Cucsa.147570.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCGTTAATGGAGTTTCTGCTGTGATTCTCGATCTCGATGGAACCCTTTTGGACACTGGTATATAATTTTCTTCTTTGAATTTAGGTATTTATCTTTTTTCTTGCTATAGTTGTATGTGTATATGAAGTAACACTATTGTATTGTGTTCAGAGACGGCGACAAAAGATGTGTTGAAGGAATTTTTGGGAAAGTATGGGAAAGTTTGGGAGAAGAAGAGAGAAGAGGAGAAGAGATTGGGGATGACCCAGAAAGAATATGCAGCTGCAGTTGTTAGGGATTATGGCCTTCCATTGACACCAGATCAATTTATTCAAGAAATTACTCCTATGTACAGGGAAAAGTAAGATTCCTGGTCTTATGTTTTGTTTGTTCCTTTGATGGGCATCGTTCTTTTTTTTTtCATTTtATGTTGAAATACTCTTCAGGTGGCCTTCTGTTAAAGCACTTCCTGGTGCTGATCGTCTTATCAAACATCTTTACTCTCATAAGATCCCGTTCGGGCTCGCTTCAAATTCTTCAAGTGAATATATCCATGCTAAAATTTCTTGTATGAAAGGTAGTTTCTGCTTCATATGGCTAATTAATTCATTCATTTGTCTAATTGATAATTTGTAATCTCTAACTCCAGTTTCATGTTAAAAAaCAAAAAAaCCTTAAGGGCTGGGGAGAGAGCTCCCCCACCCAAGAAAGTAATTAACAAAAAGCTTTCCAATATAATTATTTTGATAAAGTTACTGTGGTGCAATGGATAACGGATCCCTTTAGAATTTAATTATCAGGGTATTAATTGAGGAGATCGTGCTATCCACCTCACAAAGCCAAAGGATTAATATATTTAGTGATGGTCCTTTTCTGATGCACATCTTTTGCTTGGTCTGGGGTTTAGCTTTAGCATACTCCTTTGTCTTCCTTTTCCAGTTATATGATATGATTAAGTTCCCCCCACTTTGTAGGGTCATATTCTTCTGATTCCTTTTCAGAAAAGCACATGTATATGTAACAAATGAAATTATTTTGTAACAGTTCTCACTCTTTTTGACATTCTTTTCTTTTGAGGTTGTCTGTGATGTGCGGAACATATCATGCTTATTTTGACTAATTATACCTAATGTCGTTTtACTTTTTTTtCTCAGTAATTGCATATCTTACAGCTTTCTTCAATCTTCAGCTATCATAACTCATTCTGAGATGGACTAATTTAGGAAGTAATAATGGCTTTCTAATTCCCTATTGGTCGTTGGAGTGAACAATATTCTAAGTGGAGTAGTGGGAGTTGCATTGATTGTTTGCTTTGACTTCTTTACTTTGATGGTCCTTTTTTGTCTTCATTTAAACTTCATGTTCTCTCGTAACATAACATTAGCATTTTCTTACTGGCCAGCTTGTTCCCATATTTTGGTTTCAAATTGCATGATATCTCTTCTTGTGTGCAGGTTGGAAGGACTGGTTTTCTGTGATTCTTGGTAGTGACCAGGTTATTGAAGGGAAACCTGCTCCTTATCTGTAAAGTCTTTTTCTTTTGCACGAACCATCTTAATGAAGAGAAAAAATTGTCTCATTCCATCTTTTAGCCATTTTCATGAGATAAACTGGTGTACACTAATCTCTCAAAGAATACTCAACTGCTCAATAATCTCAAAAGGAAGACTTCAGCCCTATTTATAGGAAAAAaCTAAAGATTACAACCTAGCTTTACCCACATTACCGTAAGGGTAAAAGTTATAAAATGGAAGCTAAGACAGAGTATAACTCTTACCTAGAAGAAAATGGTTAAACAAAAGAGTAAAAATACTTAACTAAAGAAACTTAAAGAAGTGCCCAAGAACTCCCAAGAAATACAAGATTAAAAGGAAATACAACAAGATTGCCTAAAAGACATTACATCATGAACTCTGTTGAAAGTTTAAAAGCTTACATTTAGTCACGTGGAAATGGGAGTCTAGGAACATTTTTATGTCCAATTATTGCATTCTGGAATTCAAGTCATACATATTTAATACTTTCAATGTAAGTTAATAATAAGATTGTCTTGTGGATTATCGGTATCTTTGAAACCCAAATGCTAAAGGAAATGGTAACAATCAAATGAACATAGAATTTATCTTTGGCGCAATGAGTGATGGAATTAGCTAAATCCATGAAAAACGAAGGAAATGTCTGAAAATGAGAGAATAAAACTTTTAGTAAATTGCAAAAGAAAGTTGAAAATTGCTTCCAATCCATGCCTTTCGAAGCTTACTAAAGGAAaAAAAAaGGTTAACTGACAAACTAACTAAACTTTAGTAATGTGTTAATCTAAAAAGGTATGCTAGACTTCTAGTTAGTTAGCTATGGCGAACTACTTCTCCTAATTAATTTTTCGACTAATTTCCTTCAATTGTTAAGTGTATGTGGTTGATGTCACTTAAATTACGTGTTATTCTTTGACTCTATCTTCCTCTAAACTGTTTTTTTTTttAGATTTGAAGAGGCAGCAAAGAGAATGGGTGTAGATGCTTCTCATTGTTTAGTTATTGAAGATTCCTTGTAAGTTCGAAGTTCCTTTTTACTATAACTTTTTTtATAGAGAAAATACATAGTGTGGCAACTGCATCTCCGCCTTTTGCCTTTCTCTAAACAAGACATATTCCAACAGGGTTGGCGTCAAAGCAGCTAAAGCTGCTAAGATGAAGGTTGTAGCTGTCCCATCCCGTGGGGGAATTGAGTGCTCTTCCTTAGCAGATGAAGTGCTCAATTCCTTATTAGAATTTCAGCCTGAGCTGTGGGGTCTTCCCTTATTTGAAGACTGTATGAATCTGTTTATTTTtCTTGTATTTTATTTTATCAATAGTCTTTtATTTTCTAATCACCGTCTCAGTTTTTTTACATGATAATTTCAGGGGTAGATGGAACCTTACAAATTGATCCAATATATGTGAGCTCTCAATACATTAATACGTCCATGAGTGAAATCTCAGGTTTGTGAGTCTGTATTTCTCTCATCTGGGCTGTAATGAATGCATAATCTAATGAATTATGATTGGGGATAATCTGTTTTACAGTCATTCAAGTTTCAATCTTCAAATATTGTACTTCCAATATTTGTTAGCATGTGTTTTCTATCCCAAAACTAATTGGTAAGGAGAAAAGTGGCTTCATCTATCTTTTATAAACATTGTGAATTTTCTCTACTTTTCCAATGTGAGATGCTTAACCTGCCTCCTCAAAATGGTGCCTCTTTGAGTTGACAATTTTTGGTTGGATCAAAGTTCAAACACAGTTTGGGAGATAGCATATAATTAGATGATATAAAGTTTTATCTCAAAATCAAAAGGTAAGGAAAACAGGAACTTCATCAATCTCATAAACTCTTTCAATGTAGGATCTTCAACTTCTAGTCTTCAGTATCTTGTGGACCATAATTTGCCCCTTGGAATGGAATGATGGCCATAACTTAAGTTCAGATATTATTTTCTGACCAATTTTATACCGCTTTTCAAGCTTTTGGGGTTTCTAAAAGAATTGGAATAAACTTATGCGACATCTGCTTTCTAAATTGCTTGGTTTGACCACGGGATCTGAAAAGTTGTTCATGTGGTTGATTTGATTTTTCAGAATGTTGTAGATCATGATGAGTTTAATGCATGGTTTCAGAGGATGCATCAATACCTGACCAAGTTTTTGGAACATTCTTCGGTTGGGCTGGCACTGGCACGGCCTGGACCATCAAGGTTGTGGTTAACATCGGATGGAATTGCAGTTCATGTACAAAAAAGAaTAGGATCTGGGTACTTTACATTCCTCCATATTCAAAATTTATATCATTTCAAGTTTGAATTGGTTTTTGAGTTGCTTCCAATTACATATGATAACTCTATTCAATATTCAAGATTATCTAATGTTTTTTTTttCTTTCTCATTTTTGGCAGAAACTATGGTCAGTTGATAGCTGTGATAGCAAAATATTTGAGCAGCAAATGCAATTCATGCTTGTTGGCTACATCTGCAGATTGAATGGCAAGGTAAATATTAGAACAAATCTATAACAACGAGTAATATAAGATTTGTAACCAACACAATTTTTATGTACATGTACCTCAAGCTTCAATTGATCAAACTTATGACTGTAGGATCTTACAAATATGGATGTGAGAGAGATTGAAGAGTTCAAGTATATTGCCAAGACGTCACTTGACCGAACTATGTTTGTCAGCCATTCTTGCACATCTCTTACTGTAGAAGGAACTTCTAGCATTAATGGATGATATAGTTTGTAATCTACCAGATATCACTATGTTTCTTTGAAGCCATCATTCTGGTTCATAGCTTATGTTCTTCATGTGGAGAAAACGCAGTTAGTTCGGAATCATGTATCATCACTGGCTCAAATGATGTTTATTGTTATCATTCCTTTCTTTTCCAAGTAGATACTATTCCGATTACA ATGAGTTTCGTTAATGGAGTTTCTGCTGTGATTCTCGATCTCGATGGAACCCTTTTGGACACTGAGACGGCGACAAAAGATGTGTTGAAGGAATTTTTGGGAAAGTATGGGAAAGTTTGGGAGAAGAAGAGAGAAGAGGAGAAGAGATTGGGGATGACCCAGAAAGAATATGCAGCTGCAGTTGTTAGGGATTATGGCCTTCCATTGACACCAGATCAATTTATTCAAGAAATTACTCCTATGTACAGGGAAAAGTGGCCTTCTGTTAAAGCACTTCCTGGTGCTGATCGTCTTATCAAACATCTTTACTCTCATAAGATCCCGTTCGGGCTCGCTTCAAATTCTTCAAGTGAATATATCCATGCTAAAATTTCTTGTATGAAAGGTTGGAAGGACTGGTTTTCTGTGATTCTTGGTAGTGACCAGGTTATTGAAGGGAAACCTGCTCCTTATCTATTTGAAGAGGCAGCAAAGAGAATGGGTGTAGATGCTTCTCATTGTTTAGTTATTGAAGATTCCTTGGTTGGCGTCAAAGCAGCTAAAGCTGCTAAGATGAAGGTTGTAGCTGTCCCATCCCGTGGGGGAATTGAGTGCTCTTCCTTAGCAGATGAAGTGCTCAATTCCTTATTAGAATTTCAGCCTGAGCTGTGGGGTCTTCCCTTATTTGAAGACTGGGTAGATGGAACCTTACAAATTGATCCAATATATGTGAGCTCTCAATACATTAATACGTCCATGAGTGAAATCTCAGAGGATGCATCAATACCTGACCAAGTTTTTGGAACATTCTTCGGTTGGGCTGGCACTGGCACGGCCTGGACCATCAAGGTTGTGGTTAACATCGGATGGAATTGCAGTTCATGTACAAAAAAGAATAGGATCTGGAAACTATGGTCAGTTGATAGCTGTGATAGCAAAATATTTGAGCAGCAAATGCAATTCATGCTTGTTGGCTACATCTGCAGATTGAATGGCAAGGATCTTACAAATATGGATGTGAGAGAGATTGAAGAGTTCAAGTATATTGCCAAGACGTCACTTGACCGAACTATGTTTGTCAGCCATTCTTGCACATCTCTTACTGTAGAAGGAACTTCTAGCATTAATGGATGATATAGTTTGTAATCTACCAGATATCACTATGTTTCTTTGAAGCCATCATTCTGGTTCATAGCTTATGTTCTTCATGTGGAGAAAACGCAGTTAGTTCGGAATCATGTATCATCACTGGCTCAAATGATGTTTATTGTTATCATTCCTTTCTTTTCCAAGTAGATACTATTCCGATTACA ATGAGTTTCGTTAATGGAGTTTCTGCTGTGATTCTCGATCTCGATGGAACCCTTTTGGACACTGAGACGGCGACAAAAGATGTGTTGAAGGAATTTTTGGGAAAGTATGGGAAAGTTTGGGAGAAGAAGAGAGAAGAGGAGAAGAGATTGGGGATGACCCAGAAAGAATATGCAGCTGCAGTTGTTAGGGATTATGGCCTTCCATTGACACCAGATCAATTTATTCAAGAAATTACTCCTATGTACAGGGAAAAGTGGCCTTCTGTTAAAGCACTTCCTGGTGCTGATCGTCTTATCAAACATCTTTACTCTCATAAGATCCCGTTCGGGCTCGCTTCAAATTCTTCAAGTGAATATATCCATGCTAAAATTTCTTGTATGAAAGGTTGGAAGGACTGGTTTTCTGTGATTCTTGGTAGTGACCAGGTTATTGAAGGGAAACCTGCTCCTTATCTATTTGAAGAGGCAGCAAAGAGAATGGGTGTAGATGCTTCTCATTGTTTAGTTATTGAAGATTCCTTGGTTGGCGTCAAAGCAGCTAAAGCTGCTAAGATGAAGGTTGTAGCTGTCCCATCCCGTGGGGGAATTGAGTGCTCTTCCTTAGCAGATGAAGTGCTCAATTCCTTATTAGAATTTCAGCCTGAGCTGTGGGGTCTTCCCTTATTTGAAGACTGGGTAGATGGAACCTTACAAATTGATCCAATATATGTGAGCTCTCAATACATTAATACGTCCATGAGTGAAATCTCAGAGGATGCATCAATACCTGACCAAGTTTTTGGAACATTCTTCGGTTGGGCTGGCACTGGCACGGCCTGGACCATCAAGGTTGTGGTTAACATCGGATGGAATTGCAGTTCATGTACAAAAAAGAaTAGGATCTGGAAACTATGGTCAGTTGATAGCTGTGATAGCAAAATATTTGAGCAGCAAATGCAATTCATGCTTGTTGGCTACATCTGCAGATTGAATGGCAAGGATCTTACAAATATGGATGTGAGAGAGATTGAAGAGTTCAAGTATATTGCCAAGACGTCACTTGACCGAACTATGTTTGTCAGCCATTCTTGCACATCTCTTACTGTAGAAGGAACTTCTAGCATTAATGGATGA MSFVNGVSAVILDLDGTLLDTETATKDVLKEFLGKYGKVWEKKREEEKRLGMTQKEYAAAVVRDYGLPLTPDQFIQEITPMYREKWPSVKALPGADRLIKHLYSHKIPFGLASNSSSEYIHAKISCMKGWKDWFSVILGSDQVIEGKPAPYLFEEAAKRMGVDASHCLVIEDSLVGVKAAKAAKMKVVAVPSRGGIECSSLADEVLNSLLEFQPELWGLPLFEDWVDGTLQIDPIYVSSQYINTSMSEISEDASIPDQVFGTFFGWAGTGTAWTIKVVVNIGWNCSSCTKKNRIWKLWSVDSCDSKIFEQQMQFMLVGYICRLNGKDLTNMDVREIEEFKYIAKTSLDRTMFVSHSCTSLTVEGTSSING*
BLAST of Cucsa.147570.1 vs. Swiss-Prot
