Cucsa.119290.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.119290.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Eukaryotic translation initiation factor 3 subunit A, putative
Location	scaffold00998 : 1170208 .. 1171730 (-)
Sequence length	1072

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGTTCCTCTAATTACCATGCTCGTTCCAACAGCCTGCCGACGAGGCCTCACCCCCTCGTGACTGAGTGCGATGAGCACCTATGCCGTCTGAAGGCAATGGACTCGGCTCCATGGACGGCGTTCGGGATGGCAAACAAGCTAGCAGGACTGCAGGATTTACAGGAGTGCGTGAACAAGCTGCTGTTGCTGCGGCGGACGAGGGATGCCTTTGCGGCACATCGACGGGAGAAATGGGTGGATGAGGTGTTTGATGGATCGTTGAGATTGCTGGACTTGTGTAGCGCTTCTAAGGATGGTGTTATTCATACCAAGGAGTGTGTGAGGGAGTTACAATCATTGGTTAGGAGAAGATCGTCTTCTTGGTGTTGCGGAAATGGTGTTGCTAATCAGGTTTGTGTTTTCAACCTAACGCTCTCCCGCTCAAAGGTGGATGGGTTGTGTTAAATTTAGTTTCAAGAAAATATGTATGTATATATAGGGCCACGACTATAGATAGAAAGAGAGGAAGACGTTTTCCGGTTGGATTTTGTTGAAATTTCTGAGTTTTTACAATTTTATTCAATATTGGTTGATTTGAGTGCATGTCATTCAGTCGAGCCTACTTTTGCAAAAACAAATTTTCTATTGACATTTGTGGTTTTCAGATCAGTTTTCTATCAGTAAAATGATTTGAGAGCCACGAGAGATTCAAATATATAAACTCTTGGTGAATAGGTTATACTCCTTGTGATTTTTGAAAAATACAATCTTTACACAATCTTTCTTTCATTCAGGACAAATTTTGATACCATATTAAATTACCATAAAAACTAATAACACTTTTTAAATTTTTGATTTATAGGTGGAGAAATATTTAGCATCAAGAAAAGTAGTGAAAAGAGCCATCCAAAAGGCTTTAGCAAGCGTGAAGACTTATGGGGCAAGGCCAAGTTCAATCTCCATTAAAGACACCGAAACTATTGCTTTAATAACCCTATTATTCGACGTAGAAGTTGCAAGTGTGAATGTTTTTGAAGCACTTTTGAGCTATGTTTTGGGGAAGAAAGGAAAGGCCAAGGGTAGTGGTTGGGCGCTAGTTTCAAAGTTGATGCGCTCCAAACGTGTGCTTTTAACTGAGGACGGTGCAGAAGGAGAGGCAAACGAATTTGCCACCATAGATGCAGCAGTCGATGTGGTGGCGAGTAGATTAGCTTCTGATAGCAGCACGATCATAGGTGGTGGTGGCATAGAGAGCATGGGAGATCAGTTAGGAAAGTTGGAAGCATGTGTTCAAGATTTAGAAGGAGGATTGGAGGGTTTGTTTAGAAGATTGATAAGAAATAGGGTTTCATTATTGAATATTATCAATAACTAAGGATATGAGAGAATGTTAATTTTAAAGTTAATGGGATTCCATTGATGTGTGTATTTTTTAGGCCATATATGGAAGGTTTGTAGATTAATATAATTAATGCCAAATATTTGTGTGTATATATTTGTCTTGCATAAAGAAAAAAAAACAAAGCCGTATTTTCCTC

