Cucsa.163190.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGTAATTGCCACCATGGGCCTCCTGGCTCTTACCCGCCGTAACTGGATTACCACCACTGCCCTTGTTTCTTCCCTCTCCGGCGAACTCAAACAGCCTCGGATTCTACCTTTCCGAACTCTCCACCGTTCACCGCCGGCATTCCGGATTCCTTCTTTCTCCTCTAGCCGCGTTTCGTCTCCACTCGCAGTGTCCAGCGACGTTTTGCATGATGCTGGCGCAACAGCGGCTGTTCTCATCGGAGCTTACTCGCTTGTTCGCGGATTCGACAATCTCACCCGGCGGAATTTGATTCAGCAGGTTCGTCGTCAAATTCATATTCTCTTCCTCGATTGCATATGCAACTTATTTTGGTTATAGTAGTGAGCTAAGTATATGCGGTCGAGTGGAGATCTGGATAGTACATTTGGAAATGGTTAATTGGGCAAAACAATATTACTTTTTAGTTTGTGCCTTAGAAAGGTATATTTCCATTTCCACAAATGGAAGAGTGATGTATTGTAATGAAGAAATGCATTTCTGGTTTTCCTTTCTCAAAATGAAAACGTGGATTAAATTTTCTTGGAAACCGCTAACCTAAATACAGAAATTCTGGCAAGATTCTCTACATTTTGAGTAAATCGAAAACCTCACGCTTCTCGCTTGATTTGGTTGACAAATTTGGGTATAAACAGAAATTGCATGTAATTAGTAAGTAGTTCATTGCATTTAGCTAGCAGCAAAACTATGTACAGAACCTGAATCGGGTAGTTTTACAAAAATAGAATCATAGTTCCCCGTATCCCTTTTTGAAATTTTTTGGAGGCATCACTGCCAAGGTAACTGATTGGTTTTAAGTATCTTCCTCTTAGATTTGATCCTCTAAGGTATACGCTTTTGCCCTGTTAATGGATCTGTTCAGGGCCTTTTACTTCTCACTTTCTTTGAAGTTCATTAACATCTGGGTTTCAGTTGATAATCAGATTTTCTTTGATCTACTTCCTCTTGGCCTTGTGTTTAACGTTCTGTTTATTGGGTTTCAAGGATGTCGATTACAATTGTTTTGGATATCAATTTTTTTATAATACCAACAATTAATTTGTCACTCCTCTCTGCACATCAACTAATTTTCATTTTATATAAGTAGTAGTTCATTAGTAATTTTGTGGCCATGGAAGAAAAGCTTATAGAAAGTATTGTTTTCTTTGTTACTTGTGATCATGAATAACATCAATATTGTTCTCTTTTGGTAACTGGCATTCAATGAAACAGAATTTGAGCAGAAAACTTGTCCACATATTGTCCGGATTGCTTTTCACAATGTCTTGGCCTATATTCAGGTAATTCTAAGATTGCTTTCCCATGCAGAGAAGTTTACTCGCCTCTTTTATTTTGCATACCAATGATTTGAATCTGGTGCTTCTCTTTCTCAACCACTTCAGTTTAACGTTTTGATTCTAGAATAGCACCTCAACGGGGGCTCGGTACTTTGCTTCAATTGTTCCTACTGTGAATTGCTTGAGGCTTGTTATCAATGGCCTCTCATTAACCAAAGATGAAGGACTTTTGAAATCACTTACTCGGGAAGGAAAACCAGAGTAAAGTTCCATCTATCTACTACCATCCTTTTCAAAATCCTTAAACTCCTTAAATTATATAACCTCAGTTTATAACCTCTTTAATCTAAATCTACAGGGAGTTGCTGAGAGGGCCTCTATACTATGTTCTAATACTGATTTTGTCGGCTGTTATCTTCTGGCGTGAATCTCCAGTTGGTTTGATCTCATTGGGAATGATGTGTGGAGGAGATGGTAAAATTTTCGCCTTCTTTTTAATTATATTCCCATTACTACTTCTATTATTAGAACTGCTAACTTGTTTTGATTTAACTAACTGCAGGTATTGCTGATATAATGGGAAGAAAGTTTGGGTCCAAAAGGCTTCCTTATAATCAGGAGAAGAGTTGGGTTGGTAGCATTTCAATGTTCATCTTTGGATTTTGTGTTTCCATTGGGTGAGTTATTTTTGCTTTACTTCCTTGTCATCATGATAATAATTTTAATTTTGAAATGGTTAAAATTACAATAAGAAATTGTCATAAATAACCCTATTTAGTTTTCTTTTCACCTTTTACTAAATTACTGCACAATGTGTAACGTTAGGGAGTGATTTTGACAGTTTTGGCACTCTTATTTGTGAAAGTAACTCTGAGAAATGTTTTGTTGCTATGTGTGTAGAATGTTGTACTATTTCTCGGTTCTTGGATATTTAGAGCTGGATTGGGTGAAGGCAGTGCAAAATGTTGCTTTAATTTCTCTGGTGGCAACTGTGGTGGAGTCACTTCCCAGTGCAGGAGTTGTAGATGATAATATATCAGTACCACTGGTCAGTATGGCTGCAGCCTTTCTGACTTTCTGTTTTTAATAGGACTTTTCCCTCTGCCTCATCACATCTCTCTTTCTAATTTCACTTATTTAAAATCATTTTTTTAAAAAAaTAAAaCTGTAATTGCACCTTCAAATTTTCACTCTCAAACTTCTACCCCATATTAAAATTGGATTCTAATGTTTACTATGATTGTGGAAGAAATCAGATCCTAAATGATAAAAATTGAACCCTAAAATTTATACCATTATACCAGTTTTTGTGCAGACTGAGATGATGCAGATTATCAATCCATGAATTCAAACTTTAAGAATGAAAGAGAAAAaGAAAAAAAaGTATTGCCAACTTTACTGTTGGGCAATGGACACATCCTTTTACAACTTATTAACATGGCATTATGCACTTCTATTTTCTCTACTTGTCTTTATATGAAAATACTTAACGAGAATTCGTATCCTAGAAAAGCAGACTTTTGTCTTCTTTTTTGTCCATTTT TGTGTAATTGCCACCATGGGCCTCCTGGCTCTTACCCGCCGTAACTGGATTACCACCACTGCCCTTGTTTCTTCCCTCTCCGGCGAACTCAAACAGCCTCGGATTCTACCTTTCCGAACTCTCCACCGTTCACCGCCGGCATTCCGGATTCCTTCTTTCTCCTCTAGCCGCGTTTCGTCTCCACTCGCAGTGTCCAGCGACGTTTTGCATGATGCTGGCGCAACAGCGGCTGTTCTCATCGGAGCTTACTCGCTTGTTCGCGGATTCGACAATCTCACCCGGCGGAATTTGATTCAGCAGAATTTGAGCAGAAAACTTGTCCACATATTGTCCGGATTGCTTTTCACAATGTCTTGGCCTATATTCAGCACCTCAACGGGGGCTCGGTACTTTGCTTCAATTGTTCCTACTGTGAATTGCTTGAGGCTTGTTATCAATGGCCTCTCATTAACCAAAGATGAAGGACTTTTGAAATCACTTACTCGGGAAGGAAAACCAGAGGAGTTGCTGAGAGGGCCTCTATACTATGTTCTAATACTGATTTTGTCGGCTGTTATCTTCTGGCGTGAATCTCCAGTTGGTTTGATCTCATTGGGAATGATGTGTGGAGGAGATGGTATTGCTGATATAATGGGAAGAAAGTTTGGGTCCAAAAGGCTTCCTTATAATCAGGAGAAGAGTTGGGTTGGTAGCATTTCAATGTTCATCTTTGGATTTTGTGTTTCCATTGGAATGTTGTACTATTTCTCGGTTCTTGGATATTTAGAGCTGGATTGGGTGAAGGCAGTGCAAAATGTTGCTTTAATTTCTCTGGTGGCAACTGTGGTGGAGTCACTTCCCAGTGCAGGAGTTGTAGATGATAATATATCAGTACCACTGGTCAGTATGGCTGCAGCCTTTCTGACTTTCTGTTTTTAATAGGACTTTTCCCTCTGCCTCATCACATCTCTCTTTCTAATTTCACttatttaaaatcatttttttaaaaaaataaaaCtgtaattgcaccttcaaattttcactctcaaacttctaccccatattaaaattggattctaatgtttactatgattgtggaagaaatcagatcctaaatgataaaaattgaaccctaaaatttataccattataccagtttttGTGCAGACTGAGATGATGCAGATTATCAATCCATGAATTCAAACTTTAAGAATGAAAGAGAAAAAGAAAAAAAAGTATTGCCAACTTTACTGTTGGGCAATGGACACATCCTTTTACAACTTATTAACATGGCATTATGCACTTCTATTTTCTCTACTTGTCTTTATATGAAAATACTTAACGAGAATTCGTATCCTAGAAAAGCAGACTTTTGTCTTCTTTTTTGTCCATTTT ATGGGCCTCCTGGCTCTTACCCGCCGTAACTGGATTACCACCACTGCCCTTGTTTCTTCCCTCTCCGGCGAACTCAAACAGCCTCGGATTCTACCTTTCCGAACTCTCCACCGTTCACCGCCGGCATTCCGGATTCCTTCTTTCTCCTCTAGCCGCGTTTCGTCTCCACTCGCAGTGTCCAGCGACGTTTTGCATGATGCTGGCGCAACAGCGGCTGTTCTCATCGGAGCTTACTCGCTTGTTCGCGGATTCGACAATCTCACCCGGCGGAATTTGATTCAGCAGAATTTGAGCAGAAAACTTGTCCACATATTGTCCGGATTGCTTTTCACAATGTCTTGGCCTATATTCAGCACCTCAACGGGGGCTCGGTACTTTGCTTCAATTGTTCCTACTGTGAATTGCTTGAGGCTTGTTATCAATGGCCTCTCATTAACCAAAGATGAAGGACTTTTGAAATCACTTACTCGGGAAGGAAAACCAGAGGAGTTGCTGAGAGGGCCTCTATACTATGTTCTAATACTGATTTTGTCGGCTGTTATCTTCTGGCGTGAATCTCCAGTTGGTTTGATCTCATTGGGAATGATGTGTGGAGGAGATGGTATTGCTGATATAATGGGAAGAAAGTTTGGGTCCAAAAGGCTTCCTTATAATCAGGAGAAGAGTTGGGTTGGTAGCATTTCAATGTTCATCTTTGGATTTTGTGTTTCCATTGGAATGTTGTACTATTTCTCGGTTCTTGGATATTTAGAGCTGGATTGGGTGAAGGCAGTGCAAAATGTTGCTTTAATTTCTCTGGTGGCAACTGTGGTGGAGTCACTTCCCAGTGCAGGAGTTGTAGATGATAATATATCAGTACCACTGGTCAGTATGGCTGCAGCCTTTCTGACTTTCTGTTTTTAA