Cucsa.201180.3 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.201180.3
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Coiled-coil domain-containing 90B, mitochondrial
Location	scaffold01374 : 124703 .. 128257 (+)
Sequence length	1368

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGTGTTTGAACCGTCCGTTTTTTAGTTGTTCGTATCATCGTCGGAGGAAAAGCTCAAGAATTTGAGGCGTCTTCTTCCCTTCCATTTCTTCCCAATTTCTTTGTTTCATCGCGAAGCAACCGCGAAATTTCCACGCCGTTCCTCCTTTTTCACTATTGGTGGCTGGGATCATCTTCATCGCTGTTCTTCCCTACAAAAaGGCTTTTTTTCCTCCATATTTTTtCCTCAATCCATTCTGAAATTCCAACACCTTAGTTCCTCAATCGATTTTCGATCCATTTTCACCCGAGATTTCTCCGTATACAGGTCAGTTTGTTGGCTATCTTCCTCCCTCTACAATTTTCTTACTTTTCGTTCTGTTCTTTGTGGAGAATGGTACAAAATGGTAGAATGAAATGGGGGTTATCTAATTTCTTTTTCTTGGGGGGTTGGTTTTGGAGTCAAATGGATGAAGCCCAGAACGGGTTGATGATTCGGGGATTGTTTTTATTAGGTCTTCTGAATTTTATTGGTTTATTGCATTTTTCTTtGTTTTTtCAACCAAAATTTCTGAAGTAAGATGGAATTGTTAGGGTTTCGTGAATCGAGTTTCGTTAAAAAAaTGTTCGGAATGTTGCCGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGACAATTGGTGGCCAATTCAGGTTTACGAAGGCTTGGAGTTTCGAATGTGTCTTCATTTGAAAGCTCAATCTTCGACCATTCAGCAAATAATTTGTCGGCATCCATCTCCTTGATTTCTCGGTACAGACACTATGAATGTAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACATTAGCCCTAGTAATTTCGCTCTCTTTATTCATTGCTTTTTCTCAGTATTGTTGCATCTTTCTATTGATTTCTGAAGGAAGATGGAGTGAAAATTTGAGAATCTCTTCTGCACGTTCATTAGGGGTTTTGGTAAGTGATTTAATTTATTTTCATCCAGGTTAGAAAATTGGAAGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATTACTGCTGCCATTACTGAAGTGCTAAATGACAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAGTGAGTTCCTATATACTCTACTTTTACATATTTTCAATTCTGCTTATGTTGGTATGGTTCAATGATGACAATATTCGATAACATCTATTTTTTAATTGTTCGCAATCTAACCAACCGTTGAATGTATATTGTCATCTGTTTGTAGATTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGTACCAATTTCTATCGCTTGTCTAACTAGTGTACTTCTTATACACCAATAGCTTGCATGATGGTCAAATAAAGAGTAATATTTGAATTTCTCATCTTTCTGTATTTTGCAGACTTGTTCTATGACTCTATCCTAGTTTAATTTCATCGTCTGATTAGATGACTTAGATGATAGTATCTATTTATAATACTCCATAATTTTTTtGGTTTAACAACAAAATAGAGGGAGAATCCTTACATTGAAAATGTCTGACAATATATACTCGAGAATGTTGTAGTTCTTGAACAGAATAGAAATATTCCAGACTGACGTGATGATATACCACTCCTAATTTCCTATTTCTTCCAATACGTGAAATAATTAACGGTGTGTATTTTGAATAATGGGAATGGAGTGGTTGGgTGGGGGGGTAAAGCTTCTTGGGGCATGGGAATTTTTTACAGCCAGTTTATGTCATGTTAAAGAGGCTATCTGGCTGAATTTTTTATAACTGAACTTGCTAGTGAAAGTAAGATAGTTATTGCCCTGAAACTTTACCTGCCTTGTAGCCTACAAAATTTGTATTTGGCCATTGTTTACTCTCAGTGGTTTTTTTCAAGATACCATGGTGTTTGCCGTGTAGGAACTTAATATTTTTGTCACCATGGACGTGAAACTCCCATATGCTACTGGTAGGAGTTTTACTTGATTTGACTTTTGAGGAGTTTTAGAAAAAAaCAAGTACAAAGGAATCCTATTTCGTCTTTCATTTTGCTTACTGCTTCTTCTGCTAGTTTACTTTGCAACAAGTTTCTTTACAATGTTGGATTGTTGTTTATGTTCATTGACCATTGGATTGAACACACGGGCATGTAGGGGCACCATTTTTCTTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATTGAGAAGATGCGCAGTGAGCTGAGGTCTGTTTTACTGAACCTCGGTTTATAGTAAATGTATACTAGCTTCAAATTTAGACATTAACTTGTACTCTCTTAAATTAATCTTATTTGTGCAAAGACCTTTGACTACAATGTAGGTATGAAATTGACAAAGTCACTGCTGGACAGCGATTAGACTTGAATCTTGAAAGAGGGTAAGCATTACTTTTTCATGTAAAAGAAGCATGTCAAGTCAGTTTGTTAGTGTAGAGCACATTTTGGTTTAATTTTACATTTTCTTACAAGTTCTATTGCTCATAAATGCAGGAGGATTCGGGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAACAAACTTGATCGGGTAAGACCAACCACTTGTGAAGAGGATGTTGGACAATTAAATAAAATGTTTTTtCTTTAATAAGTTGCAGAAAAACATATTTATTTTGTAGGTATATAGTTTATAGAGGTTAACCTGCAGTTTCAAAGATGGTTTTAAAACTTAAGAGCTTATCTAACATGAGTTATGTTGCTCATATAAAACTCATCAAACTCTTAGGAGGTGTTTAGCCTTCCAACTTCATATGAATGTCGGTATTAGAATACTCCCAACTCCACCAACTTCAACATTATTCTTTTTAATCTTTCCACATCTTCTCCGTTTTCTCTCTTTAATTTTtCCTTACTTTCCTAACACTAACTTCTTAGCTCCAAACTTAAGAATTCAACCCAACACGAAGTAAATATAGACTTTGACTTGTGAAGTATTAACACCAGCAAGCTGCAAACTCCTTGAAACTATGTTATATTATTTTACTTGGGAGAGCTAAAACTAATCACATTCCAAACATTAATTGTTGTTCATCAACATTTCAGGAAATTCATGGTCTGAGGGCACAGCTAGAAGCTGCAAAATACGATGTAATAAAATACTGCATTGGAACGCTCGTTTCCATTTCTGCTGTTGGTCTGGCTGTACTTCGCATCTTAATGTAAACATTTGAAGTCAGCTGAAGTTCTGATAGAGATTCGAAATCATAACTGGTTTGGGATTCATCCCGAATTTGACAAGGTGACATTTATTTCTATTTTTtCTTTAACCATATTTTAGAGAGGATTCTTGGAAGTTCAGTTATTTTCTCCGAGAGAGTTTCCATTTATTATTTTGTTTTCTCATGGAAATGGATCTCGACGTAGCCATTTGAATTGTACTTAATACTTGTTTCAGATGATGATAGTGATAATAAACATTGTTGTAAAGACTTTCTTTTGGTTTGATGA

