Cucsa.105210.6 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.105210.6
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Geranylgeranyl transferase type-2 subunit beta
Location	scaffold00929 : 8750 .. 12710 (-)
Sequence length	1615

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAATTTGTAATTTGTACATATATTCTACGGTTCGGTTCGGTTCGGTTCGGTTCGGTCAGTTTGTCTAACTAATTTTTCTGCTGACCGATTCGAACTAGTCTGGTCGTTGGTTTGGACCGATTCTTCCACACCCCCACGACATATCGAACTCGTATATTCTCTTGTGTGCATCTCTTTAGGTGGAGCTCCGACCCCGACCAGGTATTCAATCATTTTGTTTCACTTCATTTCAGATTATAATTTCCCTGTTCTTCGTTATTATTCAATTTTTTTTTTTACTAATTTGAAGTAGCAATCATACAATTAGTTCTTGCCAAATCACTGATTCTGTATATTGACCATTCAAATTTTTTCATCGATTTCCATTAAATAAATAATAAACTAATTAGGCCAGGAATTGACAGATGGGGGAACTGGCAACTGAGAAGCATGTTCAATACATATTATCTGTTGAAAAGGTGCGTTTCCCATTTATGGATCTTGTGCATTTTAGGGACTTTTGTCATAGATCACTTTGAAACATGATATTGCACTTTGATTCGTGATTTCCTGTACCAGTAGAATTGTTTGTGAATGATTAAAAAAATACGTTTTTGAGTCATTTCAAAATCACTCTTTCTATCTGTTTATTCTATTGTTTTGTGTACAGAAAAAGGATGATTTTCAATCTGTGGTGATGGAACATCTAAGGATGAATGGTGCATACTGGGGGCTGACTGCACTTGATATTCTAGGAAAGCTCGATACTGTTGATGCTGATGAAGTTGTTTCATGGGTAATGTCATGCCAACACGAGTCAGGTAAGTTCTCTAAAGAATTTACGGCCTTAGTTTGTGCTTATGGGTGTGTGTTTGTCTTGAACAAAGTTGCTATTCAATCACATTACACTCTCTCAGCATGAATTTGGGGATTGTTTACCTGATTCTTATCTGAATCATGGTAATTACTTGGTGTTATATGGGCGTTGAGTCGTTGATAGCCAAGGCAGAAAAGTGAAACTTCATTGTGCAGGTGGTTTTTCTGGCAATGTTGGACATGATCCACACATACTTTACACCCTTAGTGCTGTGCAAGTTTTAGCTCTTTTTGACAAGCTGGATGTTTTAGATGTTGATAAGGTGACAAATTGTATCCTTTAAAAATGTTCTTTCTTCTCTTTTGATTGGACGTTTAGTTTTTGCTTACTTACATGAATCCTTGATAGGCGTTGGAGGCTAGAACCACTTTGGGTAACAGAATTTCTAATTGTATATTCCTCATCAGCATTCACTTATTAAAATAGTTGTTGAGAGCTTTTTTTTTTTTGGATCTTCTGACATGTACTTTTCTTTAGAAGGAAAAACACTTTTTCATTGATGTTGATATTATAAAAAGGGTTCAAACAATATCTAGATATAGGAGTATAATCACAAAAATGTTAATCCGTACTTATTGCTGAATAGTCTACAATTTCTTTCTATCTATAAGGTAGAAACAGTAGTCTTACTAGTTACCAGCATTTAATCACAGGACCTAGCTCTTTTTCAGCTATGGGAGAACATCATTGAAAAATGTTCTCATTGAGTAAACCATTTATTACCCAGAACAACCAAGGCTAGGAAGGGGGAATTCGACATTTTAACCTAAAAAAAGAACGAAAATCAGATGCACTTGACCCTCCCCTATATATCCTTTTTCTTGAGAAAAATCACTTGCATTAATATGAATGACAGTATATAATGCCATACGAAAACAGAACGGGTCATCAGAAAACAAGTTGCTTCAATCTTTTGAGCAGGGAAAAAGGAAAACAAGAAAAAAAGAAAAGAAAAAACATCATAACATAGACCTAAAATGAGGCATTAAAATGTACCATTTTTCCAACGTCTTCCCAAGAGCCTTCCAACTCTTAAAAGATATTCCCTTTATATTCCGGCCAAGTATTCCCCAAGGCTGCAAAAAGGTAGTCCGTCGAAGTGTAAGATCCTGTATCAAAAAGGAGAGTGTAAAACCACTTTCTCCAGTGCAGTATGATAACCAAACAAAGGCATAAAAGAGACCGTGTCTTTCAGAACTTCCAATAAATCTTGAGTGCAAAGGGACAAGGATGAAGAATGTGATTCAAATCTCCTTGTGCCTGATTGAATGCACCATTGACGGTTATGTACTAATATAGATGACGAGTTTTATAAAGTATCTGAATTTAGGGTAGTTGGTTGTCCCATGAGTGGCAAGATCAACTGTTTCACTTGACCCTACACTAGATGTTGTTGGCCTTCAAAATGAAGATGGCTCCTTTTCCGGGGATATTTGGGGTGAAGTTGATTCAAGGTAGTCTCCAACTCTATCCATTTCTTTATTATATCTTGTCTTAAGGAATCAATGCTTGGCTCAATCTTACAAGTCACCTAGCATAGAATGTTTATGAGCTTCATTTTCTGCCCTCCTTTCAGATTCTCATATATTGCAATTTTATGCTTATCGTTGTTACATCAATTGGATAAAATCAATGTTGAGAAGGCTGTGAACTTCGTCGTTAGTTGCAAAAATATGGATGGTGGTTTTGGCTGTACACCTGGTGGAGAGTCACATTCTGGGCAAAGTATGTAACCATCTCTTTTTTTTTTGTGTTTCAAGTACTCCAAAATTGTTCCTAAAAAATGATCAATTTACAAAGCGAGATAGCGGATAATATGCTATCAGTGTTGGTGATAGCACAATGTTGCTTTATTCTATGAACTTTACAATGGTGAAAAAATTGCAACTGAAGTATTAGGGTGAGAATAAGTTTCTGATTTACACAATACTCTTGCTTTAATCTCAACTAGCAGTTATTTACACTGTCCTTCAATCCAATTCAAATGTCTAAACGTCAATGCATTTCTGTAAATACAGTTTTCTGTTGTGTTGGCGCTCTTGCTCTTACGGGGTCTCTTCATCATGTTGACAAGGATCTTCTTGGCTGGTGGTTGTGTGAGCGGCAAGTTAAATCTGGAGGTCTTAATGGTCGCCCTGAAAAACTCCCTGATGTGGGTTTGGGATAAGATCACTTTTACAAAGTTTATTTCCATCAGTTGCTTTTGAACTTCTACTTAGAGATTTTGCTTCGTTGCTGCAGGTCTGCTATTCATGGTGGGTTCTTTCTAGCTTGATCATGATTGACAGGGTCCACTGGATTAGTAAGGAAAAACTGATCAAGTTCATCTTAGACTGCCAGGTTGCTTAGGGCTAATTGTTTCATTACCTAGTATGGCTTGTAAATTAGGGATCGTATTGTTTCTAATTTAAGATAAATTCCACAACGTCGTTCTTGTTATTGGAAAAGTGCAGGATACCGAAAATGGAGGAATTTCAGATAGACCAGATGATGCTGTTGATGTCTATCACACATACTTTGGAATAGCAGGTGCATCTTACTATCTTAAGCAGACAAATCTCCTACATATCTTCTTCCTATTGCAGATAACCAAATATTTGTTAGCCTGAAAACATTTATTGTTGGCTAATGGCTAATGTAAATTTATACGTAAATGAATGTTGCAGGACTTTCACTTCTTGAATATCCATCGTTGAAACCCATAGATCCAGCATACGCTTTACCAGTCGATGTCGTGAATAGGATTCGTCTTGGGAAAAGGCATGCTATCTAAGAGCGTTAAATCTTTTTTCCAAGTTCTGGTAACTTCAATTCCATATCAGTCTTTATTTGATGATGGGAAGACATTGATTAGTAGTGAAATTTAGGTGTTGGACCATGAGTTTTGGTTCAATATAGGTCTTAGACTTGTGAAGAAAGGTGAATCATGTACTGTATTGTAGACCAATAGTCAATTGTCACTGGCAGGATTTGATCAAAGTACAATGATCTAGAAATTGCCTATTGATTTCTTCTTATTTTCTTTTCTTTTGCGTTTCAAGATAGAGGTACATTTATCTTTTTGCTTAATAGGGTCTTGTTATATCATAGGATTGTTTGTGT