MGLLALTRRNWITTTALVSSLSGELKQPRILPFRTLHRSPPAFRIPSFSSSRVSSPLAVSSDVLHDAGATAAVLIGAYSLVRGFDNLTRRNLIQQNLSRKLVHILSGLLFTMSWPIFSTSTGARYFASIVPTVNCLRLVINGLSLTKDEGLLKSLTREGKPEELLRGPLYYVLILILSAVIFWRESPVGLISLGMMCGGDGIADIMGRKFGSKRLPYNQEKSWVGSISMFIFGFCVSIGMLYYFSVLGYLELDWVKAVQNVALISLVATVVESLPSAGVVDDNISVPLVSMAAAFLTFCF*
BLAST of Cucsa.163190.1 vs. Swiss-Prot
Match: PHYK1_SOYBN (Probable phytol kinase 1, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 8.1e-96 Identity = 175/259 (67.57%), Postives = 208/259 (80.31%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. Swiss-Prot
Match: PHYK1_ARATH (Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana GN=VTE5 PE=1 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 5.4e-92 Identity = 167/248 (67.34%), Postives = 207/248 (83.47%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. Swiss-Prot
Match: PHYK1_ORYSJ (Probable phytol kinase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0670700 PE=2 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.6e-83 Identity = 147/235 (62.55%), Postives = 188/235 (80.00%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. Swiss-Prot
Match: PHYK_MAIZE (Probable phytol kinase, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.9e-82 Identity = 159/278 (57.19%), Postives = 201/278 (72.30%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. Swiss-Prot
Match: PHYK_WHEAT (Probable phytol kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 7.4e-81 Identity = 144/245 (58.78%), Postives = 188/245 (76.73%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TrEMBL
Match: A0A0A0LMM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G385070 PE=4 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 1.7e-164 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TrEMBL
Match: M5X1V6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009034mg PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 8.1e-103 Identity = 193/282 (68.44%), Postives = 235/282 (83.33%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TrEMBL
