Cucsa.277590.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTATATACCTCCACACAAACGTCATTCAAGGGATATGGAGAATACATCTCCTACACCGGAGTCGCTTTCTTCTCAATTCAACAGAAAATTGAATTTGAAACGAAAGTTTAATGGAAAGCTTACTATTACATATGCTGAGGGGGCTATATCCAAATGGTTCGTGATTGGTAGTTCTGATGATGGTAACCAGTTTCTCCCCTGTGTTCATCTCGAGCCATTCTCTGTGCCATCCATTGAACTTAAATGGGGTGAAAAACCTCTAGCTTTGCTGAACTCTAGTGTATCTCAAGGTAATAGAACTATGCCATGGAGTTTCTCTGGCCTTGTTGTATGTATTTGGTACTTTCTGTTGATGAATAAACAACTTAATAAAAAGAAGGCATTTGACTTGTTGTTAATGATTATAGGGAATAGAGAAGAGGAAGAAGAAACCGAAACAGGACCATGGGAATCTATCATAGTAAATTTACTGCCAGAATTACTTTCATCGGTTGAACACATAAAGAACGAACTGTATCAACATGATGGTGTGAAGCCAAAATTGGTAGCTAGAGTTGGAAAAGTTCTCTTTCATGGGTAGGGAATCCCTTGTTTGTCAGCAAAACATACCATAAGATTTTAGTTGTCGTCACTGTTTACTTCTGCATGTTACTTGTATAAAATCTTCGTCAAATTATTTTTGAAATATGAGGTTGTCAAGTTTTTtTTTtCATTCTTTGTTAGAAGATGGTTATTATCTTTGTTATGCAGGATTTCTAAAATTGACAGAAATGAGTTACCTACTGAAAGGACATTGAGACAGCTGAAGGGCTTGTTTTATACAAGTGTCTCTGACACTTACATGGAAAACCGTACAGAAAGAGTAATTCCACTTATTGGATTAGAGTTTGAAGTGGAAAAAGATATATATATTGTCAAGGTAGTTGTTTCGCCTTGTAAATAAGTATGTTATGTTATGCTTGCAAGGATTTCAAACTTTGATGCTACTTGATTTTGATTTCCTTTCCTTTTGGTGTCTCAAACTTTTTTTAGGTATCTGATGAAGAGCGCCCATCGGTGACTTTATCGTGCAAATGTATTGCTTTGCCCCATTCGAATAATCTTAAACTTTATAAGGTAAACCTTTGTTTGTTTtCCTATCTGATTAATTGTATAAACTAATGATATCAATATTTTGCTTCATTTTTAAGCAATATTGTTTCTACACCAATGAAATGTTATTCCTCTAAGTTGCAATTCACAGTTGCTGAGCAAAATTTTGATTTATTTTGTAGGTTGAAATCAACCAAGTGCGCCATATGGTTGGAGATATTTCATGCCTAAAACAGAATGTTGACATGAGGCTCATGCTATACTCCAAGAAGAATTTACAAAAGCTGACAGTAAGCCCTCTAAATCTATATATTCAAATGCGATTTATAGAAATTCATCTTGATTTTCTTTATAGCATATTGTACTTTTTTCATTTGATTTCCAACAGTTTCCGTAATTTCACCAACTTCTTATTCTTTTAACATTTCAACATTCGTTTCATTGGGATTTTGCAATCTTTTCTTTAAATATTAAATTATCTTATATAGATTAAGCTAAGCATGTGAACCCCTTAGTACCAGTTTATTGATTGAAAAACGCTTTTGGTTTCATACTTTATCAAAGTAACAAATTAGTGTGTATACTTTTATGTGTTACAATTTGCTCTCGTAACTTTAACGTATATCAATTTGGTTTGTCTAATCTGAAGTTTATAAACATTAGTTTCTATCATAGAAAAATGTCTAATTTGAAGTTTACAATTTGATCTCTTAACTTTTCCTCTGTTGTGAACAACTTTCCTTTCTTACTCGTGGGTTTTATGAGTTAACTTAAGAAAAGCAATTTCCAAATGTATGTGCCATATGTTTGGATTGTTTCCCCTCATAGCTTGTGTTCTGCATCGATGTTGTTAGAACTGATTGTATTAGCTAATTTGATCAACCCATTTTGTAGAAATGTAGAATCCTGTTCTAAGTTTTTATATCTCTATTTAAGAAGCTTCTTTGTCTGTCTTAAGCTACAAATGAATAAAAAGTAGGGTGCAGGTTACAACATATCAATCTTTTATATATCTTCCTAGTGCATGTTAACATTTGATGGGATTTGAACTGAAGATAAACTGTCATTGGAATCAAAGTTAAGTATTGATTTCTTATTTATTACAATGTAGTACTTGATGCTTATAAAACATTTAGTTCTTAAATAGTTTATCAATCAGCATATTAGGAACCTCATTGAAATTTAACAAGATTTAATATGAACTAAGTTGTTTGAAATGAATTATATAGACTAAATTGTTGCATGCAATGAAATAGTTATCTTGCAATGGTTTTACTATTCTTACAGATAGTTAACACCTTCATACATGAAGCTGAAAAGAACATGCACCTGGACTTGCACAACTAATATTTTGGTGTAAAATAAATTCTGTAAAATACTGCAGATTTGATGTTTTTACTtAGTTGAAGGAATTAAATTAATTATTGAGACCCACCTTAAATCTTGTATGCTACTAGGATGATGAGATGGAAGGCATAGTAGGTCTTATAAACTCTGCTGTTTTAGACCAAGATATGATGGGTGGCTTAAGATGGCCTCTGGGGAAAGCGACCTCAGGGAATAGATTCAGAGTGGTTGAAGTTTGGCACACTGTTTCCAAGTATTATGTAAACCCATTTTTGAGGCTCCAACTAAGAAATGCCAATCGATATGATCTCAGCACCTCGATTGGTGAAGCGTCAAAAGAGGTTACTCTGAATCTGAAACATGTTACTTTTGAACTACTGGTAAGCATATTCCTTACTGTAAGCATGAATATGATTTTTGCTCCAAAAAAAATGATGCTGTACCTTTGACTGTTAAACCATTAAACGTGTGGCTCTTTTTACATTATGAATTTTTAGGATTTTTCAGGCAAACACTCATTGTTATATATTTTCTTCAAGGAAAATCAATTAACAGTAATGTTGATAAGAAAACGGTTACAATTGATAGAAATAAGAACCAGCACTTCTCAATACGTTCTAGAGGGTTGAGTTTCCTCTCCCAAGAGCCCCTAGCCTCACTCACATGGACTATTTTATAACTCAACAAAATTAATGTTTAGTTACTAGAATGTCCCTTTCTATTGATCATAGTGATATATTTCCAACTAGGAGATCACCAAACAAAATAGCTCTCTGTTTATATGGTGATATGATATTGTTGGAGTGTGTATTTTTGACTGGGAAGAATATCTTTTATTTTAATTGCTATGGGGCTATGTTAACAGTTGTATGTTTCTTAGATACAATAATGATTTTGAGTGAGCTGAAATGCAGGCAGATTATTGTTTCGATTATTTTGTTTGTAGAGAGAAAAAGTTGAGTATGATGTGATAATAGATATGCTTAAAGACCACCTGAAGCTGTTTTGGAAGCATTTTGTGTGCTCTGCTTGCAGTGGTAGTGTGCAAATGCAGGAGATTTGA ATGGCTTATATACCTCCACACAAACGTCATTCAAGGGATATGGAGAATACATCTCCTACACCGGAGTCGCTTTCTTCTCAATTCAACAGAAAATTGAATTTGAAACGAAAGTTTAATGGAAAGCTTACTATTACATATGCTGAGGGGGCTATATCCAAATGGTTCGTGATTGGTAGTTCTGATGATGGTAACCAGTTTCTCCCCTGTGTTCATCTCGAGCCATTCTCTGTGCCATCCATTGAACTTAAATGGGGTGAAAAACCTCTAGCTTTGCTGAACTCTAGTGTATCTCAAGGGAATAGAGAAGAGGAAGAAGAAACCGAAACAGGACCATGGGAATCTATCATAGTAAATTTACTGCCAGAATTACTTTCATCGGTTGAACACATAAAGAACGAACTGTATCAACATGATGGTGTGAAGCCAAAATTGGTAGCTAGAGTTGGAAAAGTTCTCTTTCATGGGATTTCTAAAATTGACAGAAATGAGTTACCTACTGAAAGGACATTGAGACAGCTGAAGGGCTTGTTTTATACAAGTGTCTCTGACACTTACATGGAAAACCGTACAGAAAGAGTAATTCCACTTATTGGATTAGAGTTTGAAGTGGAAAAAGATATATATATTGTCAAGGTATCTGATGAAGAGCGCCCATCGGTGACTTTATCGTGCAAATGTATTGCTTTGCCCCATTCGAATAATCTTAAACTTTATAAGGTTGAAATCAACCAAGTGCGCCATATGGTTGGAGATATTTCATGCCTAAAACAGAATGTTGACATGAGGCTCATGCTATACTCCAAGAAGAATTTACAAAAGCTGACAGATGATGAGATGGAAGGCATAGTAGGTCTTATAAACTCTGCTGTTTTAGACCAAGATATGATGGGTGGCTTAAGATGGCCTCTGGGGAAAGCGACCTCAGGGAATAGATTCAGAGTGGTTGAAGTTTGGCACACTGTTTCCAAGTATTATGTAAACCCATTTTTGAGGCTCCAACTAAGAAATGCCAATCGATATGATCTCAGCACCTCGATTGGTGAAGCGTCAAAAGAGGTTACTCTGAATCTGAAACATGTTACTTTTGAACTACTGAGAGAAAAAGTTGAGTATGATGTGATAATAGATATGCTTAAAGACCACCTGAAGCTGTTTTGGAAGCATTTTGTGTGCTCTGCTTGCAGTGGTAGTGTGCAAATGCAGGAGATTTGA