGACTCAAACCCAATATTGGCTACTGCATTGGTTGACATGTATTCAAAATGTGGTTACATCGAATCAGCTTTAGAAGTTTTTGAGGGCATTTCAAACAAAGATGCTGGGGCTTGGAATGCAATGATTTCTGGTTTTGCAATGACTGGGAATGTGGTGAAATCACTTGAGTTATTTGATAAAATGATTGCCAGTGGAACTCAGGCTACAGAAGCTACATTTGTCTCTATCCTTGCTGCTTGTACACACGCCAAGATGGTTGAGAGAGGCCTTGAATTCTTTGACCAAATGTATCCTGTTTACAGGGTTCAACCTCAATTCGAGCATTATGCTTGTGTGGTTGATCTTATGGCTAGAGCAGGTATGGTAGAGGATGCTGAGAAATTCGTGGAGGAAAAAATGGGAGGCTTTAGTAATGTGGATGCCAATGTGTGGGGAGCAATACTGAGTGCTTGTAGACAATATAGGAATATTGAAATTGGGGACAGAATTTGGACAAAACTTTCAGCCTTGGGTTTATTAGACGGTGGTACCCAAGTTCTTTCATACAACATCTTTTCTGAAGCTGGAAGGGAAATGGCGGCAAAGGAGGTAAGAAAAAAATTCTCAGAAGCTAGATCGAAAAAAATACCAGGTTGCAGCGTGATAGTGGTTGATGGCGCAGTTCAAGAGTTTCTTGCGGGCGATCTCTCTCATCCACAAGTGCAACATATATGTGAAATGCTTGGTTTTCTTTCTAAAATGGTGAAGTGGGAAACGGTCAAGTAATTTAGAAATGGTTTTCTGTTTGAGGATCTACATTCAAAATATCGAGGGACATCATGAGGCCTATATCTAGACACTGAGTTTAAAAACTAAGATTTTATCCCAAAATAGTGAATCCAAAAAAATCACTACATTTGAGGATCTAACTTTGAAAAAAAATAAAAATATCTCACAATGTTTATAAAATTGATGAAATACTTCTCTCATTGTCAATTTGGTTTGAGTTGAAACCAACGTCATCTAATATTTTCAAATAGGAGAAATCATTCTTTTAGAATCTGTGCATTTCATTTGGTTTTATCATTTTTCTGTAAATTCAGAGGCTGCGTGTTATCTCTCAACAAAGTTCACATAATTCCAAGTGTGCCATTGTTTGGTAAAA

mRNA sequence

AGTCTGAATTCCATTTTTTTAAGTTCAGGCGGGAAACGGTAAAATCCCACCAAGGTTACGCGCCGCTGCGCTCTGGCGGTTGAAACTCACCAACGAACAACCTAAGATACCCATTTCCCATCTGTACGATTGACCAAAAATCAGCCATTGAAATGATTCACCAAACGTTTAACATCGCAATTTCTCCCCTTCTACGCAAATGCAAGTCCGTCCAGCATCTCAAACAAATTCATGCTCACCTCCTCAAGACCTACCTTTCACAAAGTCCATACGCCATTGCACCTTTACTCGAAGTCGCTGCAACTTCCGGCTGTGATCGCGATTCTTTCTTCTCTTACGCTTGTGGAATTTTCAAGAACCTGCAGCAGAGGAACATTTTCATGTATAATTCAATGATCAGAGGGTATTTTCTATCGCGTTTTCCGAAACAAGCGATTTTGTGTTACTTAGATTTGATGGATCGTGGATTTCTTGCCAATAAATATACTTTCCCGCCATTGATAAAGGCTTGCGCGTTAGTTTATCGTGAGCTGAAGCGAATAGGTTATTTGGTTCATGCCCATGTTATTGTACTTGGATATGAGAATGATGCTTTTGTCGTTAGTGCTCTTGTTGAATTTTATTCCTTGTTTGATTTGAAAGTTGCACGCGTATTGTTTGACAAAAGTTCTGGGAAGGATGTAGTTGTGTGGACGGTGATGGTTGATGGGTATGGAAAGGTTGGGGATATTGAGAGTGCTAGAGTGTTGTTTGATGAAATGCCCGAGAGGAATGTAATTTCTTGGAGTGCTATGATGGCTGCTTATTCTCGGGTTAGTGACTTCAGAGAGGTGCTTTGTTTGTTTAGACAAATGCAAAAAAAGAATATTGTGCCTAATGATTCAGTTATTGTTAGTGTTCTTACTGCTTGTGCACATCTTGGTGCTATAACACAAGGACTTTGGATGCACTCTTATGCCAAGCGCTACGGTTTGGACTCAAACCCAATATTGGCTACTGCATTGGTTGACATGTATTCAAAATGTGGTTACATCGAATCAGCTTTAGAAGTTTTTGAGGGCATTTCAAACAAAGATGCTGGGGCTTGGAATGCAATGATTTCTGGTTTTGCAATGACTGGGAATGTGGTGAAATCACTTGAGTTATTTGATAAAATGATTGCCAGTGGAACTCAGGCTACAGAAGCTACATTTGTCTCTATCCTTGCTGCTTGTACACACGCCAAGATGGTTGAGAGAGGCCTTGAATTCTTTGACCAAATGTATCCTGTTTACAGGGTTCAACCTCAATTCGAGCATTATGCTTGTGTGGTTGATCTTATGGCTAGAGCAGGTATGGTAGAGGATGCTGAGAAATTCGTGGAGGAAAAAATGGGAGGCTTTAGTAATGTGGATGCCAATGTGTGGGGAGCAATACTGAGTGCTTGTAGACAATATAGGAATATTGAAATTGGGGACAGAATTTGGACAAAACTTTCAGCCTTGGGTTTATTAGACGGTGGTACCCAAGTTCTTTCATACAACATCTTTTCTGAAGCTGGAAGGGAAATGGCGGCAAAGGAGGTAAGAAAAAAATTCTCAGAAGCTAGATCGAAAAAAATACCAGGTTGCAGCGTGATAGTGGTTGATGGCGCAGTTCAAGAGTTTCTTGCGGGCGATCTCTCTCATCCACAAGTGCAACATATATGTGAAATGCTTGGTTTTCTTTCTAAAATGGTGAAGTGGGAAACGGTCAAGTAATTTAGAAATGGTTTTCTGTTTGAGGATCTACATTCAAAATATCGAGGGACATCATGAGGCCTATATCTAGACACTGAGTTTAAAAACTAAGATTTTATCCCAAAATAGTGAATCCAAAAAAATCACTACATTTGAGGATCTAACTTTGAAAAAAAATAAAAATATCTCACAATGTTTATAAAATTGATGAAATACTTCTCTCATTGTCAATTTGGTTTGAGTTGAAACCAACGTCATCTAATATTTTCAAATAGGAGAAATCATTCTTTTAGAATCTGTGCATTTCATTTGGTTTTATCATTTTTCTGTAAATTCAGAGGCTGCGTGTTATCTCTCAACAAAGTTCACATAATTCCAAGTGTGCCATTGTTTGGTAAAA