Match: FHYRK_ARATH (Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana GN=FHY PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 3.4e-67 Identity = 146/358 (40.78%), Postives = 216/358 (60.34%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. Swiss-Prot
Match: HDHD1_HUMAN (Pseudouridine-5'-phosphatase OS=Homo sapiens GN=PUDP PE=1 SV=3) HSP 1 Score: 129.0 bits (323), Expect = 1.1e-28 Identity = 89/224 (39.73%), Postives = 127/224 (56.70%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. Swiss-Prot
Match: GS1_DROME (Probable pseudouridine-5'-phosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 3.4e-27 Identity = 82/224 (36.61%), Postives = 130/224 (58.04%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. Swiss-Prot
Match: GPP1_ARATH ((DL)-glycerol-3-phosphatase 1 OS=Arabidopsis thaliana GN=GPP1 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 9.9e-27 Identity = 86/229 (37.55%), Postives = 130/229 (56.77%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. Swiss-Prot
Match: GPP2_ARATH ((DL)-glycerol-3-phosphatase 2 OS=Arabidopsis thaliana GN=GPP2 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.2e-26 Identity = 85/229 (37.12%), Postives = 129/229 (56.33%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TrEMBL
Match: A0A0A0K3S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048080 PE=4 SV=1) HSP 1 Score: 753.1 bits (1943), Expect = 1.7e-214 Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TrEMBL
Match: M5WMR0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006855mg PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.1e-112 Identity = 217/359 (60.45%), Postives = 264/359 (73.54%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TrEMBL
Match: K7M2J5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G291000 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 5.7e-106 Identity = 201/343 (58.60%), Postives = 259/343 (75.51%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TrEMBL
Match: I1LUM2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G210300 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 9.7e-106 Identity = 202/348 (58.05%), Postives = 259/348 (74.43%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TrEMBL
Match: A0A0B2R7L0_GLYSO (Pseudouridine-5'-monophosphatase OS=Glycine soja GN=glysoja_007670 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-105 Identity = 202/348 (58.05%), Postives = 259/348 (74.43%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TAIR10
