Cucsa.118410.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCGAAGCTTCGCGTTTCACGAGGCTCTCCTTCTGCTGCCTGCCGCAATCCTCATTTCTCCAAATTCCTTCTTCTCCAATCCTTTCTCTTTCCAGTTGCTCTCTTCAATTCCCCATTTCTCCAATTTCAGTTCTCCACCCACTTCCACCACTTTGCTCTCTTTTTTTCTTTTAAGTTTTCTTCACTAGGGTTCCATTCAAATGCCTATGGCTACCGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGCCGAAGCTCTGAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAACAAGGTATATCTATATCTATATCTATATCTTTGATTTGGGGCTTTTTGTGTTGTTCTGTCACGATTCTTAATTCTGATTTCGATTTTTCATGCGTTTCCTGTTTAACCCAGAATTTGGACTCCCATTTCGTTAATTGTTATAATTTGTCTGGATTTGAATCGTGCTCATCGAATATCAAAGTTTGATTCTTTTCATCTTATTGGTTGTGTTTTAGGCAGCAGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCATACTGGAGCCTTAATGCTTCGTGCTCAGACTCTTGTCACACTCAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAATCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAACTGGTATGGACTTACTACTTTTTATTATTGTCTTACTGTTTGTTCTCTAATCAAGTTGATGAAGGACTTAGTTGTTGGCATTATTCTTTGCTAATCTTGCCTGTTTATTATGCGATAGTTTATCTTGCTAATTGAATCAATTTAATGGCGGATTTGAGTTGTATTAGGGTTGGCTTTATTTGTATTACTGCAAGATGCTGATGTGATTGCTCGGTTTGTTTGTTAATCTTCAACTCTGGTTCTTGCGTGATTTTGTTTAATTATAAACTACTGTGATTGCGACCGTTGGTAAGAGATGTTTTTTCTGCTTAAGGAAAGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTAGAAGAAGAGGAGGAAGAAGAAGAATACGTTGATGAGTTCAATGAATATGCAGCCAATGAGAAGTGCATCGAGGGAAAAGAATATGTTGTCACTCCGACTTTTGAACAAGTACAGAAACCCGAGCATAATTGCAATTTGATTGAAAAGAAGATTATCAAGACTCAGGGTAACTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTGAAATTGACGGCTAAAAGTGAAGTTGTTGCCCCTCAAGGACAGATTAAGAAGGGCACAACAACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCGTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGACGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACCGTTGGTGTTAAACCTGTGAAATAAAGTGGAGAAGCATCATTCAATCAATTGCCTTGCTATCTTGATAGAAGAATGAAACACTGAGCAACTCCAAGCCTCAGTTGATTTTGGAAGTTCACATGTCTAAGATCAGCAAACTTTCAGACCTATGTAAAGTGTATTTGGTTACAAACAAAAGTAGCATTGTGAATATGATTGACGAGCAAGCTTCACACATGAAATCTTATACGGAGCTCCAGCTGATGCTGTTTAGTTTGAGTAATGTTACGTCTGCTGCACATCAATTTTGGGGTGGTTATCACAAATGAAGATCCTTTCTCTGGATTATGGATAATAGTTCTGGTATATGATGTTCAATACTTGTTTCTGTTTTCTGTGAAAATGTAGTAAATATTATTATATGCCGCAGTCCGCCATTGATTGATGGTAGATTCAGCAGTGCAGAAGCTTCAAATTTCATGATATTTGGAAGAACAAATACTTGTATGATGATACCTTAAAATCAATTCACTGCTTCTTCACATATACTTTACCTATGTTTTTTACTTGTATTCCTCTCTCTTTATTGTGTTTTATGAACTTTTTTTCAAAA CGCGAAGCTTCGCGTTTCACGAGGCTCTCCTTCTGCTGCCTGCCGCAATCCTCATTTCTCCAAATTCCTTCTTCTCCAATCCTTTCTCTTTCCAGTTGCTCTCTTCAATTCCCCATTTCTCCAATTTCAGTTCTCCACCCACTTCCACCACTTTGCTCTCTTTTTTTCTTTTAAGTTTTCTTCACTAGGGTTCCATTCAAATGCCTATGGCTACCGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGCCGAAGCTCTGAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAACAAGGCAGCAGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCATACTGGAGCCTTAATGCTTCGTGCTCAGACTCTTGTCACACTCAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAATCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAACTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTagaagaagaggaggaagaagaagaaTACGTTGATGAGTTCAATGAATATGCAGCCAATGAGAAGTGCATCGAGGGAAAAGAATATGTTGTCACTCCGACTTTTGAACAAGTACAGAAACCCGAGCATAATTGCAATTTGATTGAAAAGAAGATTATCAAGACTCAGGGTAACTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTGAAATTGACGGCTAAAAGTGAAGTTGTTGCCCCTCAAGGACAGATTAAGAAGGGCACAACAACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCGTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGACGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACCGTTGGTGTTAAACCTGTGAAATAAAGTGGAGAAGCATCATTCAATCAATTGCCTTGCTATCTTGATAGAAGAATGAAACACTGAGCAACTCCAAGCCTCAGTTGATTTTGGAAGTTCACATGTCTAAGATCAGCAAACTTTCAGACCTATGTAAAGTGTATTTGGTTACAAACAAAAGTAGCATTGTGAATATGATTGACGAGCAAGCTTCACACATGAAATCTTATACGGAGCTCCAGCTGATGCTGTTTAGTTTGAGTAATGTTACGTCTGCTGCACATCAATTTTGGGGTGGTTATCACAAATGAAGATCCTTTCTCTGGATTATGGATAATAGTTCTGGTATATGATGTTCAATACTTGTTTCTGTTTTCTGTGAAAATGTAGTAAATATTATTATATGCCGCAGTCCGCCATTGATTGATGGTAGATTCAGCAGTGCAGAAGCTTCAAATTTCATGATATTTGGAAGAACAAATACTTGTATGATGATACCTTAAAATCAATTCACTGCTTCTTCACATATACTTTACCTATGTTTTTTACTTGTATTCCTCTCTCTTTATTGTGTTTTATGAACTTTTTTTCAAAA ATGCCTATGGCTACCGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGCCGAAGCTCTGAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAACAAGGCAGCAGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCATACTGGAGCCTTAATGCTTCGTGCTCAGACTCTTGTCACACTCAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAATCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAACTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTAGAAGAAGAGGAGGAAGAAGAAGAATACGTTGATGAGTTCAATGAATATGCAGCCAATGAGAAGTGCATCGAGGGAAAAGAATATGTTGTCACTCCGACTTTTGAACAAGTACAGAAACCCGAGCATAATTGCAATTTGATTGAAAAGAAGATTATCAAGACTCAGGGTAACTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTGAAATTGACGGCTAAAAGTGAAGTTGTTGCCCCTCAAGGACAGATTAAGAAGGGCACAACAACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCGTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGACGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACCGTTGGTGTTAAACCTGTGAAATAA MPMATAPLNKIERAHQMYREGLYAEALRFYTEALSMAKTKSQRIALHSNRAACHLKLHDFNKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEAELEEEEEEEEYVDEFNEYAANEKCIEGKEYVVTPTFEQVQKPEHNCNLIEKKIIKTQGNCGLSEVERVNQKVEVKLTAKSEVVAPQGQIKKGTTTQGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK*