mRNA sequence

TGTAAATTTGTAATTTGTACATATATTCTAcggttcggttcggttcggttcggttcggtCAGTTTGTCTAACTAATTTTTCTGCTGACCGATTCGAACTAGTCTGGTCGTTGGTTTGGACCGATTCTTCCACACCCCCACGACATATCGAACTCGTATATTCTCTTGTGTGCATCTCTTTAGGTGGAGCTCCGACCCCGACCAGGCCAGGAATTGACAGATGGGGGAACTGGCAACTGAGAAGCATGTTCAATACATATTATCTGTTGAAAAGAAAAAGGATGATTTTCAATCTGTGGTGATGGAACATCTAAGGATGAATGGTGCATACTGGGGGCTGACTGCACTTGATATTCTAGGAAAGCTCGATACTGTTGATGCTGATGAAGTTGTTTCATGGGTAATGTCATGCCAACACGAGTCAGGTGGTTTTTCTGGCAATGTTGGACATGATCCACACATACTTTACACCCTTAGTGCTGTGCAAGTTTTAGCTCTTTTTGACAAGCTGGATGTTTTAGATGTTGATAAGGTGACAAATTATGTTGTTGGCCTTCAAAATGAAGATGGCTCCTTTTCCGGGGATATTTGGGGTGAAGTTGATTCAAGATTCTCATATATTGCAATTTTATGCTTATCGTTGTTACATCAATTGGATAAAATCAATGTTGAGAAGGCTGTGAACTTCGTCGTTAGTTGCAAAAATATGGATGGTGGTTTTGGCTGTACACCTGGTGGAGAGTCACATTCTGGGCAAATTTTCTGTTGTGTTGGCGCTCTTGCTCTTACGGGGTCTCTTCATCATGTTGACAAGGATCTTCTTGGCTGGTGGTTGTGTGAGCGGCAAGTTAAATCTGGAGGTCTTAATGGTCGCCCTGAAAAACTCCCTGATGTCTGCTATTCATGGTGGGTTCTTTCTAGCTTGATCATGATTGACAGGGTCCACTGGATTAGTAAGGAAAAACTGATCAAGTTCATCTTAGACTGCCAGGTTGCTTAGGGCTAATTGTTTCATTACCTAGTATGGCTTGTAAATTAGGGATCGTATTGTTTCTAATTTAAGATAAATTCCACAACGTCGTTCTTGTTATTGGAAAAGTGCAGGATACCGAAAATGGAGGAATTTCAGATAGACCAGATGATGCTGTTGATGTCTATCACACATACTTTGGAATAGCAGGACTTTCACTTCTTGAATATCCATCGTTGAAACCCATAGATCCAGCATACGCTTTACCAGTCGATGTCGTGAATAGGATTCGTCTTGGGAAAAGGCATGCTATCTAAGAGCGTTAAATCTTTTTTCCAAGTTCTGGTAACTTCAATTCCATATCAGTCTTTATTTGATGATGGGAAGACATTGATTAGTAGTGAAATTTAGGTGTTGGACCATGAGTTTTGGTTCAATATAGGTCTTAGACTTGTGAAGAAAGGTGAATCATGTACTGTATTGTAGACCAATAGTCAATTGTCACTGGCAGGATTTGATCAAAGTACAATGATCTAGAAATTGCCTATTGATTTCTTCTTATTTTCTTTTCTTTTGCGTTTCAAGATAGAGGTACATTTATCTTTTTGCTTAATAGGGTCTTGTTATATCATAGGATTGTTTGTGT

Coding sequence (CDS)