Coding sequence (CDS)

ATGATTCACCAAACGTTTAACATCGCAATTTCTCCCCTTCTACGCAAATGCAAGTCCGTCCAGCATCTCAAACAAATTCATGCTCACCTCCTCAAGACCTACCTTTCACAAAGTCCATACGCCATTGCACCTTTACTCGAAGTCGCTGCAACTTCCGGCTGTGATCGCGATTCTTTCTTCTCTTACGCTTGTGGAATTTTCAAGAACCTGCAGCAGAGGAACATTTTCATGTATAATTCAATGATCAGAGGGTATTTTCTATCGCGTTTTCCGAAACAAGCGATTTTGTGTTACTTAGATTTGATGGATCGTGGATTTCTTGCCAATAAATATACTTTCCCGCCATTGATAAAGGCTTGCGCGTTAGTTTATCGTGAGCTGAAGCGAATAGGTTATTTGGTTCATGCCCATGTTATTGTACTTGGATATGAGAATGATGCTTTTGTCGTTAGTGCTCTTGTTGAATTTTATTCCTTGTTTGATTTGAAAGTTGCACGCGTATTGTTTGACAAAAGTTCTGGGAAGGATGTAGTTGTGTGGACGGTGATGGTTGATGGGTATGGAAAGGTTGGGGATATTGAGAGTGCTAGAGTGTTGTTTGATGAAATGCCCGAGAGGAATGTAATTTCTTGGAGTGCTATGATGGCTGCTTATTCTCGGGTTAGTGACTTCAGAGAGGTGCTTTGTTTGTTTAGACAAATGCAAAAAAAGAATATTGTGCCTAATGATTCAGTTATTGTTAGTGTTCTTACTGCTTGTGCACATCTTGGTGCTATAACACAAGGACTTTGGATGCACTCTTATGCCAAGCGCTACGGTTTGGACTCAAACCCAATATTGGCTACTGCATTGGTTGACATGTATTCAAAATGTGGTTACATCGAATCAGCTTTAGAAGTTTTTGAGGGCATTTCAAACAAAGATGCTGGGGCTTGGAATGCAATGATTTCTGGTTTTGCAATGACTGGGAATGTGGTGAAATCACTTGAGTTATTTGATAAAATGATTGCCAGTGGAACTCAGGCTACAGAAGCTACATTTGTCTCTATCCTTGCTGCTTGTACACACGCCAAGATGGTTGAGAGAGGCCTTGAATTCTTTGACCAAATGTATCCTGTTTACAGGGTTCAACCTCAATTCGAGCATTATGCTTGTGTGGTTGATCTTATGGCTAGAGCAGGTATGGTAGAGGATGCTGAGAAATTCGTGGAGGAAAAAATGGGAGGCTTTAGTAATGTGGATGCCAATGTGTGGGGAGCAATACTGAGTGCTTGTAGACAATATAGGAATATTGAAATTGGGGACAGAATTTGGACAAAACTTTCAGCCTTGGGTTTATTAGACGGTGGTACCCAAGTTCTTTCATACAACATCTTTTCTGAAGCTGGAAGGGAAATGGCGGCAAAGGAGGTAAGAAAAAAATTCTCAGAAGCTAGATCGAAAAAAATACCAGGTTGCAGCGTGATAGTGGTTGATGGCGCAGTTCAAGAGTTTCTTGCGGGCGATCTCTCTCATCCACAAGTGCAACATATATGTGAAATGCTTGGTTTTCTTTCTAAAATGGTGAAGTGGGAAACGGTCAAGTAA

Protein sequence

MIHQTFNIAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK*

Homology

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BLAST of Cucsa.301750.1 vs. Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-97
Identity = 190/501 (37.92%), Postives = 294/501 (58.68%), Query Frame = 1


Query: 14  LRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQR 73
           L++C   + LKQIHA +LKT L Q  YAI   L    +S      F  YA  +F    + 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISS--TSSDFLPYAQIVFDGFDRP 80

Query: 74  NIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALV--YRELKRIG 133
           + F++N MIRG+  S  P++++L Y  ++      N YTFP L+KAC+ +  + E  +I 
Sbjct: 81  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI- 140

Query: 134 YLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGYGKV 193
              HA +  LGYEND + V++L+  Y++  + K+A +LFD+    D V W  ++ GY K 
Sbjct: 141 ---HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 200

Query: 194 GDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVL 253
           G ++ A  LF +M E+N ISW+ M++ Y +    +E L LF +MQ  ++ P++  + + L
Sbjct: 201 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 260

Query: 254 TACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAG 313
           +ACA LGA+ QG W+HSY  +  +  + +L   L+DMY+KCG +E ALEVF+ I  K   
Sbjct: 261 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 320

Query: 314 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 373
           AW A+ISG+A  G+  +++  F +M   G +    TF ++L AC++  +VE G   F  M
Sbjct: 321 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 380

Query: 374 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 433
              Y ++P  EHY C+VDL+ RAG++++A++F++E        +A +WGA+L ACR ++N
Sbjct: 381 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKACRIHKN 440

Query: 434 IEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIV 493
           IE+G+ I   L A+    GG  V   NI +   +   A E R+   E    K+PGCS I 
Sbjct: 441 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 500

