Cucsa.153480.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACACTTGATTGAGGTCATTACTGTCCAACCAAGAAAGAGAGCAAACTGAAGGCATGAGATAGTTGGATGCTATCATCCTTTGAAAATCATCAGAAGTACTAGACTACTGTTTGGCATAATCGATAAGAGGATGTCGATTCTCTTTGGACTTCCATAAAGCTGCAAAACCCTTCTTATTCAAAGGGGAAGAAGAAGGTAAGTCTCTGATAGGATTAATCCTATCAGTCTCTTGATTGGGATATCACAAAATGGAAGAATCTAGAGACAAAAATTGTGTATGGTCAGTCATCAGTGGTGACAGCACTGACAGGTCGTTGAACGCACAACTTCTTTGTTTGAAAGCAGATATTTGAGGGTGTTCTCTAGCATCCTTCTGATGGAATGTAGGAAGCTAAGAAATTTTAGCTTTGTTAGTGGCTATTTCAAGAACCAAGTTCAATTGATTTTTTTGGCAAATATTAAATTTAGCTACCTAGCATGTATAAGGTGGCTATTGAAACTAGAGAGGAACTCGAGTTCAATTGACGGGAAATTATTCCTGAATGTGCTGATTTCCTAGTGAGAATTTCTAATCGAGGAGATAATGGCACATGCTTTAGCAAACCTTGTGGCTCCTTCGTTCACATTATGTGCAATGGTTGGAACTCTGATCCTTTCTCTGTCATCCTCTCCTTCCCTATTTCATACCCTCTGTTAAATTTTCTCTACTTATGACCACAAATATGAAATTTGTTTATTCAGTATTACATTACCCTCTTGGCTTGTTTGTTACTTGGTTTCTGTAATTTTCTTGTGTCTTAATTTCTTGGTATCTTTTTGCATCTAGAGTGGCTTATGCCCAATTATATGGGTCAATTTTTTAATTGCCTTCTTTTGATTTTAGATTGTTCTGCTTCTTTTAAGCCGTGTCTGAAGTTATTTGCATATTCTGCATTTACCCATGGGGGAGGACGATAAGCAGGTACAATTTTGAGTTTCTATGCTGATAAACAAATTTATGTTTCTAAATTGTTTTAAGAATTATAGTTGAATGACTTGAAATTTGAAAATTTAAAATCACCATCTACAACTTGATTTAAAATAAATCCTGGATCTTTGAAGGGAAACCAATTTTACAACAATACAAAATTGAAAAAGAAAACAAAGAAAACAAACTTTAAAAATAATTGAAACATAATTTTATAAAAAGGGCCTTCTTTTTGTATCTCCTTGGATTATTTCATGTCAATGTAATAATTTCTTATCCAAAAAAAAAGAAAGAAATTGAAGCATAATTTTCTTAGTGGAAGCTATTCTTCTAAACAATTTCCTAACTGCCTTTTCATTTCTTTTACAGGATAGACAAAAGATGGCAAATCTTCATCTAAGATCAGAAATGATTAGTATGGGACATCCACCTATGGCAAACCAGCCTCATGTAATCAATCAGTCTCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAAGCCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGGCAAATCTTCTGGCTCAACCTCAGGCCATGCAGCAATCCCAGATGATCATGAATCATTCTCTGCCACCTATGATGAGTGGCAACTATAAGGTGTGGGCACATCCACAAGCCCCTTTGGATCCCAACAAGAAGTACCGCAACTTCCCAAAACCTAGCTATGGAAATATGAAGCAATCAAGATCGGGTCGAGGCAATTGGAAGGGAAAAGGCGTTGGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTATTGGGTTCCATAAGTGGTCCAAATAATGCTGCAGGTTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTAGAAAGTTTTACTCTAAAAAGAAGTTTGGCAATAGGTTTGCACCTTATGCACCTCGGAATACCACTTCTTTTTTAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTAGTCCTGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCACCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTACGGGGGTCTGAGAATAAGGTGGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACACTTGGAGGTAGAGCGCAGATTGGACCATGACTTGAGCCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGATGATGTGAATGAGGAAGTAGTGGAGAATGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACGACACCAAGATGTTGATGTTGATTCTAAAGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGCGGGTGAAGATTTCAAGAGAGGGAAAGTGGTTGAAGAGAAATACATAGTGAATGATGAAATGGTGAAGGAATCAAATGAACAGATTCCAGAACACTGTGTGACAAAAGATGAAGAATTTAAGGGTGAACTTATTTCGAGGAAGGTAAATGAATGTGACAATATGAATGAAAACTTGGGTAATATTCTGCACACGGATTCAGGGGTTGGAAGTGTAGCCATGGCCAATGATGAAGCAGAACAGAACAGAGTTGTACCTGTAAAAATAGCTTTAGATGTAAAGGAAGGATGTGAAGAAACAAGGGAGGATTCTGTATCAGGAAACTGACTGTTTGTAAGGATATGGCTCCATCGAGAGAAGTGCTTGCATAAGCGATTAATTTTGTGTTAATGTAACCCACTTCTCTGATGAGGCATTTTCTTGGAATTTTATCGTCACTGCTGCAGTATTCCTGATCAATATTTTCTTTAGAATCTCTCTAGTTGGAAACGGCTGATGTTTCTTGATCAATTCAGCTTCTTGTTTCACTTAACTCTCAAGGCTTTTGTGTTAGATTCTAGGTTCTATATTTTAAATTCTTTTTTCTTTTTTGTCTTTCTTGTGTAATATACTCCGTGGTTAATATGATCGTACAGCCTGCAAAAGATGCTTGTTTGGGTTTTATCCCT