ATGGGGGAACTGGCAACTGAGAAGCATGTTCAATACATATTATCTGTTGAAAAGAAAAAGGATGATTTTCAATCTGTGGTGATGGAACATCTAAGGATGAATGGTGCATACTGGGGGCTGACTGCACTTGATATTCTAGGAAAGCTCGATACTGTTGATGCTGATGAAGTTGTTTCATGGGTAATGTCATGCCAACACGAGTCAGGTGGTTTTTCTGGCAATGTTGGACATGATCCACACATACTTTACACCCTTAGTGCTGTGCAAGTTTTAGCTCTTTTTGACAAGCTGGATGTTTTAGATGTTGATAAGGTGACAAATTATGTTGTTGGCCTTCAAAATGAAGATGGCTCCTTTTCCGGGGATATTTGGGGTGAAGTTGATTCAAGATTCTCATATATTGCAATTTTATGCTTATCGTTGTTACATCAATTGGATAAAATCAATGTTGAGAAGGCTGTGAACTTCGTCGTTAGTTGCAAAAATATGGATGGTGGTTTTGGCTGTACACCTGGTGGAGAGTCACATTCTGGGCAAATTTTCTGTTGTGTTGGCGCTCTTGCTCTTACGGGGTCTCTTCATCATGTTGACAAGGATCTTCTTGGCTGGTGGTTGTGTGAGCGGCAAGTTAAATCTGGAGGTCTTAATGGTCGCCCTGAAAAACTCCCTGATGTCTGCTATTCATGGTGGGTTCTTTCTAGCTTGATCATGATTGACAGGGTCCACTGGATTAGTAAGGAAAAACTGATCAAGTTCATCTTAGACTGCCAGGTTGCTTAG

Protein sequence

MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQVA*

Homology

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BLAST of Cucsa.105210.6 vs. Swiss-Prot
Match: PGTB1_ARATH (Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana GN=RGTB1 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.1e-124
Identity = 201/257 (78.21%), Postives = 232/257 (90.27%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           M +L  +KHV+YIL  EKKK+ F+SVVM+HLRMNGAYWGLT LD+L KL  V  +EV+SW
Sbjct: 9   MVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISW 68

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +M+CQHESGGF+GN GHDPHILYTLSAVQ+LALFDK+++LD+ KV++YV  LQNEDGSFS
Sbjct: 69  LMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFS 128

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGE+D+RFSYIAI CLS+L  LDKINVEKAV ++VSCKN+DGGFGCTPG ESH+GQI
Sbjct: 129 GDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQI 188

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSLHHVDKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWVLSSLIMIDR
Sbjct: 189 FCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDR 248

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWI K KL+KFILDCQ
Sbjct: 249 VHWIDKAKLVKFILDCQ 265

HSP 2 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 66/288 (22.92%), Postives = 130/288 (45.14%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHL----------------------------- 60
           M +L  +KHV+YIL  EKKK+ F+SVVM+HL                             
Sbjct: 9   MVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISW 68

Query: 61  -----------RMNGAY-----WGLTALDILG---KLDTVDADEVVSWVMSCQHESGGFS 120
                        N  +     + L+A+ IL    K++ +D  +V S+V   Q+E G FS
Sbjct: 69  LMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFS 128

Query: 121 GNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDIWGEVDSRFS 180
           G++  +    ++  A+  L++   LD ++V+K   Y+V  +N DG F      E  +   
Sbjct: 129 GDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQI 188

Query: 181 YIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCCVGALALTGS 240
           +  +  L++   L  ++ +    ++   +   GG    P   +     +  + +L +   
Sbjct: 189 FCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDR 248

[Close]

BLAST of Cucsa.105210.6 vs. Swiss-Prot
Match: PGTB2_ARATH (Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana GN=RGTB2 PE=1 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.2e-121
Identity = 202/258 (78.29%), Postives = 234/258 (90.70%), Query Frame = 1


Query: 3   ELATEKHVQYILSV--EKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 62
           +L   KH++YIL++  EKKK+ F+SVVM+HLRMNGAYWGLT L +L KL +V  DEVVSW
Sbjct: 4   KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63

Query: 63  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 122
           VM+CQHESGGF+GN GHDPH+LYTLSAVQ+LALFDKL++LDV+KV+NY+ GLQNEDGSFS
Sbjct: 64  VMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFS 123

Query: 123 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 182
           GDIWGEVD+RFSYIAI CLS+L  LDKINV+KAV+++VSCKN+DGGFGC+PG ESH+GQI
Sbjct: 124 GDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQI 183