mRNA sequence

ATGGGAGGTTCCTCTAATTACCATGCTCGTTCCAACAGCCTGCCGACGAGGCCTCACCCCCTCGTGACTGAGTGCGATGAGCACCTATGCCGTCTGAAGGCAATGGACTCGGCTCCATGGACGGCGTTCGGGATGGCAAACAAGCTAGCAGGACTGCAGGATTTACAGGAGTGCGTGAACAAGCTGCTGTTGCTGCGGCGGACGAGGGATGCCTTTGCGGCACATCGACGGGAGAAATGGGTGGATGAGGTGTTTGATGGATCGTTGAGATTGCTGGACTTGTGTAGCGCTTCTAAGGATGGTGTTATTCATACCAAGGAGTGTGTGAGGGAGTTACAATCATTGGTTAGGAGAAGATCGTCTTCTTGGTGTTGCGGAAATGGTGTTGCTAATCAGGTGGAGAAATATTTAGCATCAAGAAAAGTAGTGAAAAGAGCCATCCAAAAGGCTTTAGCAAGCGTGAAGACTTATGGGGCAAGGCCAAGTTCAATCTCCATTAAAGACACCGAAACTATTGCTTTAATAACCCTATTATTCGACGTAGAAGTTGCAAGTGTGAATGTTTTTGAAGCACTTTTGAGCTATGTTTTGGGGAAGAAAGGAAAGGCCAAGGGTAGTGGTTGGGCGCTAGTTTCAAAGTTGATGCGCTCCAAACGTGTGCTTTTAACTGAGGACGGTGCAGAAGGAGAGGCAAACGAATTTGCCACCATAGATGCAGCAGTCGATGTGGTGGCGAGTAGATTAGCTTCTGATAGCAGCACGATCATAGGTGGTGGTGGCATAGAGAGCATGGGAGATCAGTTAGGAAAGTTGGAAGCATGTGTTCAAGATTTAGAAGGAGGATTGGAGGGTTTGTTTAGAAGATTGATAAGAAATAGGGTTTCATTATTGAATATTATCAATAACTAAGGATATGAGAGAATGTTAATTTTAAAGTTAATGGGATTCCATTGATGTGTGTATTTTTTAGGCCATATATGGAAGGTTTGTAGATTAATATAATTAATGCCAAATATTTGTGTGTATATATTTGTCTTGCATAAAGAAAAAAAAACAAAGCCGTATTTTCCTC

Coding sequence (CDS)

ATGGGAGGTTCCTCTAATTACCATGCTCGTTCCAACAGCCTGCCGACGAGGCCTCACCCCCTCGTGACTGAGTGCGATGAGCACCTATGCCGTCTGAAGGCAATGGACTCGGCTCCATGGACGGCGTTCGGGATGGCAAACAAGCTAGCAGGACTGCAGGATTTACAGGAGTGCGTGAACAAGCTGCTGTTGCTGCGGCGGACGAGGGATGCCTTTGCGGCACATCGACGGGAGAAATGGGTGGATGAGGTGTTTGATGGATCGTTGAGATTGCTGGACTTGTGTAGCGCTTCTAAGGATGGTGTTATTCATACCAAGGAGTGTGTGAGGGAGTTACAATCATTGGTTAGGAGAAGATCGTCTTCTTGGTGTTGCGGAAATGGTGTTGCTAATCAGGTGGAGAAATATTTAGCATCAAGAAAAGTAGTGAAAAGAGCCATCCAAAAGGCTTTAGCAAGCGTGAAGACTTATGGGGCAAGGCCAAGTTCAATCTCCATTAAAGACACCGAAACTATTGCTTTAATAACCCTATTATTCGACGTAGAAGTTGCAAGTGTGAATGTTTTTGAAGCACTTTTGAGCTATGTTTTGGGGAAGAAAGGAAAGGCCAAGGGTAGTGGTTGGGCGCTAGTTTCAAAGTTGATGCGCTCCAAACGTGTGCTTTTAACTGAGGACGGTGCAGAAGGAGAGGCAAACGAATTTGCCACCATAGATGCAGCAGTCGATGTGGTGGCGAGTAGATTAGCTTCTGATAGCAGCACGATCATAGGTGGTGGTGGCATAGAGAGCATGGGAGATCAGTTAGGAAAGTTGGAAGCATGTGTTCAAGATTTAGAAGGAGGATTGGAGGGTTTGTTTAGAAGATTGATAAGAAATAGGGTTTCATTATTGAATATTATCAATAACTAA

Protein sequence

MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFDVEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIINN*

Homology

[Close]

BLAST of Cucsa.119290.1 vs. TrEMBL
Match: A0A0A0KG43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127330 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 3.1e-166
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60
           MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN
Sbjct: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60

Query: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120
           KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS
Sbjct: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120

Query: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180
           SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD
Sbjct: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180

Query: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240
           VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA
Sbjct: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240

Query: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300
           VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII
Sbjct: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300

Query: 301 NN 303
           NN
Sbjct: 301 NN 302

[Close]