AAAAACACTTGATTGAGGTCATTACTGTCCAACCAAGAAAGAGAGCAAACTGAAGGCATGAGATAGTTGGATGCTATCATCCTTTGAAAATCATCAGAAGTACTAGACTACTGTTTGGCATAATCGATAAGAGGATGTCGATTCTCTTTGGACTTCCATAAAGCTGCAAAACCCTTCTTATTCAAAGGGGAAGAAGAAGATTGTTCTGCTTCTTTTAAGCCGTGTCTGAAGTTATTTGCATATTCTGCATTTACCCATGGGGGAGGACGATAAGCAGGATAGACAAAAGATGGCAAATCTTCATCTAAGATCAGAAATGATTAGTATGGGACATCCACCTATGGCAAACCAGCCTCATGTAATCAATCAGTCTCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAAGCCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGGCAAATCTTCTGGCTCAACCTCAGGCCATGCAGCAATCCCAGATGATCATGAATCATTCTCTGCCACCTATGATGAGTGGCAACTATAAGGTGTGGGCACATCCACAAGCCCCTTTGGATCCCAACAAGAAGTACCGCAACTTCCCAAAACCTAGCTATGGAAATATGAAGCAATCAAGATCGGGTCGAGGCAATTGGAAGGGAAAAGGCGTTGGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTATTGGGTTCCATAAGTGGTCCAAATAATGCTGCAGGTTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTAGAAAGTTTTACTCTAAAAAGAAGTTTGGCAATAGGTTTGCACCTTATGCACCTCGGAATACCACTTCTTTTTTAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTAGTCCTGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCACCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTACGGGGGTCTGAGAATAAGGTGGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACACTTGGAGGTAGAGCGCAGATTGGACCATGACTTGAGCCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGATGATGTGAATGAGGAAGTAGTGGAGAATGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACGACACCAAGATGTTGATGTTGATTCTAAAGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGCGGGTGAAGATTTCAAGAGAGGGAAAGTGGTTGAAGAGAAATACATAGTGAATGATGAAATGGTGAAGGAATCAAATGAACAGATTCCAGAACACTGTGTGACAAAAGATGAAGAATTTAAGGGTGAACTTATTTCGAGGAAGGTAAATGAATGTGACAATATGAATGAAAACTTGGGTAATATTCTGCACACGGATTCAGGGGTTGGAAGTGTAGCCATGGCCAATGATGAAGCAGAACAGAACAGAGTTGTACCTGTAAAAATAGCTTTAGATGTAAAGGAAGGATGTGAAGAAACAAGGGAGGATTCTGTATCAGGAAACTGACTGTTTGTAAGGATATGGCTCCATCGAGAGAAGTGCTTGCATAAGCGATTAATTTTGTGTTAATGTAACCCACTTCTCTGATGAGGCATTTTCTTGGAATTTTATCGTCACTGCTGCAGTATTCCTGATCAATATTTTCTTTAGAATCTCTCTAGTTGGAAACGGCTGATGTTTCTTGATCAATTCAGCTTCTTGTTTCACTTAACTCTCAAGGCTTTTGTGTTAGATTCTAGGTTCTATATTTTAAATTCTTTTTTCTTTTTTGTCTTTCTTGTGTAATATACTCCGTGGTTAATATGATCGTACAGCCTGCAAAAGATGCTTGTTTGGGTTTTATCCCT ATGGGGGAGGACGATAAGCAGGATAGACAAAAGATGGCAAATCTTCATCTAAGATCAGAAATGATTAGTATGGGACATCCACCTATGGCAAACCAGCCTCATGTAATCAATCAGTCTCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAAGCCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGGCAAATCTTCTGGCTCAACCTCAGGCCATGCAGCAATCCCAGATGATCATGAATCATTCTCTGCCACCTATGATGAGTGGCAACTATAAGGTGTGGGCACATCCACAAGCCCCTTTGGATCCCAACAAGAAGTACCGCAACTTCCCAAAACCTAGCTATGGAAATATGAAGCAATCAAGATCGGGTCGAGGCAATTGGAAGGGAAAAGGCGTTGGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTATTGGGTTCCATAAGTGGTCCAAATAATGCTGCAGGTTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTAGAAAGTTTTACTCTAAAAAGAAGTTTGGCAATAGGTTTGCACCTTATGCACCTCGGAATACCACTTCTTTTTTAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTAGTCCTGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCACCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTACGGGGGTCTGAGAATAAGGTGGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACACTTGGAGGTAGAGCGCAGATTGGACCATGACTTGAGCCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGATGATGTGAATGAGGAAGTAGTGGAGAATGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACGACACCAAGATGTTGATGTTGATTCTAAAGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGCGGGTGAAGATTTCAAGAGAGGGAAAGTGGTTGAAGAGAAATACATAGTGAATGATGAAATGGTGAAGGAATCAAATGAACAGATTCCAGAACACTGTGTGACAAAAGATGAAGAATTTAAGGGTGAACTTATTTCGAGGAAGGTAAATGAATGTGACAATATGAATGAAAACTTGGGTAATATTCTGCACACGGATTCAGGGGTTGGAAGTGTAGCCATGGCCAATGATGAAGCAGAACAGAACAGAGTTGTACCTGTAAAAATAGCTTTAGATGTAAAGGAAGGATGTGAAGAAACAAGGGAGGATTCTGTATCAGGAAACTGA MGEDDKQDRQKMANLHLRSEMISMGHPPMANQPHVINQSQVMNQPQSQVMNQPQVINQPQFLNQSLMNHSQIMSQSQAINQANLLAQPQAMQQSQMIMNHSLPPMMSGNYKVWAHPQAPLDPNKKYRNFPKPSYGNMKQSRSGRGNWKGKGVGDKRINNRRMEKPLLGSISGPNNAAGYQPPSLHELQSQNRLRARKFYSKKKFGNRFAPYAPRNTTSFLIRAKKSGGIASLVSPSPVTPAVLPTPMFSPSREALGDMAKEEWGVDGYGSMKGLIRLRGSENKVEVQDEEEEEVGGGSSDSDVEEHLEVERRLDHDLSRFEMIYQNYGVEYNNCLENRVDDQDSHIAQLEEENLTLKERLFLMERELVDLRRKLQLLEGQNPAIDDVNEEVVENVSENESDGGLEMEYVSEIRRHQDVDVDSKEEDEEVLEIEGGEKCAGEDFKRGKVVEEKYIVNDEMVKESNEQIPEHCVTKDEEFKGELISRKVNECDNMNENLGNILHTDSGVGSVAMANDEAEQNRVVPVKIALDVKEGCEETREDSVSGN*
