Cucsa.153250.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATGATTAATTGTGTATAATCGATCTTTAAAACGTTTCATTAATTAGTATGTTCAAATTTGGCATGCATACTTTTGGGAAAAAAATTAGTCTTCCATATGCTAACTTATTAAGCATTTTGTTATTTATAACATTTTTATTATGAATTTTGAAAATATATCCGGTTCGTTGCTTGAAAATTATTGTTATTATTATTTAATCAGTTTTCGTCTTAGACAAAACTTAAAAAAATAATTGAAAGTAGGGAGACCAAAAATTAAACAGAGTATAGAATTAAAAATTGAAGGAACTTTAAGGTGTGACACTAGAAATAGTAATTTTTAATCTAATTTAAGTTAGACAATGTATTTGCATCAAGTTCATTGTGAATAGAGTTTGTTAAGAACAAGAGTATGAAAATAGTATTAATTATGTTTTAATATAATTTTAAATTGAAAACTTTGTAGAATTTATATAACAGAATCCAAAAACAACTTTTCTAAACAAAAGTTTGAAGATTACACCAAATCTAAAACATAAAACAGAATGTAAATGATGTATCAAAGTCGTCTCCAGCGAAAGCTAAATTTTTGGGAAGATCCATAAAAAGATGATGATAGTAATGATAAAGATGATGATGGTGATAAATGTTAGGGGTAAAGAGAGATTTTTTTGGGTTTCAAACGGGAAACGCGACCAATGAACTACAGCGGAGAAGGGGAAGGTGAGAAAGATAAGGGTGATTTACATTTGTCAAATCTTCTTCAACGACAAATCAACAATCAAAACTAACCATTTCCAAATCTAACCCTCCAAATTTCCATCACCCATCACCGCCATTTCTCATTTTTCTGTTCCTTTTCCTCAATCAATTGCTTCACCAACTGAAAGTGCTCATTTTTTGAGAAAGAACCATCAACCTTCCAAATCCCAGTTTCCATCCATGGCGGGATCTCATCTGGGTCTAATCTTTTTCACCTTCTTCGTCTTCTTGACCTCTATTCCTTCGCTTTCTGCAGCAGGATCTGATGCTCCCACTGTCTATGATGTTCTCCCCAAATATGGCCTTCCCAGTGGCCTTTTACCTGACTCCGTCCTCGACTACACTCTCTCCTCTGATGGTCAATTTGTCGTTCATTTGGCCAAACCTTGTTACATCCATTTCGATTACTTGGTTTATTACCATAAAACCATTACTGGGAAGCTCGAATATGGGTCCATCACTGATCTCGACGGTATCGAGGTTCAGAAGTTGTTTCTCTGGTTCGATGTGAAGGAAATCAGAGTTGATTTGCCGCCTTCTGATAATATCTACTTCCAAGTTGGGTTTATCAACAAGAAGCTCGACATCGATCAATTTAAGACTATCCACTCATGTCAGGATAATGCTTTGGCCACTTCTCTTGGCTCCTGGAAACGGATTCTTGAGGTATATTCTCAGCCGCCCCTCCAGCTTCTGATTGTTATTTGCATCTCTTTTTCTTTATCCGTTTTGTGTTCTTTAGAATCTTACATGGGTCTGTTATCTTTACTGATTATCATAAACTCATGGGTATGTGTTGCCTGCTGTTGATCGCTATGTTTTGTTCGTGCTTCGAATTTTATGATTCGATATTGCTATTCTATTGGACGATAATTTGTTCAAGAAGTGTGATAGATTATGTGATGTTTGAAGAAATCTTGTATTGAAAACATGATGGCATGTATGAACTCAAATGTAAGTAGGAAGCAGTTCAAGATAATTTAGACTTTGACCGCTATTTTTTCGTTAACTTTGTTTTGTAAAATTTATCTTTCACACACTTGTGGAATATTTCTTTTGACGTGTTGATTTTTGGTGAGGGAATCATCCTTTGTCATGAAGGTATCATCATGTTAGGCAGCCTTTGTCTTCAAGTTATCATTATGCAGGAGGAGTATAGAGTTTTTAAAAGAAGGTTCAACCTAATTCATACACGTGGTTTGTAAATCTATCCTGTAATGAAAAATTCATGAAGTGTCATTCCGAGTATAATTCTCCGGATAAAGTATCAATTACTATCTTAAACGTTCTTGGTTCAATTCTCACTTAGAAAATGAAAGTGTTTGTGAATGCACAGAATCTTTCATGGTAGAACTTTTGTTTTCCTCTTTTAAGTAGGGACGAAAGTATTTATTAACCAAAAGAGAACGGACATAAAAGAGGAGTCGGGATATCACCCAGATGACCAAGGGAACCAAACCATTTGGATTGTCCATCTCATTTGCATTCCTGTGCTAAACCTCTGAACAACAATTAGGACAATAGGGATCCTCGTCCCTCATTTTCCTCGGTTCTCAAATGTTCCGAGATGCCAATTCAACGTTTTAAACATTTAATTAATGTTTTCTTCTCTTCATATGAAGAAAGTGAAGAATGAAAATTGAAACCGATTCATCTGGGTTCTATCAAGGTTGTTTCAATTAAGTTTTGGTGTCAGTGGTCATTTCATACAAACAGCTTAATGATCTATTCGTTCGTTTATATTATTTGAACTTTTATTCTACATCTTTGTTGAGTTTGGATTATATTTAATAGTTATTGCCTTATTGGGCCTGCGGTTGTTTCATGTCACAGCTTTAGTGAACAGATGACCAGATTAAGCTATACTGCCTTCATTTTTTCACCTTTATTCTGTTAATTAATGCTTTAATACATCAATTAGAAGTTACTAAGAGTTGAAGCTGAGTTGATTTACCTTCATGAGCACATATGCTACTGTTTTGAATTCTGCTACTGTAGTCCTCCAATGAACACAGTTATTCTGGCTGCTTGATATTCGAATATGATTGTTGTTTTGGCCTCTCTGTTTGTCACTTATTTCTTAGCTTCTCGAACATGTTGCTGTTAATTTGTATTGGTCTTTGGGATTAGCTACTTATTCGAGGGAATATTATGCAAGATGTGCTCTATTACAGTGTAATTTTAGATGACAGACCAATATGCTAACCTCATTTGTTGAGTATGAGTTAAAAGAATACACTACAGAGATTGAATATGTTTTTGGAGAGCAGTTGTATCATGCTAACACTTTTTCATTGGTACTCACAGCTCCCGCCGCCGATAGGTGACATCCAGATGCTAATCACCGAGTAGCTCGTCTTCACATGTCCAAGTTCTTGAAGTTCTTCTTGCTGCATTATCGAAATGAGCAGAAGAAGAAATTTAGGAGTTTTTAGGTATATGGTCTCAGTTTAGACACCAAAATGCCAAACGTCTATCTTGGAAGACCTATGATATGATTGTTAATATTTGATGTGTCTTTCAGTTTCATCCTCAAAAAGAAATGCCCAAAACATTGGCATTTGAGGTTTCTTATAAACTCAATGCATATGAATGAAACGGTATATT