BLAST of Cucsa.232950.1 vs. Swiss-Prot
Match:
LHCA5_ARATH (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana GN=LHCA5 PE=1 SV=1)
HSP 1 Score: 363.2 bits (931), Expect = 2.3e-99
Identity = 171/210 (81.43%), Postives = 191/210 (90.95%), Query Frame = 1
Query: 50 RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLT 109
R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGV+G+L T
Sbjct: 46 RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFT 105
Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
DLLR TGI LPVWY AGAV++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+EG+
Sbjct: 106 DLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGS 165
Query: 170 -FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
FFGLEAA +GLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA
Sbjct: 166 FFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQAS 225
Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
VTHTGPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 226 VTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255
BLAST of Cucsa.232950.1 vs. Swiss-Prot
Match:
CA4_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=LHCA4 PE=1 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 3.1e-51
Identity = 114/253 (45.06%), Postives = 159/253 (62.85%), Query Frame = 1
Query: 14 HPSSSSYTPLFNPSQFL-----RLRSPSRRTLLIAHAQSEH------RQTWLPGLDPPPH 73
H S+S + P + +FL RL T + + A++ + WLPGL P +
Sbjct: 7 HASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDY 66
Query: 74 LDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPV 133
L G+LAGD GFDPLGL EDP++LKW+VQAELV+ R+AMLGV+G+LL ++ GI +P
Sbjct: 67 LTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE 126
Query: 134 WYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEP 193
WY+AG +Y FA+ TLF+++ +L +VE +R+ D K+PGS Q+ F + + E
Sbjct: 127 WYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEV 186
Query: 194 GYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHL 253
GYPGG + NPL A + K KE+ NGRLAM+A LG VQ VT GP +NL++HL
Sbjct: 187 GYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHL 246
Query: 254 SNPWHKTIIQTLS 256
S+PWH TI+QT +
Sbjct: 247 SDPWHNTIVQTFN 251
BLAST of Cucsa.232950.1 vs. Swiss-Prot
Match:
CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1)
HSP 1 Score: 203.0 bits (515), Expect = 4.0e-51
Identity = 106/207 (51.21%), Postives = 141/207 (68.12%), Query Frame = 1
Query: 53 WLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLL 112
WLPGL P +L G+L GD GFDPLGL EDP++L+W+VQAELV+ R+AMLGV+G+LL ++
Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVF 115
Query: 113 RVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTF-- 172
GI +P WY AG EY FA+ TLF+++ +L +VE +R+ D K+PGS Q+ F
Sbjct: 116 TSIGIINVPKWYAAGKEEY-FASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQ 175
Query: 173 FGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT 232
+ L A E GYPGG + NPL A + + K KEI NGRLAM+A LG +Q VT
Sbjct: 176 YSLPAG----EVGYPGG-IFNPLNFAPTL----EAKEKEIANGRLAMLAFLGFIIQHNVT 235
Query: 233 HTGPIDNLVEHLSNPWHKTIIQTLSSS 258
GP DNL++H+S+PWH TI+QTL +
Sbjct: 236 GKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of Cucsa.232950.1 vs. Swiss-Prot
Match:
CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 4.9e-49
Identity = 104/221 (47.06%), Postives = 132/221 (59.73%), Query Frame = 1
Query: 36 SRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVH 95
+R + A R W PG PPP LDG+L GDFGFDPLGL DP+SL+W QAELVH
Sbjct: 51 ARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVH 110
Query: 96 CRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRY 155
CR+AMLG +G+ + +LL GI P WY AG EY F + TLFIV+L+L+G+ E +R+
Sbjct: 111 CRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEY-FTDTTTLFIVELVLIGWAEGRRW 170
Query: 156 MDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGR 215