Query: 494 VDGAVQEFLAGDLSHPQVQHI 512
           ++G   EFLAGD SHP+++ I
Sbjct: 501 LEGTTHEFLAGDRSHPEIEKI 512

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BLAST of Cucsa.301750.1 vs. Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.0e-93
Identity = 190/533 (35.65%), Postives = 312/533 (58.54%), Query Frame = 1


Query: 9   AISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFK 68
           ++ P +  C++++ L QIHA  +K+   +   A A +L   ATS         YA  IF 
Sbjct: 25  SLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDL-DYAHKIFN 84

Query: 69  NLQQRNIFMYNSMIRGYFLSRFPKQ--AILCYLDLMDRGFLA-NKYTFPPLIKACALVYR 128
            + QRN F +N++IRG+  S   K   AI  + ++M   F+  N++TFP ++KACA   +
Sbjct: 85  QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 144

Query: 129 ELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKS------------ 188
             +  G  +H   +  G+  D FV+S LV  Y +   +K ARVLF K+            
Sbjct: 145 IQE--GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 204

Query: 189 --SGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCL 248
                ++V+W VM+DGY ++GD ++AR+LFD+M +R+V+SW+ M++ YS    F++ + +
Sbjct: 205 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 264

Query: 249 FRQMQKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSK 308
           FR+M+K +I PN   +VSVL A + LG++  G W+H YA+  G+  + +L +AL+DMYSK
Sbjct: 265 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 324

Query: 309 CGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSI 368
           CG IE A+ VFE +  ++   W+AMI+GFA+ G    +++ F KM  +G + ++  ++++
Sbjct: 325 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 384

Query: 369 LAACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGF 428
           L AC+H  +VE G  +F QM  V  ++P+ EHY C+VDL+ R+G++++AE+F+   +   
Sbjct: 385 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI---LNMP 444

Query: 429 SNVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 488
              D  +W A+L ACR   N+E+G R+   L  +   D G  V   N+++  G      E
Sbjct: 445 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 504

Query: 489 VRKKFSEARSKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVK 524
           +R +  E   +K PGCS+I +DG + EF+  D SHP+ + I  ML  +S  ++
Sbjct: 505 MRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551

[Close]

BLAST of Cucsa.301750.1 vs. Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.7e-88
Identity = 182/508 (35.83%), Postives = 295/508 (58.07%), Query Frame = 1


Query: 13  LLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFS-------YACG 72
           LL+ C S   LK IH  LL+T+L    +  + LL +     C  DS F+       YA G
Sbjct: 18  LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLAL-----CVDDSTFNKPTNLLGYAYG 77

Query: 73  IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYR 132
           IF  +Q  N+F++N +IR +     P +A   Y  ++      +  TFP LIKA + +  
Sbjct: 78  IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM-- 137

Query: 133 ELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGKDVVVWTVMV 192
           E   +G   H+ ++  G++ND +V ++LV  Y+    +  A  +F +   +DVV WT MV
Sbjct: 138 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 197

Query: 193 DGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDS 252
            GY K G +E+AR +FDEMP RN+ +WS M+  Y++ + F + + LF  M+++ +V N++
Sbjct: 198 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 257

Query: 253 VIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGI 312
           V+VSV+++CAHLGA+  G   + Y  +  +  N IL TALVDM+ +CG IE A+ VFEG+
Sbjct: 258 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 317

Query: 313 SNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGL 372
              D+ +W+++I G A+ G+  K++  F +MI+ G    + TF ++L+AC+H  +VE+GL
Sbjct: 318 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 377

Query: 373 EFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSA 432
           E ++ M   + ++P+ EHY C+VD++ RAG + +AE F+   +      +A + GA+L A
Sbjct: 378 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI---LKMHVKPNAPILGALLGA 437

Query: 433 CRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIP 492
           C+ Y+N E+ +R+   L  +     G  VL  NI++ AG+    + +R    E   KK P
Sbjct: 438 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 497

Query: 493 GCSVIVVDGAVQEFLAG-DLSHPQVQHI 512
           G S+I +DG + +F  G D  HP++  I
Sbjct: 498 GWSLIEIDGKINKFTMGDDQKHPEMGKI 515

[Close]

BLAST of Cucsa.301750.1 vs. Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.9e-84
Identity = 172/515 (33.40%), Postives = 295/515 (57.28%), Query Frame = 1


Query: 13  LLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQ 72
           +LR CK++ H+  IHA +++T+  Q  + +  L+ V +T     DS   YA  +F  +  
Sbjct: 35  VLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTL----DSV-DYAYDVFSYVSN 94

Query: 73  RNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACAL-VYRELKRIG 132
            N+++Y +MI G+  S      +  Y  ++    L + Y    ++KAC L V RE     
Sbjct: 95  PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE----- 154

Query: 133 YLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGYGKV 192
             +HA V+ LG+ +   V   ++E Y    +L  A+ +FD+   +D V  TVM++ Y + 
Sbjct: 155 --IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 214

Query: 193 GDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVL 252
           G I+ A  LF ++  ++ + W+AM+    R  +  + L LFR+MQ +N+  N+   V VL
Sbjct: 215 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 274

Query: 253 TACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAG 312
           +AC+ LGA+  G W+HS+ +   ++ +  +  AL++MYS+CG I  A  VF  + +KD  
Sbjct: 275 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 334

Query: 313 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 372
           ++N MISG AM G  V+++  F  M+  G +  + T V++L AC+H  +++ GLE F+ M
Sbjct: 335 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 394

Query: 373 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 432
             V+ V+PQ EHY C+VDL+ R G +E+A +F+E         D  + G +LSAC+ + N
Sbjct: 395 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLSACKIHGN 454

Query: 433 IEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIV 492
           +E+G++I  +L      D GT VL  N+++ +G+   + E+R+   ++  +K PGCS I 
Sbjct: 455 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 514

Query: 493 VDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWE 526
           VD  + EFL GD++HP  + I + L  L+++++++
Sbjct: 515 VDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFK 534

[Close]

BLAST of Cucsa.301750.1 vs. Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.6e-83
Identity = 168/497 (33.80%), Postives = 281/497 (56.54%), Query Frame = 1