BLAST of Cucsa.118410.1 vs. Swiss-Prot
Match: UN45A_RAT (Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.7e-14 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. Swiss-Prot
Match: UN45A_MOUSE (Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2) HSP 1 Score: 79.7 bits (195), Expect = 5.7e-14 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. Swiss-Prot
Match: UN45A_HUMAN (Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.8e-13 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. Swiss-Prot
Match: UN45A_PONAB (Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.4e-12 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. Swiss-Prot
Match: TOM34_MOUSE (Mitochondrial import receptor subunit TOM34 OS=Mus musculus GN=Tomm34 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 37/115 (32.17%), Postives = 66/115 (57.39%), Query Frame = 1
HSP 2 Score: 48.1 bits (113), Expect = 1.8e-04 Identity = 30/101 (29.70%), Postives = 49/101 (48.51%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TrEMBL
Match: A0A0A0KEG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G137600 PE=4 SV=1) HSP 1 Score: 587.0 bits (1512), Expect = 1.2e-164 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TrEMBL
Match: M5WKY1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018824mg PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.9e-94 Identity = 193/290 (66.55%), Postives = 222/290 (76.55%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TrEMBL
Match: V4RMH2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005569mg PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 5.1e-94 Identity = 197/294 (67.01%), Postives = 217/294 (73.81%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TrEMBL
Match: A0A067F2L6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023491mg PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92 Identity = 195/290 (67.24%), Postives = 213/290 (73.45%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TrEMBL
Match: B9RI19_RICCO (Heat shock protein 70 (HSP70)-interacting protein, putative OS=Ricinus communis GN=RCOM_1575540 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 5.3e-91 Identity = 187/295 (63.39%), Postives = 222/295 (75.25%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TAIR10
Match: AT1G56090.1 (AT1G56090.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 295.0 bits (754), Expect = 4.9e-80 Identity = 168/296 (56.76%), Postives = 197/296 (66.55%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TAIR10
Match: AT3G25230.2 (AT3G25230.2 rotamase FKBP 1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10 Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TAIR10
Match: AT5G48570.1 (AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08 Identity = 35/128 (27.34%), Postives = 65/128 (50.78%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TAIR10
Match: AT3G17970.1 (AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III) HSP 1 Score: 55.1 bits (131), Expect = 8.5e-08 Identity = 30/101 (29.70%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. TAIR10
Match: AT5G09420.1 (AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V) HSP 1 Score: 52.4 bits (124), Expect = 5.5e-07 Identity = 31/114 (27.19%), Postives = 54/114 (47.37%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. NCBI nr
Match: gi|449464646|ref|XP_004150040.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP5 [Cucumis sativus]) HSP 1 Score: 587.0 bits (1512), Expect = 1.8e-164 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. NCBI nr
Match: gi|659112740|ref|XP_008456309.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Cucumis melo]) HSP 1 Score: 561.2 bits (1445), Expect = 1.0e-156 Identity = 278/290 (95.86%), Postives = 281/290 (96.90%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. NCBI nr
Match: gi|657982102|ref|XP_008383085.1| (PREDICTED: protein unc-45 homolog A-like [Malus domestica]) HSP 1 Score: 359.8 bits (922), Expect = 4.6e-96 Identity = 197/293 (67.24%), Postives = 224/293 (76.45%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. NCBI nr
Match: gi|1009130298|ref|XP_015882222.1| (PREDICTED: protein unc-45 homolog A [Ziziphus jujuba]) HSP 1 Score: 354.0 bits (907), Expect = 2.5e-94 Identity = 199/304 (65.46%), Postives = 219/304 (72.04%), Query Frame = 1
BLAST of Cucsa.118410.1 vs. NCBI nr
Match: gi|694428286|ref|XP_009341720.1| (PREDICTED: protein unc-45 homolog A-like [Pyrus x bretschneideri]) HSP 1 Score: 352.8 bits (904), Expect = 5.6e-94 Identity = 193/295 (65.42%), Postives = 222/295 (75.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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