BLAST of Cucsa.119290.1 vs. TrEMBL
Match: W9RKX3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014372 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-71
Identity = 155/303 (51.16%), Postives = 208/303 (68.65%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLLL 64
           S YH RSNS PTRPHPL   CDEHLCRL A ++   ++  +++KL+GL+DL +CV KL  
Sbjct: 6   SQYHVRSNSFPTRPHPLFQRCDEHLCRLGASEAT--SSSSLSHKLSGLEDLHDCVEKLFQ 65

Query: 65  LRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWC 124
           L  T+ AF   R EKWVDE  DGSLRLLD+CSA+KD V+HTKEC RE+QS++RRR  +  
Sbjct: 66  LPLTQQAFVHSRHEKWVDEQVDGSLRLLDMCSAAKDAVLHTKECAREVQSIMRRRRGAEV 125

Query: 125 CGNGVANQVEKYLASRKVVKRAIQKAL----ASVKTYGARPSSISIKDTETIALITLLFD 184
              G+A +V KYLASRKVVK+AI+KAL    A+VK+  + P++  +   ET AL+ +L +
Sbjct: 126 ---GLAGEVTKYLASRKVVKKAIRKALENMKAAVKSSSSSPTNKDM-TVETAALVGVLRE 185

Query: 185 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRS-KRVLLTEDGAEGEANEFATIDA 244
           VE  S+ VFE+LL ++ G K + K SGW+LVSKLM + K+V   ++  E + NEFA ++ 
Sbjct: 186 VESVSLAVFESLLCFISGPKAQTKLSGWSLVSKLMNNKKKVGCDQEAQETDVNEFAKVEE 245

Query: 245 AVDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNI 303
           A+  +   +  D+S +     IE+   +L  LE CVQD E  LE LFRRLI+NRVSLLNI
Sbjct: 246 ALQRL---MCHDTSKVENSLHIENAQTELQSLELCVQDFEERLERLFRRLIKNRVSLLNI 299

[Close]

BLAST of Cucsa.119290.1 vs. TrEMBL
Match: M5VME9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025877mg PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-71
Identity = 149/302 (49.34%), Postives = 212/302 (70.20%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKAMD---SAPWTAFGMANKLAGLQDLQECVNK 64
           SNYH RS SLP++PHPL  +C++HL R+ A D   S+ +++  ++ KL+GL DL  C+N+
Sbjct: 11  SNYHIRSISLPSKPHPLFQQCEDHLLRIAASDASSSSSYSSSSISQKLSGLLDLHNCLNE 70

Query: 65  LLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSS 124
           L  L  T++AF   + EKWVDE+ DGSLRLLD+C+A+KD +IHTKEC RE+QS++RRR  
Sbjct: 71  LFQLPLTQEAFVREQNEKWVDELLDGSLRLLDVCTAAKDALIHTKECAREIQSIMRRRRG 130

Query: 125 SWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPS-SISIKDTETIALITLLFD 184
                +G  N+V KYLASRKVVK+A+ KAL +++T   + + S + KD  T+ALI +L +
Sbjct: 131 G---KSGFTNEVRKYLASRKVVKKAVCKALGTLRTSQKKSTFSSTNKDNVTVALIGVLRE 190

Query: 185 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 244
           VE  S+ VFE+LLS++ G K  +K  GW+ VSKLM +K+V   ED  + E NEFA +DAA
Sbjct: 191 VEAVSLTVFESLLSFISGAKSASKMRGWSFVSKLMLTKKVGCEED--KTEINEFADVDAA 250

Query: 245 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 303
           +  +  +  S+S +++    ++S   +L +LE C QDLE GLE LFRRLI+NRVSLLN +
Sbjct: 251 LSSLVCQETSNSDSMVDSENVQS---ELQQLEMCSQDLEEGLECLFRRLIKNRVSLLNTL 304

[Close]

BLAST of Cucsa.119290.1 vs. TrEMBL
Match: W9S9W8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014368 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.4e-70
Identity = 154/301 (51.16%), Postives = 212/301 (70.43%), Query Frame = 1


Query: 4   SSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLL 63
           +S++H RSNSLP++ +PL+ +C+E+L RL+A  +   ++F +  +L+GL+DL ECV KLL
Sbjct: 5   NSHFHVRSNSLPSQSNPLLLQCNENLSRLEARGATSSSSF-ITQRLSGLEDLHECVEKLL 64