CTAATGATTAATTGTGTATAATCGATCTTTAAAACGTTTCATTAATTAGTATGTTCAAATTTGGCATGCATACTTTTGGGAAAAAAATTAGTCTTCCATATGCTAACTTATTAAGCATTTTGTTATTTATAACATTTTTATTATGAATTTTGAAAATATATCCGGTTCGTTGCTTGAAAATTATTGTTATTATTATTTAATCAGTTTTCGTCTTAGACAAAACTTAAAAAAATAATTGAAAGTAGGGAGACCAAAAATTAAACAGAGTATAGAATTAAAAATTGAAGGAACTTTAAGGTGTGACACTAGAAATAGTAATTTTTAATCTAATTTAAGTTAGACAATGTATTTGCATCAAGTTCATTGTGAATAGAGTTTGTTAAGAACAAGAGTATGAAAATAGtattaattatgttttaatataattttaaattGAAAACTTTGTAGAATTTATATAACAGAATCCAAAAACAACTTTTCTAAACAAAAGTTTGAAGATTACACCAAATCTAAAACATAAAACAGAATGTAAATGATGTATCAAAGTCGTCTCCAGCGAAAGCTAAATTTTTGGGAAGATCCATAAAAAgatgatgatagtaatgataaagatgatgatggtgatAAATGTTAGGGGTAAAGAGAGATTTTTTTGGGTTTCAAACGGGAAACGCGACCAATGAACTACAGCGGAGAAGGGGAAGGTGAGAAAGATAAGGGTGATTTACATTTGTCAAATCTTCTTCAACGACAAATCAACAATCAAAACTAACCATTTCCAAATCTAACCCTCCAAATTTCCATCACCCATCACCGCCATTTCTCATTTTTCTGTTCCTTTTCCTCAATCAATTGCTTCACCAACTGAAAGTGCTCATTTTTTGAGAAAGAACCATCAACCTTCCAAATCCCAGTTTCCATCCATGGCGGGATCTCATCTGGGTCTAATCTTTTTCACCTTCTTCGTCTTCTTGACCTCTATTCCTTCGCTTTCTGCAGCAGGATCTGATGCTCCCACTGTCTATGATGTTCTCCCCAAATATGGCCTTCCCAGTGGCCTTTTACCTGACTCCGTCCTCGACTACACTCTCTCCTCTGATGGTCAATTTGTCGTTCATTTGGCCAAACCTTGTTACATCCATTTCGATTACTTGGTTTATTACCATAAAACCATTACTGGGAAGCTCGAATATGGGTCCATCACTGATCTCGACGGTATCGAGGTTCAGAAGTTGTTTCTCTGGTTCGATGTGAAGGAAATCAGAGTTGATTTGCCGCCTTCTGATAATATCTACTTCCAAGTTGGGTTTATCAACAAGAAGCTCGACATCGATCAATTTAAGACTATCCACTCATGTCAGGATAATGCTTTGGCCACTTCTCTTGGCTCCTGGAAACGGATTCTTGAGCTCCCGCCGCCGATAGGTGACATCCAGATGCTAATCACCGAGTAGCTCGTCTTCACATGTCCAAGTTCTTGAAGTTCTTCTTGCTGCATTATCGAAATGAGCAGAAGAAGAAATTTAGGAGTTTTTAGGTATATGGTCTCAGTTTAGACACCAAAATGCCAAACGTCTATCTTGGAAGACCTATGATATGATTGTTAATATTTGATGTGTCTTTCAGTTTCATCCTCAAAAAGAAATGCCCAAAACATTGGCATTTGAGGTTTCTTATAAACTCAATGCATATGAATGAAACGGTATATT ATGGCGGGATCTCATCTGGGTCTAATCTTTTTCACCTTCTTCGTCTTCTTGACCTCTATTCCTTCGCTTTCTGCAGCAGGATCTGATGCTCCCACTGTCTATGATGTTCTCCCCAAATATGGCCTTCCCAGTGGCCTTTTACCTGACTCCGTCCTCGACTACACTCTCTCCTCTGATGGTCAATTTGTCGTTCATTTGGCCAAACCTTGTTACATCCATTTCGATTACTTGGTTTATTACCATAAAACCATTACTGGGAAGCTCGAATATGGGTCCATCACTGATCTCGACGGTATCGAGGTTCAGAAGTTGTTTCTCTGGTTCGATGTGAAGGAAATCAGAGTTGATTTGCCGCCTTCTGATAATATCTACTTCCAAGTTGGGTTTATCAACAAGAAGCTCGACATCGATCAATTTAAGACTATCCACTCATGTCAGGATAATGCTTTGGCCACTTCTCTTGGCTCCTGGAAACGGATTCTTGAGCTCCCGCCGCCGATAGGTGACATCCAGATGCTAATCACCGAGTAG MAGSHLGLIFFTFFVFLTSIPSLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFVVHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTIHSCQDNALATSLGSWKRILELPPPIGDIQMLITE*
BLAST of Cucsa.153250.1 vs. TrEMBL
Match: A0A0A0KX35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280550 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 5.1e-97 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TrEMBL