mRNA sequence

TGTGTGTTTGAACCGTCCGTTTTTTAGTTGTTCGTATCATCGTCGGAGGAAAAGCTCAAGAATTTGAGGCGTCTTCTTCCCTTCCATTTCTTCCCAATTTCTTTGTTTCATCGCGAAGCAACCGCGAAATTTCCACGCCGTTCCTCCTTTTTCACTATTGGTGGCTGGGATCATCTTCATCGCTGTTCTTCCCTACAAAAAGGCTTTTTTTCCTCCATATTTTTTCCTCAATCCATTCTGAAATTCCAACACCTTAGTTCCTCAATCGATTTTCGATCCATTTTCACCCGAGATTTCTCCGTATACAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGACAATTGGTGGCCAATTCAGGTTTACGAAGGCTTGGAGTTTCGAATGTGTCTTCATTTGAAAGCTCAATCTTCGACCATTCAGCAAATAATTTGTCGGCATCCATCTCCTTGATTTCTCGGTACAGACACTATGAATGTAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACATTAGCCCTAGTTAGAAAATTGGAAGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATTACTGCTGCCATTACTGAAGTGCTAAATGACAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCTTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATTGAGAAGATGCGCAGTGAGCTGAGACCTTTGACTACAATGTAGGTATGAAATTGACAAAGTCACTGCTGGACAGCGATTAGACTTGAATCTTGAAAGAGGGAGGATTCGGGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAACAAACTTGATCGGGAAATTCATGGTCTGAGGGCACAGCTAGAAGCTGCAAAATACGATGTAATAAAATACTGCATTGGAACGCTCGTTTCCATTTCTGCTGTTGGTCTGGCTGTACTTCGCATCTTAATGTAAACATTTGAAGTCAGCTGAAGTTCTGATAGAGATTCGAAATCATAACTGGTTTGGGATTCATCCCGAATTTGACAAGGTGACATTTATTTCTATTTTTTCTTTAACCATATTTTAGAGAGGATTCTTGGAAGTTCAGTTATTTTCTCCGAGAGAGTTTCCATTTATTATTTTGTTTTCTCATGGAAATGGATCTCGACGTAGCCATTTGAATTGTACTTAATACTTGTTTCAGATGATGATAGTGATAATAAACATTGTTGTAAAGACTTTCTTTTGGTTTGATGA

Coding sequence (CDS)

ATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGACAATTGGTGGCCAATTCAGGTTTACGAAGGCTTGGAGTTTCGAATGTGTCTTCATTTGAAAGCTCAATCTTCGACCATTCAGCAAATAATTTGTCGGCATCCATCTCCTTGATTTCTCGGTACAGACACTATGAATGTAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACATTAGCCCTAGTTAGAAAATTGGAAGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATTACTGCTGCCATTACTGAAGTGCTAAATGACAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCTTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATTGAGAAGATGCGCAGTGAGCTGAGACCTTTGACTACAATGTAG

Protein sequence

MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRPLTTM*

Homology

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BLAST of Cucsa.201180.3 vs. TrEMBL
Match: A0A0A0KZG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043920 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.3e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI
Sbjct: 10  MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 69

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE
Sbjct: 70  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 129

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR
Sbjct: 130 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 178

[Close]

BLAST of Cucsa.201180.3 vs. TrEMBL
Match: M5VQZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010752mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.8e-57
Identity = 125/169 (73.96%), Postives = 136/169 (80.47%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAA AACKRVGQL  NSG    G    +          A+ ++ S SL   YRH +CR I
Sbjct: 1   MAAAAACKRVGQLGTNSGFGLSGFGGPA----------ASKVAVSPSL--EYRHLDCRLI 60

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVR+LEGQGVPS  AEAITAAITEVLNDSLEN+S+SFVSKGE
Sbjct: 61  SQLVKSNGKRLFLVDTLALVRRLEGQGVPSKHAEAITAAITEVLNDSLENVSNSFVSKGE 120

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQK EMIQ+SNLSKFKSE+QS+QGHHFSLL HETEKLRNDIEKMRSELR
Sbjct: 121 MQKTEMIQESNLSKFKSEIQSAQGHHFSLLQHETEKLRNDIEKMRSELR 157

[Close]

BLAST of Cucsa.201180.3 vs. TrEMBL
Match: I3SJ98_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-51
Identity = 124/167 (74.25%), Postives = 129/167 (77.25%), Query Frame = 1


Query: 4   GAACKRVGQLVANSGLRRLGVSNV-SSFESSIFDHSANNLSASISLISRYRHYECRQISQ 63
           G  CKRV QL    G R   VS V SSFE  I     N LSAS   +S  RH     IS+
Sbjct: 2   GVICKRVKQLARFGGFR---VSKVQSSFERPI----CNPLSASSPSVSGTRH-----ISE 61

Query: 64  LVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQ 123
           LVKSNGK LFLVDTLALVR+LEGQGVPS QAEAITAAIT VLNDSLEN+S S VSKGEMQ
Sbjct: 62  LVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLVSKGEMQ 121

Query: 124 KIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           K EMIQ+SNLSKFKSEVQSSQGHHFSLL HETEKLRNDIEKMRSELR
Sbjct: 122 KTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELR 156

[Close]

BLAST of Cucsa.201180.3 vs. TrEMBL
Match: G7LD03_MEDTR (FMP32-like protein OS=Medicago truncatula GN=MTR_8g076260 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-49
Identity = 118/171 (69.01%), Postives = 130/171 (76.02%), Query Frame = 1


Query: 5   AACKRVGQLVANSGLRRLGVSNVSS------FESSIFDHSANNLSASISLISRYRHYECR 64
           A C+ + QL   SGLR LG+S ++        ++SIFD     LS S S    +      
Sbjct: 3   AICRHMRQL---SGLRELGISRIAQSSSSLQIQTSIFDPY---LSFSASTTRSFSQ---- 62

Query: 65  QISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSK 124
             SQLVKSNGK LFLVDTLALVR+LEGQGVPS QAEAITAAITEVLNDSLEN+S + VSK
Sbjct: 63  --SQLVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITEVLNDSLENVSQALVSK 122

Query: 125 GEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           GEMQK EMIQ+SNLSKFKSEVQSSQGHHFSLL HETEKLRNDIEKMRSELR
Sbjct: 123 GEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELR 161

[Close]

BLAST of Cucsa.201180.3 vs. TrEMBL
Match: A0A061DFD9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000257 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 119/178 (66.85%), Postives = 133/178 (74.72%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSN---------VSSFESSIFDHSANNLSASISLISR 60
           MAA AACKRVGQ+    G+   GVS          VS  +++ F  S   LSAS +  SR
Sbjct: 1   MAAVAACKRVGQIGTTLGMIG-GVSRFRGFVTPIVVSPLDTAAFPSSGIRLSASSASFSR 60

Query: 61  YRHYECRQISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENI 120
                CRQ+SQLVKSNGKRLFLVDTLALVR+LE +G+PS QAEAITAAITEVLNDSLEN+
Sbjct: 61  -----CRQMSQLVKSNGKRLFLVDTLALVRRLEAEGLPSKQAEAITAAITEVLNDSLENV 120

Query: 121 SHSFVSKGEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           S S VSK EMQK EMIQ+SNLSK KS+V SSQ +HFSLL HETEKL NDIEKMRSELR
Sbjct: 121 SLSVVSKAEMQKSEMIQESNLSKLKSDVHSSQENHFSLLQHETEKLWNDIEKMRSELR 172

[Close]

BLAST of Cucsa.201180.3 vs. TAIR10
Match: AT2G16460.1 (AT2G16460.1 Protein of unknown function (DUF1640))

HSP 1 Score: 184.1 bits (466), Expect = 7.3e-47
Identity = 99/139 (71.22%), Postives = 113/139 (81.29%), Query Frame = 1


Query: 31  ESSIFDHSANNLSASISLISRYRHYECRQISQLVKSNGKRLFLVDTLALVRKLEGQGVPS 90
           +S+I       L +S+ L+ R R +  RQ S+L K+NG+R FLVDTLALVR LE QGVPS
Sbjct: 13  QSAITLAKPRGLGSSLGLLDR-RPFPYRQFSELTKANGRRAFLVDTLALVRSLEAQGVPS 72

Query: 91  NQAEAITAAITEVLNDSLENISHSFVSKGEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLL 150
            QAEAIT+AITEVLNDSLEN+S SFVSK EMQKIEMIQDSNLSKFKSEV+SSQ HHF++L
Sbjct: 73  KQAEAITSAITEVLNDSLENVSESFVSKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVL 132

Query: 151 GHETEKLRNDIEKMRSELR 170
             ETEKLR DIEKMRSELR
Sbjct: 133 QRETEKLRGDIEKMRSELR 150

[Close]