Match: A0A067EWJ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022218mg PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.8e-100 Identity = 182/247 (73.68%), Postives = 218/247 (88.26%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TrEMBL
Match: V4VBX2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032240mg PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.8e-100 Identity = 182/247 (73.68%), Postives = 218/247 (88.26%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TrEMBL
Match: B9HUX4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s23890g PE=4 SV=2) HSP 1 Score: 372.5 bits (955), Expect = 4.9e-100 Identity = 189/274 (68.98%), Postives = 217/274 (79.20%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TAIR10
Match: AT5G04490.1 (AT5G04490.1 vitamin E pathway gene 5) HSP 1 Score: 339.0 bits (868), Expect = 3.1e-93 Identity = 167/248 (67.34%), Postives = 207/248 (83.47%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. TAIR10
Match: AT5G58560.1 (AT5G58560.1 Phosphatidate cytidylyltransferase family protein) HSP 1 Score: 209.1 bits (531), Expect = 3.7e-54 Identity = 108/273 (39.56%), Postives = 165/273 (60.44%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. NCBI nr
Match: gi|778672753|ref|XP_011649863.1| (PREDICTED: probable phytol kinase 1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 586.6 bits (1511), Expect = 2.4e-164 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. NCBI nr
Match: gi|659113424|ref|XP_008456566.1| (PREDICTED: probable phytol kinase 1, chloroplastic [Cucumis melo]) HSP 1 Score: 553.1 bits (1424), Expect = 2.9e-154 Identity = 283/301 (94.02%), Postives = 293/301 (97.34%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. NCBI nr
Match: gi|778672756|ref|XP_011649864.1| (PREDICTED: probable phytol kinase 1, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 407.1 bits (1045), Expect = 2.6e-110 Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. NCBI nr
Match: gi|645224087|ref|XP_008218940.1| (PREDICTED: probable phytol kinase 1, chloroplastic isoform X1 [Prunus mume]) HSP 1 Score: 382.5 bits (981), Expect = 6.9e-103 Identity = 192/275 (69.82%), Postives = 232/275 (84.36%), Query Frame = 1
BLAST of Cucsa.163190.1 vs. NCBI nr
Match: gi|596013906|ref|XP_007218720.1| (hypothetical protein PRUPE_ppa009034mg [Prunus persica]) HSP 1 Score: 381.7 bits (979), Expect = 1.2e-102 Identity = 193/282 (68.44%), Postives = 235/282 (83.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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