BLAST of Cucsa.153480.1 vs. TrEMBL
Match: A0A0A0L0I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286320 PE=4 SV=1) HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00 Identity = 544/546 (99.63%), Postives = 545/546 (99.82%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. TrEMBL
Match: A0A0A0KZ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286340 PE=4 SV=1) HSP 1 Score: 660.2 bits (1702), Expect = 2.2e-186 Identity = 340/428 (79.44%), Postives = 365/428 (85.28%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. TrEMBL
Match: A0A151RX10_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031322 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 7.0e-137 Identity = 285/539 (52.88%), Postives = 364/539 (67.53%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. TrEMBL
Match: I1NJ98_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G244700 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-132 Identity = 289/528 (54.73%), Postives = 348/528 (65.91%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. TrEMBL
Match: A0A0B2R002_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032868 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-132 Identity = 289/528 (54.73%), Postives = 348/528 (65.91%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. TAIR10
Match: AT5G19900.1 (AT5G19900.1 PRLI-interacting factor, putative) HSP 1 Score: 386.7 bits (992), Expect = 2.3e-107 Identity = 249/517 (48.16%), Postives = 308/517 (59.57%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. NCBI nr
Match: gi|778693053|ref|XP_011653569.1| (PREDICTED: uncharacterized protein LOC101211007 [Cucumis sativus]) HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00 Identity = 544/546 (99.63%), Postives = 545/546 (99.82%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. NCBI nr
Match: gi|659097701|ref|XP_008449767.1| (PREDICTED: uncharacterized protein LOC103491553 [Cucumis melo]) HSP 1 Score: 1069.3 bits (2764), Expect = 2.2e-309 Identity = 532/546 (97.44%), Postives = 535/546 (97.99%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. NCBI nr
Match: gi|778693057|ref|XP_004142245.2| (PREDICTED: uncharacterized protein LOC101217509 [Cucumis sativus]) HSP 1 Score: 660.2 bits (1702), Expect = 3.1e-186 Identity = 340/428 (79.44%), Postives = 365/428 (85.28%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. NCBI nr
Match: gi|659097693|ref|XP_008449762.1| (PREDICTED: uncharacterized protein LOC103491551 [Cucumis melo]) HSP 1 Score: 657.5 bits (1695), Expect = 2.0e-185 Identity = 337/428 (78.74%), Postives = 365/428 (85.28%), Query Frame = 1
BLAST of Cucsa.153480.1 vs. NCBI nr
Match: gi|1021568446|ref|XP_016175447.1| (PREDICTED: uncharacterized protein LOC107618036 [Arachis ipaensis]) HSP 1 Score: 498.8 bits (1283), Expect = 1.2e-137 Identity = 302/532 (56.77%), Postives = 357/532 (67.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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