Query: 183 FCCVGALALTGSLHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSSLIMID 242
           FCCVGALA+TG+LH VDKDLLGWWLCERQ  +SGGLNGRPEKLPDVCYSWWVLSSLIMID
Sbjct: 184 FCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMID 243

Query: 243 RVHWISKEKLIKFILDCQ 258
           RVHWI K KL+KFILD Q
Sbjct: 244 RVHWIEKAKLVKFILDSQ 261

[Close]

BLAST of Cucsa.105210.6 vs. Swiss-Prot
Match: PGTB2_HUMAN (Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 SV=2)

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-100
Identity = 161/254 (63.39%), Postives = 205/254 (80.71%), Query Frame = 1


Query: 4   LATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMS 63
           L  EKH  YI S   KKDD++  + E+LRM+G YWGLT +D++G+L  ++ +E+++++ S
Sbjct: 18  LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77

Query: 64  CQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDI 123
           CQHE GG S ++GHDPH+LYTLSAVQ+L L+D ++V+DV+KV  YV GLQ EDGSF+GDI
Sbjct: 78  CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDI 137

Query: 124 WGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCC 183
           WGE+D+RFS+ A+  L+LL +LD INVEKA+ FV+SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197

Query: 184 VGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
            G LA+T  LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257

Query: 244 ISKEKLIKFILDCQ 258
           I +EKL  FIL CQ
Sbjct: 258 IDREKLRNFILACQ 271

[Close]

BLAST of Cucsa.105210.6 vs. Swiss-Prot
Match: PGTB2_BOVIN (Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 8.0e-100
Identity = 159/254 (62.60%), Postives = 204/254 (80.31%), Query Frame = 1


Query: 4   LATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMS 63
           L  EKH  YI S   KKDD++  + E+LRM+G YWGLT +D++G+L  ++ +E+++++ S
Sbjct: 18  LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77

Query: 64  CQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDI 123
           CQHE GG S ++GHDPH+LYTLSAVQ+L L+D ++V+D++KV  YV  LQ EDGSF+GDI
Sbjct: 78  CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDI 137

Query: 124 WGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCC 183
           WGE+D+RFS+ A+  L+LL +LD INVEKA+ FV+SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197

Query: 184 VGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
            G LA+T  LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257

Query: 244 ISKEKLIKFILDCQ 258
           I +EKL  FIL CQ
Sbjct: 258 IDREKLRSFILACQ 271

[Close]

BLAST of Cucsa.105210.6 vs. Swiss-Prot
Match: PGTB2_MOUSE (Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=1 SV=2)

HSP 1 Score: 362.5 bits (929), Expect = 4.0e-99
Identity = 160/254 (62.99%), Postives = 202/254 (79.53%), Query Frame = 1


Query: 4   LATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMS 63
           L  EKH  YI S   KKDD++  + E+LRM+G YWGLT +D++G+L  ++ +E++ ++ S
Sbjct: 26  LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKS 85

Query: 64  CQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDI 123
           CQHE GG S ++GHDPH+LYTLSAVQ+L L+D + V++VDKV  YV  LQ EDGSF+GDI
Sbjct: 86  CQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDI 145

Query: 124 WGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCC 183
           WGE+D+RFS+ A+  L+LL +LD INVEKA+ FV+SC N DGGFGC PG ESH+GQI+CC
Sbjct: 146 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 205

Query: 184 VGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
            G LA+T  LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 206 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 265

Query: 244 ISKEKLIKFILDCQ 258
           I +EKL  FIL CQ
Sbjct: 266 IDREKLRSFILACQ 279

[Close]

BLAST of Cucsa.105210.6 vs. TrEMBL
Match: A0A0A0K723_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433280 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 2.9e-149
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW
Sbjct: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS
Sbjct: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI
Sbjct: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. TrEMBL
Match: A0A0B2SUM0_GLYSO (Geranylgeranyl transferase type-2 subunit beta OS=Glycine soja GN=glysoja_015417 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135
Identity = 228/257 (88.72%), Postives = 247/257 (96.11%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHV+YILSVEK+KD+F+SVVMEHLRMNGAYWGLT LD+LGKL +VD DEVVSW
Sbjct: 12  MGELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSW 71