ATGGCTTATATACCTCCACACAAACGTCATTCAAGGGATATGGAGAATACATCTCCTACACCGGAGTCGCTTTCTTCTCAATTCAACAGAAAATTGAATTTGAAACGAAAGTTTAATGGAAAGCTTACTATTACATATGCTGAGGGGGCTATATCCAAATGGTTCGTGATTGGTAGTTCTGATGATGGTAACCAGTTTCTCCCCTGTGTTCATCTCGAGCCATTCTCTGTGCCATCCATTGAACTTAAATGGGGTGAAAAACCTCTAGCTTTGCTGAACTCTAGTGTATCTCAAGGGAATAGAGAAGAGGAAGAAGAAACCGAAACAGGACCATGGGAATCTATCATAGTAAATTTACTGCCAGAATTACTTTCATCGGTTGAACACATAAAGAACGAACTGTATCAACATGATGGTGTGAAGCCAAAATTGGTAGCTAGAGTTGGAAAAGTTCTCTTTCATGGGATTTCTAAAATTGACAGAAATGAGTTACCTACTGAAAGGACATTGAGACAGCTGAAGGGCTTGTTTTATACAAGTGTCTCTGACACTTACATGGAAAACCGTACAGAAAGAGTAATTCCACTTATTGGATTAGAGTTTGAAGTGGAAAAAGATATATATATTGTCAAGGTATCTGATGAAGAGCGCCCATCGGTGACTTTATCGTGCAAATGTATTGCTTTGCCCCATTCGAATAATCTTAAACTTTATAAGGTTGAAATCAACCAAGTGCGCCATATGGTTGGAGATATTTCATGCCTAAAACAGAATGTTGACATGAGGCTCATGCTATACTCCAAGAAGAATTTACAAAAGCTGACAGATGATGAGATGGAAGGCATAGTAGGTCTTATAAACTCTGCTGTTTTAGACCAAGATATGATGGGTGGCTTAAGATGGCCTCTGGGGAAAGCGACCTCAGGGAATAGATTCAGAGTGGTTGAAGTTTGGCACACTGTTTCCAAGTATTATGTAAACCCATTTTTGAGGCTCCAACTAAGAAATGCCAATCGATATGATCTCAGCACCTCGATTGGTGAAGCGTCAAAAGAGGTTACTCTGAATCTGAAACATGTTACTTTTGAACTACTGAGAGAAAAAGTTGAGTATGATGTGATAATAGATATGCTTAAAGACCACCTGAAGCTGTTTTGGAAGCATTTTGTGTGCTCTGCTTGCAGTGGTAGTGTGCAAATGCAGGAGATTTGA MAYIPPHKRHSRDMENTSPTPESLSSQFNRKLNLKRKFNGKLTITYAEGAISKWFVIGSSDDGNQFLPCVHLEPFSVPSIELKWGEKPLALLNSSVSQGNREEEEETETGPWESIIVNLLPELLSSVEHIKNELYQHDGVKPKLVARVGKVLFHGISKIDRNELPTERTLRQLKGLFYTSVSDTYMENRTERVIPLIGLEFEVEKDIYIVKVSDEERPSVTLSCKCIALPHSNNLKLYKVEINQVRHMVGDISCLKQNVDMRLMLYSKKNLQKLTDDEMEGIVGLINSAVLDQDMMGGLRWPLGKATSGNRFRVVEVWHTVSKYYVNPFLRLQLRNANRYDLSTSIGEASKEVTLNLKHVTFELLREKVEYDVIIDMLKDHLKLFWKHFVCSACSGSVQMQEI*
BLAST of Cucsa.277590.1 vs. TrEMBL
Match: A0A0A0LHP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083700 PE=4 SV=1) HSP 1 Score: 733.0 bits (1891), Expect = 1.9e-208 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. TrEMBL
Match: M5WB14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006260mg PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 9.6e-99 Identity = 197/401 (49.13%), Postives = 276/401 (68.83%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. TrEMBL