Query: 12  PLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQ 71
           P L++ KS    K+I+A ++   LSQS + +  +++      CD+     YA  +F  + 
Sbjct: 15  PFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDF-----CDKIEDMDYATRLFNQVS 74

Query: 72  QRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGF-LANKYTFPPLIKACALVYRELKRI 131
             N+F+YNS+IR Y  +      I  Y  L+ + F L +++TFP + K+CA +      +
Sbjct: 75  NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY--L 134

Query: 132 GYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGKDVVVWTVMVDGYGK 191
           G  VH H+   G        +AL++ Y  FD L  A  +FD+   +DV+ W  ++ GY +
Sbjct: 135 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 194

Query: 192 VGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSV 251
           +G ++ A+ LF  M ++ ++SW+AM++ Y+ +  + E +  FR+MQ   I P++  ++SV
Sbjct: 195 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 254

Query: 252 LTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDA 311
           L +CA LG++  G W+H YA+R G      +  AL++MYSKCG I  A+++F  +  KD 
Sbjct: 255 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 314

Query: 312 GAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQ 371
            +W+ MISG+A  GN   ++E F++M  +  +    TF+ +L+AC+H  M + GL +FD 
Sbjct: 315 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 374

Query: 372 MYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYR 431
           M   Y+++P+ EHY C++D++ARAG +E A +  +         D+ +WG++LS+CR   
Sbjct: 375 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKIWGSLLSSCRTPG 434

Query: 432 NIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVI 491
           N+++       L  L   D G  VL  NI+++ G+      +RK       KK PG S+I
Sbjct: 435 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 494

Query: 492 VVDGAVQEFLAGDLSHP 507
            V+  VQEF++GD S P
Sbjct: 495 EVNNIVQEFVSGDNSKP 501

[Close]

BLAST of Cucsa.301750.1 vs. TrEMBL
Match: A0A0A0KMY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162080 PE=4 SV=1)

HSP 1 Score: 1051.2 bits (2717), Expect = 4.2e-304
Identity = 526/528 (99.62%), Postives = 526/528 (99.62%), Query Frame = 1


Query: 1   MIHQTFNIAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN AISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF
Sbjct: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC
Sbjct: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVI SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480
           ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480

Query: 481 KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK 529
           KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK
Sbjct: 481 KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK 528

[Close]

BLAST of Cucsa.301750.1 vs. TrEMBL
Match: M5W1U7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021060mg PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 5.3e-182
Identity = 324/516 (62.79%), Postives = 393/516 (76.16%), Query Frame = 1


Query: 13  LLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQ 72
           L +KCK++  LKQI+AHLL   L ++PY+IAPLL  +ATS     S F YAC IFK+   
Sbjct: 40  LSQKCKTLNQLKQIYAHLLTCRLPENPYSIAPLLSASATS--KDASLFCYACSIFKHHHH 99

Query: 73  RNIFMYNSMIRGYFL-SRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKRIG 132
           RN FMYN+MIRGY L S  P  AILCYLD+++ GF+ N YTFPPLIKAC ++    K  G
Sbjct: 100 RNTFMYNTMIRGYVLQSHTPIPAILCYLDMLNYGFVPNNYTFPPLIKACTVLIPNSKLSG 159

Query: 133 YLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGYGKV 192
            LVH HV+  GY +D FV+S+L+EFYS+  D++ A+++FDKS  +DVVVWT M+DGYGK 
Sbjct: 160 RLVHGHVVKFGYRDDPFVLSSLIEFYSVIHDMETAKLVFDKSPKRDVVVWTAMIDGYGKA 219

Query: 193 GDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVL 252
           GD+E+AR LFDEMPERN ISWSAMMAAYSRVS FREVL LFRQMQ+    PN+SV+VSVL
Sbjct: 220 GDVENARALFDEMPERNAISWSAMMAAYSRVSHFREVLSLFRQMQEVGTKPNESVLVSVL 279

Query: 253 TACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAG 312
           TA AHLGA+TQGLW+HS+AKRY L+SN ILATALVDMYSKCGY+E+AL VFEGISNKDA 
Sbjct: 280 TASAHLGAVTQGLWVHSFAKRYNLESNTILATALVDMYSKCGYVEAALWVFEGISNKDAR 339

Query: 313 AWNAMISGFAMTGNVVKSLELFDKMIA-SGTQATEATFVSILAACTHAKMVERGLEFFDQ 372
           AWNAMI+G AM G+  KSLELF+KM+   G Q TE TFV++L ACTHAKMV++GLE FDQ
Sbjct: 340 AWNAMIAGVAMNGDARKSLELFNKMVEYGGVQPTETTFVAVLTACTHAKMVDKGLELFDQ 399

Query: 373 MYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYR 432
           M  +Y V+P  EHY CVVDL+ARAG+VE+AEKF E KMGG    D NVWGA+L+ACR + 
Sbjct: 400 MGNLYGVKPGLEHYGCVVDLLARAGLVEEAEKFTEVKMGGLRRGDVNVWGALLAACRVHG 459

Query: 433 NIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVI 492
           N+E+GDRIW KL+ +G+ D G  VLSYN++  AG E+ A  VR   SEA  KK PG SVI
Sbjct: 460 NVEVGDRIWKKLAEMGVADCGIHVLSYNMYKAAGMELEANRVRNMISEAGMKKKPGSSVI 519

Query: 493 VVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWE 526
            ++G  +EFL GD+ HPQ + I  ML  L KMV  E
Sbjct: 520 ELNGVAEEFLIGDVCHPQAEEIVNMLDSLCKMVNLE 553

[Close]

BLAST of Cucsa.301750.1 vs. TrEMBL
Match: A0A067KJF2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13320 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 7.7e-181
Identity = 317/518 (61.20%), Postives = 398/518 (76.83%), Query Frame = 1


Query: 9   AISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFK 68
           +++ L +KCK++  LKQ+HAHLLKT L ++P+AI  LL VAATS     SFFSYA  IF 
Sbjct: 14  SLTALSQKCKTLSQLKQLHAHLLKTLLPENPFAIGTLLSVAATS--KDASFFSYARLIFN 73