D PG + F G + GYPGG +PLG + + KEIKNGR
Sbjct: 171 ADIIKPGCVNTDPIF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 230
Query: 216 LAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS 256
LAM+A++G + Q T TGPIDNL HL++P H TI S
Sbjct: 231 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of Cucsa.232950.1 vs. Swiss-Prot
Match:
LHCA2_ARATH (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=LHCA2 PE=1 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 4.9e-49
Identity = 103/209 (49.28%), Postives = 129/209 (61.72%), Query Frame = 1
Query: 43 AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLG 102
A A R W PG PP LDG+L GDFGFDPLGL DP SLKW VQAE+VHCR+AMLG
Sbjct: 45 AVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLG 104
Query: 103 VSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPG 162
+G+ + + L GI P WY AG EY F +K TLF+V+L+L+G+ E +R+ D PG
Sbjct: 105 AAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADIIKPG 164
Query: 163 SQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAML 222
S + F G + GYPGG +PLG + + KEIKNGRLAM+A++
Sbjct: 165 SVNTDPVF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVM 224
Query: 223 GIFVQAYVTHTGPIDNLVEHLSNPWHKTI 251
G + Q T TGPIDNL HL++P H TI
Sbjct: 225 GAWFQHIYTGTGPIDNLFAHLADPGHATI 250
BLAST of Cucsa.232950.1 vs. TrEMBL
Match:
A0A0A0LRB4_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_2G357290 PE=3 SV=1)
HSP 1 Score: 530.8 bits (1366), Expect = 9.4e-148
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1
Query: 1 MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60
MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP
Sbjct: 1 MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60
Query: 61 PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL 120
PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL
Sbjct: 61 PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL 120
Query: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL 180
PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL
Sbjct: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL 180
Query: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE
Sbjct: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
Query: 241 HLSNPWHKTIIQTLSSSSP 260
HLSNPWHKTIIQTLSSSSP
Sbjct: 241 HLSNPWHKTIIQTLSSSSP 259
BLAST of Cucsa.232950.1 vs. TrEMBL
Match:
A0A0F7GZW1_9ROSI (Chlorophyll a-b binding protein, chloroplastic OS=California macrophylla GN=LHCA5 PE=2 SV=1)
HSP 1 Score: 389.4 bits (999), Expect = 3.4e-105
Identity = 179/231 (77.49%), Postives = 208/231 (90.04%), Query Frame = 1
Query: 27 SQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLK 86
S F PSR + + +++ R TWLPGLDPPP+L+GTLAGD+GFDPLGLGEDP+SLK
Sbjct: 27 SSFCFSAKPSRHSYTVPVVRAQERPTWLPGLDPPPYLNGTLAGDYGFDPLGLGEDPESLK 86
Query: 87 WYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLL 146
WYVQAELVHCRFAM GV+G+L+TDLLRVTG+S LPVWY AGA+++GFA+ TLF+VQ++L
Sbjct: 87 WYVQAELVHCRFAMAGVAGILVTDLLRVTGLSNLPVWYEAGAMKFGFASTTTLFLVQMIL 146
Query: 147 MGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWK 206
MGFVETKRYMDF +PGSQA++GTFFGLEAAF+GLEPGYPGGP+LNPLG+AKDIKNAHDWK
Sbjct: 147 MGFVETKRYMDFINPGSQAEDGTFFGLEAAFEGLEPGYPGGPILNPLGLAKDIKNAHDWK 206
Query: 207 LKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSS 258
LKEIKNGRLAM+AMLGIFVQA VTH GPIDNLV+HLSNPWHKTI+QTLS S
Sbjct: 207 LKEIKNGRLAMIAMLGIFVQASVTHAGPIDNLVDHLSNPWHKTIVQTLSCS 257
BLAST of Cucsa.232950.1 vs. TrEMBL
Match:
A0A0F7GZR5_9ROSI (Chlorophyll a-b binding protein, chloroplastic OS=Geranium maderense GN=LHCA5 PE=2 SV=1)
HSP 1 Score: 388.3 bits (996), Expect = 7.5e-105
Identity = 184/247 (74.49%), Postives = 214/247 (86.64%), Query Frame = 1
Query: 12 HLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDF 71
H+H SS ++ P +PSR + + AQ R TWLPGLDPPPHL+GTLAGD+