BLAST of Cucsa.201180.3 vs. TAIR10
Match: AT3G51090.1 (AT3G51090.1 Protein of unknown function (DUF1640))

HSP 1 Score: 179.1 bits (453), Expect = 2.4e-45
Identity = 101/171 (59.06%), Postives = 120/171 (70.18%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLIS--RYRHYECR 60
           MAA A   R+ +L   S    L       + +  FD +    S+S SL+S   +R +  R
Sbjct: 48  MAAYANYLRLARLGGTSSGVNLSTLRSFGYSNPAFDKTQEFRSSSSSLVSYSSFRQFHAR 107

Query: 61  QISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSK 120
            ISQL+K+NGKRLFLVDTLALVR LE QG+PS QAEAIT AITEVLNDSL  +S   VSK
Sbjct: 108 FISQLIKTNGKRLFLVDTLALVRSLEAQGLPSKQAEAITGAITEVLNDSLGVVSQLVVSK 167

Query: 121 GEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           GEMQK EM Q+SNLSKFKSE+ SS  HHFSLL HE EKLRNDIE++RS++R
Sbjct: 168 GEMQKAEMTQESNLSKFKSEINSSLDHHFSLLQHENEKLRNDIERIRSDIR 218

[Close]

BLAST of Cucsa.201180.3 vs. NCBI nr
Match: gi|778690649|ref|XP_011653145.1| (PREDICTED: protein FMP32, mitochondrial [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 7.6e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI
Sbjct: 10  MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 69

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE
Sbjct: 70  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 129

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR
Sbjct: 130 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 178

[Close]

BLAST of Cucsa.201180.3 vs. NCBI nr
Match: gi|659107514|ref|XP_008453714.1| (PREDICTED: protein FMP32, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-85
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANN SASISLISRYRHYECRQI
Sbjct: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNFSASISLISRYRHYECRQI 60

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE
Sbjct: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR
Sbjct: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 169

[Close]

BLAST of Cucsa.201180.3 vs. NCBI nr
Match: gi|659107512|ref|XP_008453713.1| (PREDICTED: protein FMP32, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-85
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANN SASISLISRYRHYECRQI
Sbjct: 10  MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNFSASISLISRYRHYECRQI 69

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE
Sbjct: 70  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 129

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR
Sbjct: 130 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 178

[Close]

BLAST of Cucsa.201180.3 vs. NCBI nr
Match: gi|595806823|ref|XP_007202505.1| (hypothetical protein PRUPE_ppa010752mg [Prunus persica])

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-56
Identity = 125/169 (73.96%), Postives = 136/169 (80.47%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAA AACKRVGQL  NSG    G    +          A+ ++ S SL   YRH +CR I
Sbjct: 1   MAAAAACKRVGQLGTNSGFGLSGFGGPA----------ASKVAVSPSL--EYRHLDCRLI 60

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVR+LEGQGVPS  AEAITAAITEVLNDSLEN+S+SFVSKGE
Sbjct: 61  SQLVKSNGKRLFLVDTLALVRRLEGQGVPSKHAEAITAAITEVLNDSLENVSNSFVSKGE 120

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQK EMIQ+SNLSKFKSE+QS+QGHHFSLL HETEKLRNDIEKMRSELR
Sbjct: 121 MQKTEMIQESNLSKFKSEIQSAQGHHFSLLQHETEKLRNDIEKMRSELR 157

[Close]

BLAST of Cucsa.201180.3 vs. NCBI nr
Match: gi|645273238|ref|XP_008241782.1| (PREDICTED: protein FMP32, mitochondrial [Prunus mume])

HSP 1 Score: 226.1 bits (575), Expect = 4.8e-56
Identity = 124/169 (73.37%), Postives = 135/169 (79.88%), Query Frame = 1


Query: 1   MAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQI 60
           MAA AACKRVGQL  NSG    G    +          A+ ++ S SL   YRH +CR  
Sbjct: 1   MAAAAACKRVGQLGTNSGFGLSGFGGPA----------ASKVTVSPSL--EYRHLDCRLT 60