Query: 69  NLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELK 128
           ++   N FMYNSMIRGY  +  PK AILCYLD++  G   N YTFPPLIKAC+++    K
Sbjct: 74  HICLHNTFMYNSMIRGYVQTNLPKPAILCYLDMLSYGLEVNNYTFPPLIKACSILAPSGK 133

Query: 129 RIGYLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGY 188
            +G+LVH H + LG+ +D FVVSAL+EFYSL  D+  A ++FD+S  +DVV+WT M+DGY
Sbjct: 134 VMGFLVHVHALKLGFSDDPFVVSALIEFYSLVQDMGTASMVFDRSPKRDVVMWTGMIDGY 193

Query: 189 GKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIV 248
           GK+GD E AR LF++MP RNVISWSA+MAAYSR SDF EVLCLFR+MQ+  + PN+SV+V
Sbjct: 194 GKIGDTEKARDLFEKMPVRNVISWSAIMAAYSRASDFNEVLCLFRRMQEAGLEPNESVLV 253

Query: 249 SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNK 308
           SVLTACAHLGAITQGLW+HSYAKR+ LD NPILATALVDMYSKCG+++SAL VF+GI +K
Sbjct: 254 SVLTACAHLGAITQGLWVHSYAKRFNLDVNPILATALVDMYSKCGHVDSALSVFKGIVSK 313

Query: 309 DAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFF 368
           DA AWNAMISG AM G+  KSLELF  MI+SG Q TE TFV+IL+AC+H  MV  GL  F
Sbjct: 314 DAQAWNAMISGVAMNGDAKKSLELFYDMISSGVQPTETTFVAILSACSHGMMVNEGLILF 373

Query: 369 DQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQ 428
           +QM  VY ++P+FEHYAC+VDL+AR+GMVE+AEKFV++KMGG    DANVWGA+LSACR 
Sbjct: 374 EQMSSVYGIEPKFEHYACIVDLLARSGMVEEAEKFVDKKMGGLEGKDANVWGALLSACRI 433

Query: 429 YRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCS 488
           Y N+E+G+R+W KL+ +  LD G+Q+LSYNI+ EAG  + A  V K  SEA  KK P CS
Sbjct: 434 YGNVEVGNRVWKKLADMQTLDSGSQLLSYNIYKEAGWVLEANRVGKLISEAGMKKQPSCS 493

Query: 489 VIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWE 526
           VI ++G V+EFL GD++HP+     + L  L K+V  E
Sbjct: 494 VIELNGVVEEFLVGDVAHPRASEAYKTLNSLFKLVNME 529

[Close]

BLAST of Cucsa.301750.1 vs. TrEMBL
Match: A5AXT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026273 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 1.3e-175
Identity = 301/451 (66.74%), Postives = 360/451 (79.82%), Query Frame = 1


Query: 69  NLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELK 128
           NL  RNIFMYNSMIRGY LS  P +AILCYLD+++ G LAN YTFPPLIKAC  +    K
Sbjct: 343 NLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSK 402

Query: 129 RIGYLVHAHVIVLGYENDAFVVSALVEFYSL-FDLKVARVLFDKSSGKDVVVWTVMVDGY 188
            IG LVHAHV+  G++ D FVVSAL+EFYSL FD+  AR LFD+   +DVV+WT M+DGY
Sbjct: 403 LIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGY 462

Query: 189 GKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIV 248
           GK+GD+E AR+LF++MPERN ISWSA+MAAYSRV DF+EVLCLFR+MQ+   +PN+SV+V
Sbjct: 463 GKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLV 522

Query: 249 SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNK 308
           SVLTACAHLGA+ QGLW+HSYAK+   DSNPILATALVDMYSKCG +ESAL  F+GI NK
Sbjct: 523 SVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNK 582

Query: 309 DAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFF 368
           DAGAWNAMISG AM G+  KSLELF+KMI++GTQ TE TFV++L ACTHA++V  GL+ F
Sbjct: 583 DAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLF 642

Query: 369 DQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQ 428
           +QM   Y V+PQ EHYAC+VDLMARAGM+ +AEKF+EEKMGG    DANVWGA L ACR 
Sbjct: 643 EQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRT 702

Query: 429 YRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCS 488
           Y NIE+G+R+W KL+ +G+ D GT VLSYN++ EAG +M AK VR+  SE   KK PGCS
Sbjct: 703 YGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKKPGCS 762

Query: 489 VIVVDGAVQEFLAGDLSHPQVQHICEMLGFL 519
           +I VDG V+EFLAGDLSH Q   IC+ L  L
Sbjct: 763 IIEVDGTVEEFLAGDLSHSQAPQICKTLDSL 793

[Close]

BLAST of Cucsa.301750.1 vs. TrEMBL
Match: A0A072TJ84_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_0011s0300 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 1.7e-175
Identity = 310/523 (59.27%), Postives = 393/523 (75.14%), Query Frame = 1


Query: 10  ISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKN 69
           ++ L + C S+  LKQ+HAH+L+ ++  SPYA+AP+L VAATS  +  SFF YA  IF N
Sbjct: 7   LTTLAQNCNSLTQLKQLHAHILRCHIQHSPYALAPILSVAATS--NYTSFFLYARSIFHN 66

Query: 70  L--QQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC-ALVYRE 129
           L  + RN F++N+MIR Y  +  P  A+ CY  ++  G   N YTFPPLIK+C AL+   
Sbjct: 67  LTHRNRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIAAS 126

Query: 130 LK-----RIGYLVHAHVIVLGYENDAFVVSALVEFYS-LFDLKVARVLFDKSSGKDVVVW 189
            K      IG LVH HV++ G  NDA+VVS  +EFYS L +L+ ARVLFD++  KDVV+W
Sbjct: 127 SKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLW 186

Query: 190 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 249
           T M+DGYGK+GD+ESAR +FDEMPERNV+SWSAMMAAYSRVS+FREVL LF +MQ + + 
Sbjct: 187 TAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVR 246

Query: 250 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYG-LDSNPILATALVDMYSKCGYIESALE 309
           PNDSV+V+VLTACAHLGA+TQG+W+HSYA+R+  + SNPILATALVDMYSKCG +ESAL 
Sbjct: 247 PNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALS 306