Query: 64  LLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSW 123
           LL  T+ AF   R+E+W+D++ DGSLRLLDLCS++KD V+HTKEC R++QS++RRR  + 
Sbjct: 65  LLPSTQQAFVQGRQEQWIDQLVDGSLRLLDLCSSAKDAVLHTKECARDIQSIMRRRRGAE 124

Query: 124 CCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARP--SSISIKDTETIALITLLFDV 183
               G+ +++ KYLASRKVVKRAI KAL S+K+   +   S +S KD ETIALI++L +V
Sbjct: 125 V---GLESEISKYLASRKVVKRAINKALGSLKSVETKSSFSDLSNKDGETIALISVLKEV 184

Query: 184 EVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAV 243
           EV ++ VFE+LLS++ G K + K  GW+LVSK+M SKRV   E   E + NEFA +DAA+
Sbjct: 185 EVVALAVFESLLSFISGPKAQTKLGGWSLVSKIMHSKRVGCEE---EQQVNEFAKVDAAM 244

Query: 244 DVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIIN 303
                RL S          IE +  +L  LE CVQD E  LE LFRRLI+ RVSLLNI+N
Sbjct: 245 ----HRLMSHKMQ------IEKVQSELQILEMCVQDFEERLECLFRRLIKTRVSLLNILN 288

[Close]

BLAST of Cucsa.119290.1 vs. TrEMBL
Match: W9RW89_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014365 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.6e-68
Identity = 150/299 (50.17%), Postives = 208/299 (69.57%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLLLL 65
           ++H RSNSLP++ +PL+ +C+E+L RL+A  +   ++F +  KL+GL+DL ECV KLLL 
Sbjct: 7   HFHVRSNSLPSQSNPLLLQCNENLSRLEACGATSSSSF-ITQKLSGLEDLHECVEKLLLF 66

Query: 66  RRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCC 125
             T+ AF   R+E+W+D++ DGSLRLLDLCS++KD V+HTKEC R++QS++ RR  +   
Sbjct: 67  PSTQQAFVQGRQEQWIDQLVDGSLRLLDLCSSAKDAVLHTKECARDIQSIMHRRRGAEV- 126

Query: 126 GNGVANQVEKYLASRKVVKRAIQKALASVKTYGARP--SSISIKDTETIALITLLFDVEV 185
             G+ +++ KYLASRKVVKRA+ KAL S+K+   +   S +S KD ETIALI++L +VEV
Sbjct: 127 --GLESEISKYLASRKVVKRALNKALGSLKSVETKSSFSDLSNKDGETIALISVLKEVEV 186

Query: 186 ASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDV 245
            ++ VFE+LLS++ G K + K  GW+LVSK+M SKRV   E   E + NEFA +DAA+  
Sbjct: 187 VTLAVFESLLSFISGPKAQTKLGGWSLVSKIMHSKRVGCEE---EQQVNEFAKVDAAM-- 246

Query: 246 VASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIINN 303
              RL S          IE +  +L  LE CVQD E  LE LFRRLI+ RVSLLNI+N+
Sbjct: 247 --HRLMSHKMQ------IEKVQSELQILEMCVQDFEERLECLFRRLIKTRVSLLNILND 288

[Close]

BLAST of Cucsa.119290.1 vs. TAIR10
Match: AT2G17080.1 (AT2G17080.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40
Identity = 104/298 (34.90%), Postives = 169/298 (56.71%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFG-MANKLAGLQDLQECVNKLLL 65
           ++H RSNS P+R HP     DE L RL++ + A  ++   +  +L  LQ+L E ++KL+ 
Sbjct: 4   SFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDKLIS 63

Query: 66  LRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWC 125
              T+ A +    +K V+++ DGSLR+LDLC+ SKD +   KE + E+QS++RR+     
Sbjct: 64  RPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGD-- 123

Query: 126 CGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFDVEVA 185
               ++ +V+KYL SRK +K++ QK   S+K   A  +     + +T+A+     + E  
Sbjct: 124 ----LSEEVKKYLTSRKSLKKSFQKVQKSLKVTQAEDN-----NDDTLAVFG---EAEAI 183

Query: 186 SVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDVV 245
           ++++F++LLSY+ G K  +K   W++VSKLM  K+V       E + NEF  +D      
Sbjct: 184 TLSLFDSLLSYMSGSKTCSK---WSVVSKLMNKKKVT-----CEAQENEFTKVD------ 243