Sbjct: 25 HIHRSSFGFSA--KPGV-----APSRHSRTVVRAQE--RPTWLPGLDPPPHLNGTLAGDY 84
Query: 72 GFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEY 131
GFDPLGLGEDP+SLKWYVQAEL+HCRFAM GV+G+LLTDLLRVTGIS +PVWY AGA+++
Sbjct: 85 GFDPLGLGEDPESLKWYVQAELMHCRFAMAGVAGILLTDLLRVTGISSIPVWYEAGAMKF 144
Query: 132 GFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLN 191
GFA+ RTLFIVQ++LMGFVETKRYMDF +PGSQA++GTFFGLEAA +GLEPGYPGGP+LN
Sbjct: 145 GFASTRTLFIVQMILMGFVETKRYMDFINPGSQAEDGTFFGLEAALEGLEPGYPGGPILN 204
Query: 192 PLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTII 251
PLG+AKDIKNAHDWKLKEIKNGRLAM+AMLG FVQA VTH GPIDNL EHLSNPWHKTI+
Sbjct: 205 PLGLAKDIKNAHDWKLKEIKNGRLAMIAMLGFFVQASVTHAGPIDNLAEHLSNPWHKTIV 262
Query: 252 QTLSSSS 259
QTL+++S
Sbjct: 265 QTLANNS 262
BLAST of Cucsa.232950.1 vs. TrEMBL
Match:
A0A0B2QQB3_GLYSO (Chlorophyll a-b binding protein, chloroplastic OS=Glycine soja GN=glysoja_022075 PE=3 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 1.7e-104
Identity = 181/212 (85.38%), Postives = 199/212 (93.87%), Query Frame = 1
Query: 47 SEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGV 106
++ R TWLPGLDPPPHLDGTLAGDFGFDPLGL EDP SL+WYVQAELVHCRFAMLGV G+
Sbjct: 73 AQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGI 132
Query: 107 LLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQ 166
L+TDLLRVTGIS++PVW+ AGAV+Y FAN +TLF+VQL+LMGFVETKRYMDF SPGSQA+
Sbjct: 133 LVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETKRYMDFVSPGSQAK 192
Query: 167 EGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQ 226
EG+FFGLEA+ KGLEPGYPGGPLLNPLG+AKDI NAHDWKLKEIKNGRLAMVAMLGIFVQ
Sbjct: 193 EGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQ 252
Query: 227 AYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
A VTH GPIDNLVEHLSNPWHKTIIQTL++SS
Sbjct: 253 ASVTHVGPIDNLVEHLSNPWHKTIIQTLANSS 284
BLAST of Cucsa.232950.1 vs. TrEMBL
Match:
I1K7Z5_SOYBN (Chlorophyll a-b binding protein, chloroplastic OS=Glycine max GN=GLYMA_06G039700 PE=3 SV=2)
HSP 1 Score: 387.1 bits (993), Expect = 1.7e-104
Identity = 181/212 (85.38%), Postives = 199/212 (93.87%), Query Frame = 1
Query: 47 SEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGV 106
++ R TWLPGLDPPPHLDGTLAGDFGFDPLGL EDP SL+WYVQAELVHCRFAMLGV G+
Sbjct: 73 AQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGI 132
Query: 107 LLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQ 166
L+TDLLRVTGIS++PVW+ AGAV+Y FAN +TLF+VQL+LMGFVETKRYMDF SPGSQA+
Sbjct: 133 LVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETKRYMDFVSPGSQAK 192
Query: 167 EGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQ 226
EG+FFGLEA+ KGLEPGYPGGPLLNPLG+AKDI NAHDWKLKEIKNGRLAMVAMLGIFVQ
Sbjct: 193 EGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQ 252
Query: 227 AYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
A VTH GPIDNLVEHLSNPWHKTIIQTL++SS
Sbjct: 253 ASVTHVGPIDNLVEHLSNPWHKTIIQTLANSS 284
BLAST of Cucsa.232950.1 vs. TAIR10
Match:
AT1G45474.1 (AT1G45474.1 photosystem I light harvesting complex gene 5)
HSP 1 Score: 363.2 bits (931), Expect = 1.3e-100
Identity = 171/210 (81.43%), Postives = 191/210 (90.95%), Query Frame = 1
Query: 50 RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLT 109
R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGV+G+L T
Sbjct: 46 RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFT 105
Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
DLLR TGI LPVWY AGAV++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+EG+
Sbjct: 106 DLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGS 165
Query: 170 -FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
FFGLEAA +GLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA
Sbjct: 166 FFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQAS 225
Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
VTHTGPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 226 VTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255
BLAST of Cucsa.232950.1 vs. TAIR10
Match:
AT3G47470.1 (AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A4)
HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52
Identity = 114/253 (45.06%), Postives = 159/253 (62.85%), Query Frame = 1
Query: 14 HPSSSSYTPLFNPSQFL-----RLRSPSRRTLLIAHAQSEH------RQTWLPGLDPPPH 73
H S+S + P + +FL RL T + + A++ + WLPGL P +
Sbjct: 7 HASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDY 66
Query: 74 LDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPV 133
L G+LAGD GFDPLGL EDP++LKW+VQAELV+ R+AMLGV+G+LL ++ GI +P
Sbjct: 67 LTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE 126
Query: 134 WYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEP 193
WY+AG +Y FA+ TLF+++ +L +VE +R+ D K+PGS Q+ F + + E
Sbjct: 127 WYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEV 186
Query: 194 GYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHL 253
GYPGG + NPL A + K KE+ NGRLAM+A LG VQ VT GP +NL++HL
Sbjct: 187 GYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHL 246
Query: 254 SNPWHKTIIQTLS 256
S+PWH TI+QT +
Sbjct: 247 SDPWHNTIVQTFN 251
BLAST of Cucsa.232950.1 vs. TAIR10
Match:
AT3G61470.1 (AT3G61470.1 photosystem I light harvesting complex gene 2)
HSP 1 Score: 196.1 bits (497), Expect = 2.8e-50
Identity = 103/209 (49.28%), Postives = 129/209 (61.72%), Query Frame = 1
Query: 43 AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLG 102
A A R W PG PP LDG+L GDFGFDPLGL DP SLKW VQAE+VHCR+AMLG
Sbjct: 45 AVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLG 104
Query: 103 VSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPG 162
+G+ + + L GI P WY AG EY F +K TLF+V+L+L+G+ E +R+ D PG
Sbjct: 105 AAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADIIKPG 164
Query: 163 SQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAML 222
S + F G + GYPGG +PLG + + KEIKNGRLAM+A++
Sbjct: 165 SVNTDPVF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVM 224
Query: 223 GIFVQAYVTHTGPIDNLVEHLSNPWHKTI 251
G + Q T TGPIDNL HL++P H TI
Sbjct: 225 GAWFQHIYTGTGPIDNLFAHLADPGHATI 250
BLAST of Cucsa.232950.1 vs. TAIR10
Match:
AT1G19150.1 (AT1G19150.1 photosystem I light harvesting complex gene 6)
HSP 1 Score: 169.1 bits (427), Expect = 3.6e-42
Identity = 92/208 (44.23%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 50 RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLT 109
R W PG PP LDG+L GDFGFDPLGLG DP +LKW+ QAEL+H R+AML V+G+++
Sbjct: 65 RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIP 124
Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
+ L G E WY+AG+ EY FA+ TLF+ Q++LMG+ E +R+ D PGS E
Sbjct: 125 ECLERLGFIENFSWYDAGSREY-FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPK 184
Query: 170 FFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
+ + GYPGG + + + + + KEIKNGRLAM+A LG QA
Sbjct: 185 Y--PHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAT 244
Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSS 257
T PI+NL+ HL++P H + +S
Sbjct: 245 YTSQDPIENLMAHLADPGHCNVFSAFTS 269
BLAST of Cucsa.232950.1 vs. TAIR10
Match:
AT1G61520.1 (AT1G61520.1 photosystem I light harvesting complex gene 3)
HSP 1 Score: 168.7 bits (426), Expect = 4.7e-42
Identity = 91/225 (40.44%), Postives = 133/225 (59.11%), Query Frame = 1
Query: 46 QSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSL------KWYVQAELVHCRFA 105
Q +R W +LDG+L GD+GFDPLGL DP+ +W E+++ RFA
Sbjct: 49 QGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFA 108
Query: 106 MLGVSGVLLTDLLRVTGI----SELPVWYNAGAVEYG-----FANKRTLFIVQLLLMGFV 165
MLG +G + ++L G+ + LP W+ G + +A+ TLF++++ LMGF
Sbjct: 109 MLGAAGAIAPEILGKAGLIPAETALP-WFQTGVIPPAGTYTYWADNYTLFVLEMALMGFA 168
Query: 166 ETKRYMDFKSPGSQAQEGTFFGLEAAFKGL-EPGYPGGPLLNPLGIAKDIKNAHDWKLKE 225