Query: 310 VFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKM 369
           VF+GIS+KD GAWNAMISG A+ G+  KSLELF +MI  G +  E TFV++L ACTHA+M
Sbjct: 307 VFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARM 366

Query: 370 VERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWG 429
           V  GL  F++M   Y V+P  EHYACVVDL++R+GMVE+AE+F+EEKMGGF+  DANVWG
Sbjct: 367 VREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWG 426

Query: 430 AILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEAR 489
           AIL+ACR Y+NI +G+R+W KL  +G+ D GT VL+YNI+ EAG +  A  VR   SEA 
Sbjct: 427 AILNACRIYKNINVGNRVWKKLIDMGVADCGTHVLTYNIYREAGWDAEANRVRSMISEAG 486

Query: 490 SKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMV 523
            KK PGCS+I V   V+EFLAGD SHPQ Q +C +L  + K V
Sbjct: 487 MKKKPGCSIIEVGNEVEEFLAGDQSHPQAQEMCRLLDSILKTV 527

[Close]

BLAST of Cucsa.301750.1 vs. TAIR10
Match: AT5G66520.1 (AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 358.6 bits (919), Expect = 6.6e-99
Identity = 190/501 (37.92%), Postives = 294/501 (58.68%), Query Frame = 1


Query: 14  LRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQR 73
           L++C   + LKQIHA +LKT L Q  YAI   L    +S      F  YA  +F    + 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISS--TSSDFLPYAQIVFDGFDRP 80

Query: 74  NIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALV--YRELKRIG 133
           + F++N MIRG+  S  P++++L Y  ++      N YTFP L+KAC+ +  + E  +I 
Sbjct: 81  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI- 140

Query: 134 YLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGYGKV 193
              HA +  LGYEND + V++L+  Y++  + K+A +LFD+    D V W  ++ GY K 
Sbjct: 141 ---HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 200

Query: 194 GDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVL 253
           G ++ A  LF +M E+N ISW+ M++ Y +    +E L LF +MQ  ++ P++  + + L
Sbjct: 201 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 260

Query: 254 TACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAG 313
           +ACA LGA+ QG W+HSY  +  +  + +L   L+DMY+KCG +E ALEVF+ I  K   
Sbjct: 261 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 320

Query: 314 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 373
           AW A+ISG+A  G+  +++  F +M   G +    TF ++L AC++  +VE G   F  M
Sbjct: 321 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 380

Query: 374 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 433
              Y ++P  EHY C+VDL+ RAG++++A++F++E        +A +WGA+L ACR ++N
Sbjct: 381 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKACRIHKN 440

Query: 434 IEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIV 493
           IE+G+ I   L A+    GG  V   NI +   +   A E R+   E    K+PGCS I 
Sbjct: 441 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 500

Query: 494 VDGAVQEFLAGDLSHPQVQHI 512
           ++G   EFLAGD SHP+++ I
Sbjct: 501 LEGTTHEFLAGDRSHPEIEKI 512

[Close]

BLAST of Cucsa.301750.1 vs. TAIR10
Match: AT5G48910.1 (AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 345.5 bits (885), Expect = 5.8e-95
Identity = 190/533 (35.65%), Postives = 312/533 (58.54%), Query Frame = 1


Query: 9   AISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFK 68
           ++ P +  C++++ L QIHA  +K+   +   A A +L   ATS         YA  IF 
Sbjct: 25  SLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDL-DYAHKIFN 84

Query: 69  NLQQRNIFMYNSMIRGYFLSRFPKQ--AILCYLDLMDRGFLA-NKYTFPPLIKACALVYR 128
            + QRN F +N++IRG+  S   K   AI  + ++M   F+  N++TFP ++KACA   +
Sbjct: 85  QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 144

Query: 129 ELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKS------------ 188
             +  G  +H   +  G+  D FV+S LV  Y +   +K ARVLF K+            
Sbjct: 145 IQE--GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 204

Query: 189 --SGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCL 248
                ++V+W VM+DGY ++GD ++AR+LFD+M +R+V+SW+ M++ YS    F++ + +
Sbjct: 205 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 264

Query: 249 FRQMQKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSK 308
           FR+M+K +I PN   +VSVL A + LG++  G W+H YA+  G+  + +L +AL+DMYSK
Sbjct: 265 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 324

Query: 309 CGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSI 368
           CG IE A+ VFE +  ++   W+AMI+GFA+ G    +++ F KM  +G + ++  ++++
Sbjct: 325 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 384

Query: 369 LAACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGF 428
           L AC+H  +VE G  +F QM  V  ++P+ EHY C+VDL+ R+G++++AE+F+   +   
Sbjct: 385 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI---LNMP 444

Query: 429 SNVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 488
              D  +W A+L ACR   N+E+G R+   L  +   D G  V   N+++  G      E
Sbjct: 445 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 504

Query: 489 VRKKFSEARSKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVK 524
           +R +  E   +K PGCS+I +DG + EF+  D SHP+ + I  ML  +S  ++
Sbjct: 505 MRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551

[Close]

BLAST of Cucsa.301750.1 vs. TAIR10
Match: AT5G06540.1 (AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 328.2 bits (840), Expect = 9.5e-90
Identity = 182/508 (35.83%), Postives = 295/508 (58.07%), Query Frame = 1


Query: 13  LLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFS-------YACG 72
           LL+ C S   LK IH  LL+T+L    +  + LL +     C  DS F+       YA G
Sbjct: 18  LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLAL-----CVDDSTFNKPTNLLGYAYG 77

Query: 73  IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYR 132
           IF  +Q  N+F++N +IR +     P +A   Y  ++      +  TFP LIKA + +  
Sbjct: 78  IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM-- 137

Query: 133 ELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGKDVVVWTVMV 192
           E   +G   H+ ++  G++ND +V ++LV  Y+    +  A  +F +   +DVV WT MV
Sbjct: 138 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 197

Query: 193 DGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDS 252
            GY K G +E+AR +FDEMP RN+ +WS M+  Y++ + F + + LF  M+++ +V N++
Sbjct: 198 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 257

Query: 253 VIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGI 312
           V+VSV+++CAHLGA+  G   + Y  +  +  N IL TALVDM+ +CG IE A+ VFEG+
Sbjct: 258 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 317