Query: 246 ASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIINN 303
            S   S+ +  +         D +  LE+C+QDLE GLE L + LI+ RVS LNI+ +
Sbjct: 244 -SEFQSEKTLKM---------DDVQNLESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

[Close]

BLAST of Cucsa.119290.1 vs. TAIR10
Match: AT4G35200.1 (AT4G35200.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-40
Identity = 105/294 (35.71%), Postives = 164/294 (55.78%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLLLL 65
           ++H RSNS P+R HP     DE L RL++ DSA  ++  +  +L+ LQDL + + K++ L
Sbjct: 4   SFHVRSNSYPSRQHPQAAHVDEQLTRLRSSDSA--SSSSICQRLSNLQDLHDSLEKMIRL 63

Query: 66  RRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCC 125
             T  A +  + EK    + DGSLR+LDLC+ +KD +   KE + E+QS++RR+      
Sbjct: 64  SVTNLALSQDQIEK----LLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGD--- 123

Query: 126 GNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFDVEVAS 185
              ++ +V+KYL SRK +K+++QK + S+K   ++ S        T A + +    E  +
Sbjct: 124 ---LSGEVKKYLVSRKFLKKSLQKVIKSLKVCQSKDS--------TNASLVVFGRAEAVT 183

Query: 186 VNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDVVA 245
           + +FE+L S++ G K   K   W+LVSK+M   +V       E EANEF  ID       
Sbjct: 184 MALFESLFSFMSGSKACGK---WSLVSKMMSQNKVT-----CEAEANEFTRID------- 243

Query: 246 SRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNI 300
           S   S+ S  +         + +  LE+C+QDLE G+E L + LI+ RVS+LNI
Sbjct: 244 SEFQSEKSLQM---------EDVQNLESCIQDLEDGIESLSKSLIKYRVSILNI 253

[Close]

BLAST of Cucsa.119290.1 vs. TAIR10
Match: AT4G35210.1 (AT4G35210.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 154.8 bits (390), Expect = 8.3e-38
Identity = 99/294 (33.67%), Postives = 159/294 (54.08%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLLLL 65
           ++H RS+S P+R HP     DE L RL++  +A  ++  +  +L+ LQDL + + K++ L
Sbjct: 4   SFHVRSSSYPSRQHPQAAHVDEQLTRLRSSGTA--SSSSICQRLSNLQDLHDSLEKMIRL 63

Query: 66  RRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCC 125
             T  A +  + EK    + DGS+++LDLCS SKDG+   KE ++E+QS+VRR+      
Sbjct: 64  SVTNQALSQDQIEK----LLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGD--- 123

Query: 126 GNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFDVEVAS 185
              ++ +V+KYLASRK +K++ +K L S+KT   +  ++++             + E  +
Sbjct: 124 ---LSAEVKKYLASRKFLKKSFEKVLKSLKTSQNKNDALAV-----------FGEAETVT 183

Query: 186 VNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDVVA 245
           + +FE+L S++ G K   K   W+LVSK+M       ++   E EANEF  +D       
Sbjct: 184 IALFESLFSFMSGSKACGK---WSLVSKMMSQ-----SKGTCEAEANEFTRVDMEFQSEK 243

Query: 246 SRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNI 300
           S    D                +  LE C+QDLE G+  L + LI+ RVS+LNI
Sbjct: 244 SLQMED----------------VQNLEICIQDLEDGIGSLSKSLIKYRVSILNI 250

[Close]

BLAST of Cucsa.119290.1 vs. TAIR10
Match: AT2G17070.1 (AT2G17070.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-37
Identity = 97/294 (32.99%), Postives = 163/294 (55.44%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKAMD-SAPWTAFGMANKLAGLQDLQECVNKLLL 65
           ++H RS+S P+ PHP     DE L RL++ + ++  ++  +  +L  LQ+L E ++KL+ 
Sbjct: 4   SFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLIR 63

Query: 66  LRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWC 125
           L  T+ A    + +K V+++ DGSL++LD+C+ SKD +   KE + E+QS++RR+     
Sbjct: 64  LPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGD-- 123

Query: 126 CGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFDVEVA 185
               ++ +V+KYLASRK  K+  QK   S+K   A  +    KD      + +  + E  
Sbjct: 124 ----LSGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDN----KDKS----LAVFGEAEAV 183