Query: 61  SQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGE 120
           SQLVKSNGKRLFLVDTLALVR+LEGQGVPS  AEAITAAITEVLNDSLEN+S+SFVSKGE
Sbjct: 61  SQLVKSNGKRLFLVDTLALVRRLEGQGVPSKHAEAITAAITEVLNDSLENVSNSFVSKGE 120

Query: 121 MQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 170
           MQK EMIQ+SNLSKFKSE+QS+QGHHFSLL HETEKLRNDIEKMRSELR
Sbjct: 121 MQKTEMIQESNLSKFKSEIQSAQGHHFSLLQHETEKLRNDIEKMRSELR 157

The following BLAST results are available for this feature:

BLAST of Cucsa.201180.3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZG0_CUCSA	5.3e-86	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043920 PE=4 SV=1	[more]
M5VQZ4_PRUPE	8.8e-57	73.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010752mg PE=4 SV=1	[more]
I3SJ98_LOTJA	4.2e-51	74.25	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
G7LD03_MEDTR	3.0e-49	69.01	FMP32-like protein OS=Medicago truncatula GN=MTR_8g076260 PE=4 SV=1	[more]
A0A061DFD9_THECC	2.0e-48	66.85	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000257 PE=4 SV=1	[more]

BLAST of Cucsa.201180.3 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16460.1	7.3e-47	71.22	Protein of unknown function (DUF1640)	[more]
AT3G51090.1	2.4e-45	59.06	Protein of unknown function (DUF1640)	[more]

BLAST of Cucsa.201180.3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778690649\|ref\|XP_011653145.1\|	7.6e-86	100.00	PREDICTED: protein FMP32, mitochondrial [Cucumis sativus]	[more]
gi\|659107514\|ref\|XP_008453714.1\|	2.2e-85	99.41	PREDICTED: protein FMP32, mitochondrial-like isoform X2 [Cucumis melo]	[more]
gi\|659107512\|ref\|XP_008453713.1\|	2.2e-85	99.41	PREDICTED: protein FMP32, mitochondrial-like isoform X1 [Cucumis melo]	[more]
gi\|595806823\|ref\|XP_007202505.1\|	1.3e-56	73.96	hypothetical protein PRUPE_ppa010752mg [Prunus persica]	[more]
gi\|645273238\|ref\|XP_008241782.1\|	4.8e-56	73.37	PREDICTED: protein FMP32, mitochondrial [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR024461	DUF1640

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.201180	Cucsa.201180	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.201180.3	Cucsa.201180.3-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.201180.3.five_prime_UTR.1	Cucsa.201180.3.five_prime_UTR.1	five_prime_UTR
Cucsa.201180.3.five_prime_UTR.2	Cucsa.201180.3.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.201180.3.CDS.1	Cucsa.201180.3.CDS.1	CDS
Cucsa.201180.3.CDS.2	Cucsa.201180.3.CDS.2	CDS
Cucsa.201180.3.CDS.3	Cucsa.201180.3.CDS.3	CDS
Cucsa.201180.3.CDS.4	Cucsa.201180.3.CDS.4	CDS
Cucsa.201180.3.CDS.5	Cucsa.201180.3.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.201180.3.three_prime_UTR.1	Cucsa.201180.3.three_prime_UTR.1	three_prime_UTR
Cucsa.201180.3.three_prime_UTR.2	Cucsa.201180.3.three_prime_UTR.2	three_prime_UTR
Cucsa.201180.3.three_prime_UTR.3	Cucsa.201180.3.three_prime_UTR.3	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024461	Coiled-coil domain-containing protein 90-like	PFAM	PF07798	DUF1640	coord: 74..169 score: 1.0
None	No IPR available	PANTHER	PTHR14360	UNCHARACTERIZED	coord: 26..169 score: 6.9
None	No IPR available	PANTHER	PTHR14360:SF1	PROTEIN FMP32, MITOCHONDRIAL	coord: 26..169 score: 6.9