Match: D7TDU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00860 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 4.5e-96 Identity = 192/412 (46.60%), Postives = 264/412 (64.08%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. TrEMBL
Match: A0A067JLW5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23611 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 4.5e-96 Identity = 197/401 (49.13%), Postives = 265/401 (66.08%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. TrEMBL
Match: A0A061F8D4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026052 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.3e-95 Identity = 198/400 (49.50%), Postives = 261/400 (65.25%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. TAIR10
Match: AT2G38430.1 (AT2G38430.1 unknown protein) HSP 1 Score: 264.2 bits (674), Expect = 1.3e-70 Identity = 142/396 (35.86%), Postives = 228/396 (57.58%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. TAIR10
Match: AT3G54310.1 (AT3G54310.1 unknown protein) HSP 1 Score: 228.4 bits (581), Expect = 7.8e-60 Identity = 146/398 (36.68%), Postives = 217/398 (54.52%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. NCBI nr
Match: gi|778668027|ref|XP_011649026.1| (PREDICTED: uncharacterized protein LOC101218529 [Cucumis sativus]) HSP 1 Score: 811.6 bits (2095), Expect = 6.1e-232 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. NCBI nr
Match: gi|700206204|gb|KGN61323.1| (hypothetical protein Csa_2G083700 [Cucumis sativus]) HSP 1 Score: 733.0 bits (1891), Expect = 2.8e-208 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. NCBI nr
Match: gi|659082381|ref|XP_008441810.1| (PREDICTED: uncharacterized protein LOC103485862 isoform X1 [Cucumis melo]) HSP 1 Score: 720.3 bits (1858), Expect = 1.9e-204 Identity = 361/398 (90.70%), Postives = 372/398 (93.47%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. NCBI nr
Match: gi|659082383|ref|XP_008441811.1| (PREDICTED: uncharacterized protein LOC103485862 isoform X2 [Cucumis melo]) HSP 1 Score: 661.8 bits (1706), Expect = 7.9e-187 Identity = 332/365 (90.96%), Postives = 343/365 (93.97%), Query Frame = 1
BLAST of Cucsa.277590.1 vs. NCBI nr
Match: gi|778674115|ref|XP_011650137.1| (PREDICTED: uncharacterized protein LOC105434728 [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 4.7e-107 Identity = 222/404 (54.95%), Postives = 277/404 (68.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
|