Query: 186 SVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDVV 245
           ++ +F++L SY+ G K  +K   W++VSKLM  K++       E + NEF  +D      
Sbjct: 184 TIAMFDSLFSYMSGSKTCSK---WSVVSKLMNKKKIT-----CEAQENEFTKVD------ 243

Query: 246 ASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLN 299
            S   S+ +  +         + +  LE+C+QD E GLE L + LI+ RVS+LN
Sbjct: 244 -SEFQSEKTLKM---------EDVQILESCIQDFEDGLESLSKSLIKYRVSILN 259

[Close]

BLAST of Cucsa.119290.1 vs. TAIR10
Match: AT4G35710.1 (AT4G35710.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 115.2 bits (287), Expect = 7.2e-26
Identity = 88/296 (29.73%), Postives = 154/296 (52.03%), Query Frame = 1


Query: 10  RSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVNKLLLLRRTR 69
           RS SLP+R  P  +  +E L ++K +++   ++  +   LAGL++L   + + L +   +
Sbjct: 11  RSISLPSRSQPSTSGLEESLNKIKTINTTTGSSESILMGLAGLEELYIFLEEFLKMGSKQ 70

Query: 70  DAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS-SSWCCGNG 129
              ++   E +++E+ DGSLRL+D+CS S+D ++ T E VR +QS VRR+  S    G+ 
Sbjct: 71  RVMSSGGSE-FMEEMLDGSLRLMDICSVSRDLMVETHEHVRGVQSYVRRKKVSGGGGGDK 130

Query: 130 VANQVEKYLASRKVVKRAIQKALASVKTY--GARPSSISIKDTETIALITLLFDVEVASV 189
           +   V  Y+  RK +++  +K L S+K    G R      +D + +A+I  +  V   SV
Sbjct: 131 IDVAVSDYVGFRKNMRKEAKKLLGSLKKVDGGTRSCDNDHEDEQLVAVIDRVRRVVSVSV 190

Query: 190 NVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVDVVAS 249
            V ++ L  +  +K   K      ++ +++ K+     D      N   T+D+A  +   
Sbjct: 191 VVLKSFLELLSRRKSNIKSK----LASVLKMKK-----DNHAPAKNVLETLDSA--IFGD 250

Query: 250 RLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIINN 303
            L+ D            + ++L ++E C+   E  LEGLFRRLIR R S+LNII++
Sbjct: 251 FLSHD-----------DLQNELEEVEMCIGGFERNLEGLFRRLIRTRASILNIISH 283

[Close]

BLAST of Cucsa.119290.1 vs. NCBI nr
Match: gi|449444560|ref|XP_004140042.1| (PREDICTED: uncharacterized protein LOC101209279 [Cucumis sativus])

HSP 1 Score: 592.4 bits (1526), Expect = 4.4e-166
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60
           MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN
Sbjct: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60

Query: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120
           KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS
Sbjct: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120

Query: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180
           SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD
Sbjct: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180

Query: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240
           VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA
Sbjct: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240

Query: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300
           VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII
Sbjct: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300

Query: 301 NN 303
           NN
Sbjct: 301 NN 302

[Close]

BLAST of Cucsa.119290.1 vs. NCBI nr
Match: gi|659094947|ref|XP_008448320.1| (PREDICTED: uncharacterized protein LOC103490547 [Cucumis melo])

HSP 1 Score: 578.6 bits (1490), Expect = 6.6e-162
Identity = 297/302 (98.34%), Postives = 299/302 (99.01%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60
           MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTA GMANKLAGLQDLQECVN
Sbjct: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTASGMANKLAGLQDLQECVN 60

Query: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120
           KLLLLRRTRDAFAA RREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS
Sbjct: 61  KLLLLRRTRDAFAAQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120

Query: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180
           SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGA+PSSISIKDTETIALITLLFD
Sbjct: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSSISIKDTETIALITLLFD 180

Query: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240
           VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFAT+DAA
Sbjct: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATVDAA 240

Query: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300
           VDVVASRLASD STIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII
Sbjct: 241 VDVVASRLASD-STIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300

Query: 301 NN 303
           NN
Sbjct: 301 NN 301

[Close]

BLAST of Cucsa.119290.1 vs. NCBI nr
Match: gi|1009150627|ref|XP_015893119.1| (PREDICTED: uncharacterized protein LOC107427255 [Ziziphus jujuba])