Query: 313 SNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGL 372
              D+ +W+++I G A+ G+  K++  F +MI+ G    + TF ++L+AC+H  +VE+GL
Sbjct: 318 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 377

Query: 373 EFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSA 432
           E ++ M   + ++P+ EHY C+VD++ RAG + +AE F+   +      +A + GA+L A
Sbjct: 378 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI---LKMHVKPNAPILGALLGA 437

Query: 433 CRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIP 492
           C+ Y+N E+ +R+   L  +     G  VL  NI++ AG+    + +R    E   KK P
Sbjct: 438 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 497

Query: 493 GCSVIVVDGAVQEFLAG-DLSHPQVQHI 512
           G S+I +DG + +F  G D  HP++  I
Sbjct: 498 GWSLIEIDGKINKFTMGDDQKHPEMGKI 515

[Close]

BLAST of Cucsa.301750.1 vs. TAIR10
Match: AT5G59200.1 (AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-85
Identity = 172/515 (33.40%), Postives = 295/515 (57.28%), Query Frame = 1


Query: 13  LLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQ 72
           +LR CK++ H+  IHA +++T+  Q  + +  L+ V +T     DS   YA  +F  +  
Sbjct: 35  VLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTL----DSV-DYAYDVFSYVSN 94

Query: 73  RNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACAL-VYRELKRIG 132
            N+++Y +MI G+  S      +  Y  ++    L + Y    ++KAC L V RE     
Sbjct: 95  PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE----- 154

Query: 133 YLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGYGKV 192
             +HA V+ LG+ +   V   ++E Y    +L  A+ +FD+   +D V  TVM++ Y + 
Sbjct: 155 --IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 214

Query: 193 GDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVL 252
           G I+ A  LF ++  ++ + W+AM+    R  +  + L LFR+MQ +N+  N+   V VL
Sbjct: 215 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 274

Query: 253 TACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAG 312
           +AC+ LGA+  G W+HS+ +   ++ +  +  AL++MYS+CG I  A  VF  + +KD  
Sbjct: 275 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 334

Query: 313 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 372
           ++N MISG AM G  V+++  F  M+  G +  + T V++L AC+H  +++ GLE F+ M
Sbjct: 335 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 394

Query: 373 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 432
             V+ V+PQ EHY C+VDL+ R G +E+A +F+E         D  + G +LSAC+ + N
Sbjct: 395 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLSACKIHGN 454

Query: 433 IEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIV 492
           +E+G++I  +L      D GT VL  N+++ +G+   + E+R+   ++  +K PGCS I 
Sbjct: 455 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 514

Query: 493 VDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWE 526
           VD  + EFL GD++HP  + I + L  L+++++++
Sbjct: 515 VDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFK 534

[Close]

BLAST of Cucsa.301750.1 vs. TAIR10
Match: AT2G20540.1 (AT2G20540.1 mitochondrial editing factor 21)

HSP 1 Score: 311.6 bits (797), Expect = 9.2e-85
Identity = 168/497 (33.80%), Postives = 281/497 (56.54%), Query Frame = 1


Query: 12  PLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQ 71
           P L++ KS    K+I+A ++   LSQS + +  +++      CD+     YA  +F  + 
Sbjct: 15  PFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDF-----CDKIEDMDYATRLFNQVS 74

Query: 72  QRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGF-LANKYTFPPLIKACALVYRELKRI 131
             N+F+YNS+IR Y  +      I  Y  L+ + F L +++TFP + K+CA +      +
Sbjct: 75  NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY--L 134

Query: 132 GYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGKDVVVWTVMVDGYGK 191
           G  VH H+   G        +AL++ Y  FD L  A  +FD+   +DV+ W  ++ GY +
Sbjct: 135 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 194

Query: 192 VGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSV 251
           +G ++ A+ LF  M ++ ++SW+AM++ Y+ +  + E +  FR+MQ   I P++  ++SV
Sbjct: 195 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 254

Query: 252 LTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDA 311
           L +CA LG++  G W+H YA+R G      +  AL++MYSKCG I  A+++F  +  KD 
Sbjct: 255 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 314

Query: 312 GAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQ 371
            +W+ MISG+A  GN   ++E F++M  +  +    TF+ +L+AC+H  M + GL +FD 
Sbjct: 315 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 374

Query: 372 MYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYR 431
           M   Y+++P+ EHY C++D++ARAG +E A +  +         D+ +WG++LS+CR   
Sbjct: 375 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKIWGSLLSSCRTPG 434

Query: 432 NIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVI 491
           N+++       L  L   D G  VL  NI+++ G+      +RK       KK PG S+I
Sbjct: 435 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 494

Query: 492 VVDGAVQEFLAGDLSHP 507
            V+  VQEF++GD S P
Sbjct: 495 EVNNIVQEFVSGDNSKP 501

[Close]

BLAST of Cucsa.301750.1 vs. NCBI nr
Match: gi|700195082|gb|KGN50259.1| (hypothetical protein Csa_5G162080 [Cucumis sativus])

HSP 1 Score: 1051.2 bits (2717), Expect = 6.0e-304
Identity = 526/528 (99.62%), Postives = 526/528 (99.62%), Query Frame = 1


Query: 1   MIHQTFNIAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN AISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF
Sbjct: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC
Sbjct: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVI SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480
           ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480

Query: 481 KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK 529
           KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK
Sbjct: 481 KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK 528

[Close]

BLAST of Cucsa.301750.1 vs. NCBI nr
Match: gi|659073452|ref|XP_008437067.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Cucumis melo])

HSP 1 Score: 1013.8 bits (2620), Expect = 1.1e-292
Identity = 506/528 (95.83%), Postives = 517/528 (97.92%), Query Frame = 1


Query: 1   MIHQTFNIAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN AISPLLRKCKSVQHLKQIHAHLLKTYL Q+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GFLANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480

Query: 481 KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK 529
           KKIPGCSVI VDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK
Sbjct: 481 KKIPGCSVIEVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK 528

[Close]

BLAST of Cucsa.301750.1 vs. NCBI nr
Match: gi|778700104|ref|XP_004152427.2| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus])