E +R D+ +PGS ++ F GLE G P YPGGP NPLG KD K+ + KLKE
Sbjct: 169 EHRRLQDWYNPGSMGKQ-YFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKE 228
Query: 226 IKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTL 255
+KNGRLAM+A+LG F+Q VT GP NL++HL++P + ++ +L
Sbjct: 229 VKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
BLAST of Cucsa.232950.1 vs. NCBI nr
Match:
gi|449466336|ref|XP_004150882.1| (PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Cucumis sativus])
HSP 1 Score: 530.8 bits (1366), Expect = 1.3e-147
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1
Query: 1 MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60
MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP
Sbjct: 1 MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60
Query: 61 PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL 120
PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL
Sbjct: 61 PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL 120
Query: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL 180
PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL
Sbjct: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL 180
Query: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE
Sbjct: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
Query: 241 HLSNPWHKTIIQTLSSSSP 260
HLSNPWHKTIIQTLSSSSP
Sbjct: 241 HLSNPWHKTIIQTLSSSSP 259
BLAST of Cucsa.232950.1 vs. NCBI nr
Match:
gi|659087761|ref|XP_008444623.1| (PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo])
HSP 1 Score: 503.1 bits (1294), Expect = 3.0e-139
Identity = 245/260 (94.23%), Postives = 253/260 (97.31%), Query Frame = 1
Query: 1 MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDP 60
MAVS SAAT HLHPSSSS+TPLFNP+ QF+RLRSPSR +LLIAHAQSEHRQTWLPGLDP
Sbjct: 1 MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDP 60
Query: 61 PPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISE 120
PP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFAMLGV+GVLLTDLLRVTGISE
Sbjct: 61 PPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISE 120
Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKG 180
LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+G
Sbjct: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
LEPGYPGGPLLNPLGIAKD+KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
Query: 241 EHLSNPWHKTIIQTLSSSSP 260
EHLSNPWHKTIIQTLSSSSP
Sbjct: 241 EHLSNPWHKTIIQTLSSSSP 260
BLAST of Cucsa.232950.1 vs. NCBI nr
Match:
gi|719969964|ref|XP_010270018.1| (PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Nelumbo nucifera])
HSP 1 Score: 392.5 bits (1007), Expect = 5.7e-106
Identity = 199/264 (75.38%), Postives = 218/264 (82.58%), Query Frame = 1
Query: 1 MAVSFSAATAL-HLHPSSSSYTPLF---NPSQFLRLRS-PSRRTLLIAHAQSEHRQTWLP 60
MAV+ A L SS S T +F N ++F R P+ R+ + A AQ R TWLP
Sbjct: 1 MAVAMGKAVFLGRCSTSSLSNTAIFRGRNINRFSAARPRPALRSSIAARAQ---RPTWLP 60
Query: 61 GLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVT 120
GLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVH RFAM GV+G+L TDLLRVT
Sbjct: 61 GLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHARFAMAGVAGILFTDLLRVT 120
Query: 121 GISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEA 180
GIS LP+WY AGAV++ FA+ TLFIVQL LMGFVETKRYMDF +PGSQA+EGTFFGLEA
Sbjct: 121 GISNLPIWYEAGAVKFEFASTETLFIVQLFLMGFVETKRYMDFTNPGSQAKEGTFFGLEA 180
Query: 181 AFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPI 240
A +GLEPGYPGGPLLNPLG+AKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTH GPI
Sbjct: 181 ALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHAGPI 240
Query: 241 DNLVEHLSNPWHKTIIQTLSSSSP 260
DNLV HLSNPWH+T+IQ LS SP
Sbjct: 241 DNLVTHLSNPWHRTVIQILSGVSP 261
BLAST of Cucsa.232950.1 vs. NCBI nr
Match:
gi|571458840|ref|XP_003528272.2| (PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like [Glycine max])