HSP 1 Score: 282.0 bits (720), Expect = 1.3e-72
Identity = 160/303 (52.81%), Postives = 209/303 (68.98%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFG---MANKLAGLQDLQECVNK 64
           S YH RSNSLPTRPHPL+  C+ HLCRL A D    T+     +++KL+GL+DL +CV+K
Sbjct: 11  SQYHVRSNSLPTRPHPLIQLCNTHLCRLGASDGTSSTSSSSSSISHKLSGLEDLHDCVDK 70

Query: 65  LLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSS 124
           LLLL  T+ AF   R EKWVDE+ DGSLRLLD CSA+KD V+HTKEC RE+QS++R R  
Sbjct: 71  LLLLPLTQKAFVQGRNEKWVDELLDGSLRLLDACSAAKDAVLHTKECAREVQSIIRTRRG 130

Query: 125 SWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPS-SISIKDTETIALITLLFD 184
                 G+ ++V KYLASRKV+K+A+ KAL ++K  G R   S+S KD ET+AL+ +L +
Sbjct: 131 G---EGGLVSEVRKYLASRKVMKKAVSKALGNLK--GVRTKCSVSSKDNETVALVGVLRE 190

Query: 185 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKL-MRSKRVLLTEDGAEGEANEFATIDA 244
           VE  ++ VFE+LLS+  G K  +K SGW+LVS L M SK+V   E+  E +ANEFA +DA
Sbjct: 191 VEAVTLAVFESLLSFTSGTKAGSKLSGWSLVSNLVMNSKKVGCDEE--ETDANEFAKVDA 250

Query: 245 AVDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNI 303
           A+  +       S        +E++  +L KLE CVQDLEG LE +FRRLI+ RVSLLNI
Sbjct: 251 ALQSLLCYDTEKSEQY--NPQVENVRSELQKLELCVQDLEGRLEYIFRRLIKIRVSLLNI 304

[Close]

BLAST of Cucsa.119290.1 vs. NCBI nr
Match: gi|658049962|ref|XP_008360689.1| (PREDICTED: uncharacterized protein LOC103424386 [Malus domestica])

HSP 1 Score: 278.5 bits (711), Expect = 1.4e-71
Identity = 151/300 (50.33%), Postives = 211/300 (70.33%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKAMD-SAPWTAFGMANKLAGLQDLQECVNKLL 64
           SNYH RS SLP++PHPL  +C++HL R+ A D S+ +++  ++++L+ L DL  CVNKL 
Sbjct: 11  SNYHVRSISLPSKPHPLFQQCEDHLLRIAASDVSSSFSSSSISHRLSDLLDLHNCVNKLF 70

Query: 65  LLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSW 124
            L   ++AF   R EKWVDE+ DGSLRLLD+C+A+KD +IHTKECVRE+QS++RRR    
Sbjct: 71  QLPLAQEAFVRERNEKWVDELLDGSLRLLDVCTAAKDALIHTKECVREIQSIMRRRRGG- 130

Query: 125 CCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPS-SISIKDTETIALITLLFDVE 184
              +G  N+V KY ASRKVVK+AI KAL ++++   + + S + KD   +ALI  L +VE
Sbjct: 131 --KSGFTNEVRKYSASRKVVKKAICKALGTLRSSQKKCTFSSTNKDNVAVALIGALREVE 190

Query: 185 VASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAAVD 244
             ++ VFE+LLS++ G K ++K SGW+ VSKLM +K+V   ED   G  NEFA +DAA++
Sbjct: 191 AVTLTVFESLLSFISGAKSQSKMSGWSFVSKLMLTKKVACDEDDKTG-INEFADVDAALN 250

Query: 245 VVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIINN 303
            +  + AS S  ++ G   E+M  +L +LE C QDLE GLE LFRRLI+NRVSLLN ++N
Sbjct: 251 SLVCQEASKSDNMVDG---ENMQSELQQLELCSQDLEEGLESLFRRLIKNRVSLLNTLSN 303

[Close]