HSP 1 Score: 935.6 bits (2417), Expect = 3.7e-269
Identity = 468/470 (99.57%), Postives = 468/470 (99.57%), Query Frame = 1


Query: 1   MIHQTFNIAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN AISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF
Sbjct: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC
Sbjct: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVI SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 471
           ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsa.301750.1 vs. NCBI nr
Match: gi|659073456|ref|XP_008437069.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X2 [Cucumis melo])

HSP 1 Score: 900.6 bits (2326), Expect = 1.3e-258
Identity = 449/470 (95.53%), Postives = 460/470 (97.87%), Query Frame = 1


Query: 1   MIHQTFNIAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN AISPLLRKCKSVQHLKQIHAHLLKTYL Q+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GFLANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 471
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsa.301750.1 vs. NCBI nr
Match: gi|225445484|ref|XP_002282063.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vinifera])

HSP 1 Score: 689.9 bits (1779), Expect = 3.5e-195
Identity = 335/517 (64.80%), Postives = 414/517 (80.08%), Query Frame = 1


Query: 10  ISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKN 69
           ++ LL+KC+++  LKQIHA+LL+++L +SP+AI  LL +AATS  +  SFFS+AC IF+N
Sbjct: 14  LNSLLKKCRALSQLKQIHANLLQSHLPESPFAIGQLLSLAATS--NNPSFFSHACLIFQN 73

Query: 70  LQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKR 129
           L  RNIFMYNSMIRGY LS  P +AILCYLD+++ G LAN YTFPPLIKAC  +    K 
Sbjct: 74  LSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKL 133

Query: 130 IGYLVHAHVIVLGYENDAFVVSALVEFYSL-FDLKVARVLFDKSSGKDVVVWTVMVDGYG 189
           IG LVHAHV+  G++ D FVVSAL+EFYSL FD+  AR LFD+   +DVV+WT M+DGYG
Sbjct: 134 IGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYG 193

Query: 190 KVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVS 249
           K+GD+E AR+LF++MPERN ISWSA+MAAYSRV DF+EVLCLFR+MQ+   +PN+SV+VS
Sbjct: 194 KMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVS 253

Query: 250 VLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKD 309
           VLTACAHLGA+ QGLW+HSYAK+   DSNPILATALVDMYSKCG +ESAL  F+GI NKD
Sbjct: 254 VLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKD 313

Query: 310 AGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFD 369
           AGAWNAMISG AM G+  KSLELF+KMI++GTQ TE TFV++L ACTHA++V+ GL+ F+
Sbjct: 314 AGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFE 373

Query: 370 QMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQY 429
           QM   Y V+PQ EHYAC+VDLMARAGM+ +AEKF+EEKMGG    DANVWGA+L ACR Y
Sbjct: 374 QMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTY 433

Query: 430 RNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSV 489
            NIE+G+R+W KL+ +G+ D GT VLSYN++ EAG +M AK VR+  SEA  KK PGCS+
Sbjct: 434 GNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKKPGCSI 493

Query: 490 IVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWE 526
           I VDG V+EFLAGDLSH Q   IC+ L  LS + + E
Sbjct: 494 IEVDGTVEEFLAGDLSHSQAPQICKTLDSLSNIGRLE 528

The following BLAST results are available for this feature:

BLAST of Cucsa.301750.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP449_ARATH	1.2e-97	37.92	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN...	[more]
PP425_ARATH	1.0e-93	35.65	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN...	[more]
PP367_ARATH	1.7e-88	35.83	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN...	[more]
PP435_ARATH	1.9e-84	33.40	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS...	[more]
PP165_ARATH	1.6e-83	33.80	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN...	[more]

BLAST of Cucsa.301750.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMY1_CUCSA	4.2e-304	99.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162080 PE=4 SV=1	[more]
M5W1U7_PRUPE	5.3e-182	62.79	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021060mg PE=4 S...	[more]
A0A067KJF2_JATCU	7.7e-181	61.20	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13320 PE=4 SV=1	[more]
A5AXT8_VITVI	1.3e-175	66.74	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026273 PE=4 SV=1	[more]
A0A072TJ84_MEDTR	1.7e-175	59.27	PPR containing plant-like protein OS=Medicago truncatula GN=MTR_0011s0300 PE=4 S...	[more]

BLAST of Cucsa.301750.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66520.1	6.6e-99	37.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	5.8e-95	35.65	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G06540.1	9.5e-90	35.83	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G59200.1	1.1e-85	33.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	9.2e-85	33.80	mitochondrial editing factor 21	[more]

BLAST of Cucsa.301750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195082\|gb\|KGN50259.1\|	6.0e-304	99.62	hypothetical protein Csa_5G162080 [Cucumis sativus]	[more]
gi\|659073452\|ref\|XP_008437067.1\|	1.1e-292	95.83	PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1...	[more]
gi\|778700104\|ref\|XP_004152427.2\|	3.7e-269	99.57	PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis s...	[more]
gi\|659073456\|ref\|XP_008437069.1\|	1.3e-258	95.53	PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X2...	[more]
gi\|225445484\|ref\|XP_002282063.1\|	3.5e-195	64.80	PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vin...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.301750	Cucsa.301750	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.301750.1	Cucsa.301750.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301750.1.five_prime_UTR.1	Cucsa.301750.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301750.1.CDS.1	Cucsa.301750.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301750.1.three_prime_UTR.1	Cucsa.301750.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 76..106 score: 0.013coord: 282..302 score: 0.028coord: 346..370 score: 0.67coord: 311..339 score: 1.
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 176..203 score: 1.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 207..254 score: 8.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 209..242 score: 4.0E-8coord: 178..208 score: 8.8E-7coord: 312..340 score: 3.1E-6coord: 77..109 score: 0.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 176..206 score: 10.567coord: 277..307 score: 7.498coord: 343..373 score: 6.467coord: 242..276 score: 5.546coord: 308..342 score: 10.665coord: 74..108 score: 8.473coord: 207..241 score: 11.707coord: 414..448 score: 6.303coord: 379..410 score:
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 177..367 score: 6.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 23..489 score: 2.4E
None	No IPR available	PANTHER	PTHR24015:SF682	SUBFAMILY NOT NAMED	coord: 23..489 score: 2.4E