Match: A0A061GS45_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040152 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.5e-59 Identity = 114/177 (64.41%), Postives = 139/177 (78.53%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TrEMBL
Match: M5W0C7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012214mg PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 6.8e-57 Identity = 111/174 (63.79%), Postives = 137/174 (78.74%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TrEMBL
Match: A0A067JTM4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22853 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 9.8e-56 Identity = 113/178 (63.48%), Postives = 134/178 (75.28%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TrEMBL
Match: A0A0D2R1N7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G094100 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.7e-55 Identity = 112/176 (63.64%), Postives = 135/176 (76.70%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TAIR10
Match: AT5G19860.1 (AT5G19860.1 Protein of unknown function, DUF538) HSP 1 Score: 211.1 bits (536), Expect = 5.7e-55 Identity = 106/174 (60.92%), Postives = 133/174 (76.44%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TAIR10
Match: AT1G55265.1 (AT1G55265.1 Protein of unknown function, DUF538) HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26 Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538) HSP 1 Score: 105.5 bits (262), Expect = 3.4e-23 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538) HSP 1 Score: 104.8 bits (260), Expect = 5.7e-23 Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19 Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. NCBI nr
Match: gi|449448818|ref|XP_004142162.1| (PREDICTED: uncharacterized protein LOC101215998 [Cucumis sativus]) HSP 1 Score: 361.7 bits (927), Expect = 7.4e-97 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. NCBI nr
Match: gi|659097761|ref|XP_008449800.1| (PREDICTED: uncharacterized protein LOC103491580 [Cucumis melo]) HSP 1 Score: 355.5 bits (911), Expect = 5.3e-95 Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. NCBI nr
Match: gi|590582776|ref|XP_007014717.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59 Identity = 114/177 (64.41%), Postives = 139/177 (78.53%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. NCBI nr
Match: gi|1009123859|ref|XP_015878764.1| (PREDICTED: uncharacterized protein LOC107415023 [Ziziphus jujuba]) HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58 Identity = 113/174 (64.94%), Postives = 141/174 (81.03%), Query Frame = 1
BLAST of Cucsa.153250.1 vs. NCBI nr
Match: gi|595830043|ref|XP_007205988.1| (hypothetical protein PRUPE_ppa012214mg [Prunus persica]) HSP 1 Score: 228.4 bits (581), Expect = 9.7e-57 Identity = 111/174 (63.79%), Postives = 137/174 (78.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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