Match: AT4G21470.1 (AT4G21470.1 riboflavin kinase/FMN hydrolase) HSP 1 Score: 256.9 bits (655), Expect = 1.9e-68 Identity = 146/358 (40.78%), Postives = 216/358 (60.34%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TAIR10
Match: AT4G25840.1 (AT4G25840.1 glycerol-3-phosphatase 1) HSP 1 Score: 122.5 bits (306), Expect = 5.6e-28 Identity = 86/229 (37.55%), Postives = 130/229 (56.77%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TAIR10
Match: AT5G57440.1 (AT5G57440.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27 Identity = 85/229 (37.12%), Postives = 129/229 (56.33%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TAIR10
Match: AT1G56500.1 (AT1G56500.1 haloacid dehalogenase-like hydrolase family protein) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-12 Identity = 53/188 (28.19%), Postives = 91/188 (48.40%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. TAIR10
Match: AT3G48420.1 (AT3G48420.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 66.6 bits (161), Expect = 3.6e-11 Identity = 57/204 (27.94%), Postives = 90/204 (44.12%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. NCBI nr
Match: gi|778724094|ref|XP_011658747.1| (PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Cucumis sativus]) HSP 1 Score: 753.1 bits (1943), Expect = 2.4e-214 Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. NCBI nr
Match: gi|659110594|ref|XP_008455308.1| (PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Cucumis melo]) HSP 1 Score: 714.1 bits (1842), Expect = 1.2e-202 Identity = 350/370 (94.59%), Postives = 359/370 (97.03%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. NCBI nr
Match: gi|645245509|ref|XP_008228913.1| (PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Prunus mume]) HSP 1 Score: 415.2 bits (1066), Expect = 1.2e-112 Identity = 218/359 (60.72%), Postives = 267/359 (74.37%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. NCBI nr
Match: gi|1009173769|ref|XP_015867989.1| (PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Ziziphus jujuba]) HSP 1 Score: 415.2 bits (1066), Expect = 1.2e-112 Identity = 221/358 (61.73%), Postives = 265/358 (74.02%), Query Frame = 1
BLAST of Cucsa.147570.1 vs. NCBI nr
Match: gi|595901459|ref|XP_007213883.1| (hypothetical protein PRUPE_ppa006855mg [Prunus persica]) HSP 1 Score: 412.9 bits (1060), Expect = 5.8e-112 Identity = 217/359 (60.45%), Postives = 264/359 (73.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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