BLAST of Cucsa.119290.1 vs. NCBI nr
Match: gi|657980968|ref|XP_008382492.1| (PREDICTED: uncharacterized protein LOC103445280 [Malus domestica])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 148/304 (48.68%), Postives = 215/304 (70.72%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMD-SAPWTAFGMANKLAGLQDLQECV 60
           +   SNYH RS SLP++PHPL  +C++HL R+ A D S+ +++  ++++L+ L DL  CV
Sbjct: 7   LNSKSNYHIRSISLPSKPHPLFQQCEDHLLRIAASDVSSSFSSSSISHRLSSLLDLHNCV 66

Query: 61  NKLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRR 120
           N+L  L  T++AF   R EKWVDE+ DGSLRLLD+C+A+KD +IHTKECVRE+QS++RRR
Sbjct: 67  NELFQLPLTQEAFVRERNEKWVDELLDGSLRLLDVCTAAKDALIHTKECVREIQSIMRRR 126

Query: 121 SSSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPS-SISIKDTETIALITLL 180
                  +G  N+V KY ASRKVVK+AI KAL ++++   + + S + KD   +ALI  L
Sbjct: 127 RGGI---SGFTNEVRKYSASRKVVKKAICKALGTLRSSQKKGTFSSTNKDNVAVALIGAL 186

Query: 181 FDVEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATID 240
            +VE  ++ VFE+LLS++ G K ++K SGW+ VSKLM +K+V   E+  + + NEFA +D
Sbjct: 187 REVEAVTLTVFESLLSFISGAKSQSKMSGWSFVSKLMLTKKVACDEED-KADLNEFADVD 246

Query: 241 AAVDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLN 300
           AA++ ++ + AS S  ++    ++S   +L +LE C QDLE GLEGLFRRLI+NRVSLLN
Sbjct: 247 AALNSLSCQEASKSDNVVDSENVQS---ELQQLELCSQDLEEGLEGLFRRLIKNRVSLLN 303

Query: 301 IINN 303
            ++N
Sbjct: 307 TLSN 303

The following BLAST results are available for this feature:

BLAST of Cucsa.119290.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG43_CUCSA	3.1e-166	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127330 PE=4 SV=1	[more]
W9RKX3_9ROSA	3.7e-71	51.16	Uncharacterized protein OS=Morus notabilis GN=L484_014372 PE=4 SV=1	[more]
M5VME9_PRUPE	3.7e-71	49.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025877mg PE=4 SV=1	[more]
W9S9W8_9ROSA	5.4e-70	51.16	Uncharacterized protein OS=Morus notabilis GN=L484_014368 PE=4 SV=1	[more]
W9RW89_9ROSA	6.6e-68	50.17	Uncharacterized protein OS=Morus notabilis GN=L484_014365 PE=4 SV=1	[more]

BLAST of Cucsa.119290.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17080.1	1.0e-40	34.90	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35200.1	5.2e-40	35.71	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35210.1	8.3e-38	33.67	Arabidopsis protein of unknown function (DUF241)	[more]
AT2G17070.1	3.1e-37	32.99	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35710.1	7.2e-26	29.73	Arabidopsis protein of unknown function (DUF241)	[more]

BLAST of Cucsa.119290.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444560\|ref\|XP_004140042.1\|	4.4e-166	100.00	PREDICTED: uncharacterized protein LOC101209279 [Cucumis sativus]	[more]
gi\|659094947\|ref\|XP_008448320.1\|	6.6e-162	98.34	PREDICTED: uncharacterized protein LOC103490547 [Cucumis melo]	[more]
gi\|1009150627\|ref\|XP_015893119.1\|	1.3e-72	52.81	PREDICTED: uncharacterized protein LOC107427255 [Ziziphus jujuba]	[more]
gi\|658049962\|ref\|XP_008360689.1\|	1.4e-71	50.33	PREDICTED: uncharacterized protein LOC103424386 [Malus domestica]	[more]
gi\|657980968\|ref\|XP_008382492.1\|	1.8e-71	48.68	PREDICTED: uncharacterized protein LOC103445280 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.119290	Cucsa.119290	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.119290.1	Cucsa.119290.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.119290.1.CDS.2	Cucsa.119290.1.CDS.2	CDS
Cucsa.119290.1.CDS.1	Cucsa.119290.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.119290.1.three_prime_UTR.1	Cucsa.119290.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 48..299 score: 6.8
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 5..301 score: 3.4E
None	No IPR available	PANTHER	PTHR31509:SF12	SUBFAMILY NOT NAMED	coord: 5..301 score: 3.4E