HSP 1 Score: 387.1 bits (993), Expect = 2.4e-104
Identity = 181/212 (85.38%), Postives = 199/212 (93.87%), Query Frame = 1
Query: 47 SEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGV 106
++ R TWLPGLDPPPHLDGTLAGDFGFDPLGL EDP SL+WYVQAELVHCRFAMLGV G+
Sbjct: 73 AQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGI 132
Query: 107 LLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQ 166
L+TDLLRVTGIS++PVW+ AGAV+Y FAN +TLF+VQL+LMGFVETKRYMDF SPGSQA+
Sbjct: 133 LVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETKRYMDFVSPGSQAK 192
Query: 167 EGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQ 226
EG+FFGLEA+ KGLEPGYPGGPLLNPLG+AKDI NAHDWKLKEIKNGRLAMVAMLGIFVQ
Sbjct: 193 EGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQ 252
Query: 227 AYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
A VTH GPIDNLVEHLSNPWHKTIIQTL++SS
Sbjct: 253 ASVTHVGPIDNLVEHLSNPWHKTIIQTLANSS 284
BLAST of Cucsa.232950.1 vs. NCBI nr
Match:
gi|590592316|ref|XP_007017245.1| (Light-harvesting complex I protein Lhca5 isoform 1 [Theobroma cacao])
HSP 1 Score: 387.1 bits (993), Expect = 2.4e-104
Identity = 188/239 (78.66%), Postives = 208/239 (87.03%), Query Frame = 1
Query: 20 YTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLG 79
Y P + L S RR IA Q++ R TWLPGLDPPP+LDGTLAGD+GFDPLGLG
Sbjct: 26 YKPSLGAASTLWSTSAPRRYGQIA-VQAQQRPTWLPGLDPPPYLDGTLAGDYGFDPLGLG 85
Query: 80 EDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTL 139
EDP+SLKWYVQAELVH RFAM GV+G+L TDLLRVTGIS LPVWY AGAV++ FA+ TL
Sbjct: 86 EDPESLKWYVQAELVHARFAMAGVAGILFTDLLRVTGISNLPVWYEAGAVKFDFASTGTL 145
Query: 140 FIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI 199
+VQLLLMGFVETKRYMDF SPGSQA+EG+FFGLEAA +GLEPGYPGGPLLNPLG+AKDI
Sbjct: 146 IVVQLLLMGFVETKRYMDFISPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDI 205
Query: 200 KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
KNAH+WKLKEIKNGRLAM+AMLGIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTL++SS
Sbjct: 206 KNAHEWKLKEIKNGRLAMIAMLGIFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLANSS 263
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
LHCA5_ARATH | 2.3e-99 | 81.43 | Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th... | [more] |
CA4_ARATH | 3.1e-51 | 45.06 | Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=LHCA... | [more] |
CB24_PEA | 4.0e-51 | 51.21 | Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE... | [more] |
CB12_SOLLC | 4.9e-49 | 47.06 | Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7... | [more] |
LHCA2_ARATH | 4.9e-49 | 49.28 | Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LRB4_CUCSA | 9.4e-148 | 100.00 | Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_2G35729... | [more] |
A0A0F7GZW1_9ROSI | 3.4e-105 | 77.49 | Chlorophyll a-b binding protein, chloroplastic OS=California macrophylla GN=LHCA... | [more] |
A0A0F7GZR5_9ROSI | 7.5e-105 | 74.49 | Chlorophyll a-b binding protein, chloroplastic OS=Geranium maderense GN=LHCA5 PE... | [more] |
A0A0B2QQB3_GLYSO | 1.7e-104 | 85.38 | Chlorophyll a-b binding protein, chloroplastic OS=Glycine soja GN=glysoja_022075... | [more] |
I1K7Z5_SOYBN | 1.7e-104 | 85.38 | Chlorophyll a-b binding protein, chloroplastic OS=Glycine max GN=GLYMA_06G039700... | [more] |
Match Name | E-value | Identity | Description | |
AT1G45474.1 | 1.3e-100 | 81.43 | photosystem I light harvesting complex gene 5 | [more] |
AT3G47470.1 | 1.7e-52 | 45.06 | light-harvesting chlorophyll-protein complex I subunit A4 | [more] |
AT3G61470.1 | 2.8e-50 | 49.28 | photosystem I light harvesting complex gene 2 | [more] |
AT1G19150.1 | 3.6e-42 | 44.23 | photosystem I light harvesting complex gene 6 | [more] |
AT1G61520.1 | 4.7e-42 | 40.44 | photosystem I light harvesting complex gene 3 | [more] |