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +MSCQHESGGF GNVGHDPHILYTLSAVQVLALFDKL+V+DVDKVT+Y+V LQNEDGSFS
Sbjct: 72  LMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSLQNEDGSFS 131

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGEVD+RFSYIAI CLS+LH LDKINVEKAV +++SCKNMDGGFGCTPGGESH+GQI
Sbjct: 132 GDMWGEVDTRFSYIAICCLSILHCLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 191

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSL  VDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 192 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 251

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 252 VHWISKEKLIKFILDCQ 268

[Close]

BLAST of Cucsa.105210.6 vs. TrEMBL
Match: A0A0K9R3A8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_111490 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135
Identity = 225/257 (87.55%), Postives = 241/257 (93.77%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           M EL  EKHVQY++SVEKKKD F+SVVMEHLRMNGAYWGLT LD+LGKL  VD DEV+SW
Sbjct: 1   MVELVAEKHVQYVISVEKKKDSFESVVMEHLRMNGAYWGLTTLDLLGKLQVVDQDEVISW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           VM CQHESGGF GN+GHDPHILYTLSAVQVLALFDK+ +LDV KVTNYVVGLQNEDGSFS
Sbjct: 61  VMQCQHESGGFGGNIGHDPHILYTLSAVQVLALFDKIQILDVSKVTNYVVGLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGEVD+RFSYIAI CLSLLHQLDKI+VEKAVN++V CKN+DGGFGCTPGGESH+GQI
Sbjct: 121 GDMWGEVDTRFSYIAICCLSLLHQLDKIDVEKAVNYIVRCKNLDGGFGCTPGGESHAGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWI KEKL KFILDCQ
Sbjct: 241 VHWIDKEKLAKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. TrEMBL
Match: Q6X0N9_SOYBN (Putative Rab geranylgeranyl transferase type II beta subunit OS=Glycine max PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135
Identity = 228/257 (88.72%), Postives = 247/257 (96.11%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHV+YILSVEK+KD+F+SVVMEHLRMNGAYWGLT LD+LGKL +VD DEVVSW
Sbjct: 1   MGELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +MSCQHESGGF GNVGHDPHILYTLSAVQVLALFDKL+V+DVDKVT+Y+V LQNEDGSFS
Sbjct: 61  LMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGEVD+RFSYIAI CLS+LH LDKINVEKAV +++SCKNMDGGFGCTPGGESH+GQI
Sbjct: 121 GDMWGEVDTRFSYIAICCLSILHCLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSL  VDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. TrEMBL
Match: I1KS88_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G111200 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135
Identity = 228/257 (88.72%), Postives = 247/257 (96.11%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHV+YILSVEK+KD+F+SVVMEHLRMNGAYWGLT LD+LGKL +VD DEVVSW
Sbjct: 1   MGELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +MSCQHESGGF GNVGHDPHILYTLSAVQVLALFDKL+V+DVDKVT+Y+V LQNEDGSFS
Sbjct: 61  LMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGEVD+RFSYIAI CLS+LH LDKINVEKAV +++SCKNMDGGFGCTPGGESH+GQI
Sbjct: 121 GDMWGEVDTRFSYIAICCLSILHCLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSL  VDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. TAIR10
Match: AT5G12210.1 (AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1)

HSP 1 Score: 446.4 bits (1147), Expect = 1.2e-125
Identity = 201/257 (78.21%), Postives = 232/257 (90.27%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           M +L  +KHV+YIL  EKKK+ F+SVVM+HLRMNGAYWGLT LD+L KL  V  +EV+SW
Sbjct: 9   MVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISW 68

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +M+CQHESGGF+GN GHDPHILYTLSAVQ+LALFDK+++LD+ KV++YV  LQNEDGSFS
Sbjct: 69  LMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFS 128

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGE+D+RFSYIAI CLS+L  LDKINVEKAV ++VSCKN+DGGFGCTPG ESH+GQI
Sbjct: 129 GDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQI 188

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSLHHVDKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWVLSSLIMIDR
Sbjct: 189 FCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDR 248

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWI K KL+KFILDCQ
Sbjct: 249 VHWIDKAKLVKFILDCQ 265

HSP 2 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 66/288 (22.92%), Postives = 130/288 (45.14%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHL----------------------------- 60
           M +L  +KHV+YIL  EKKK+ F+SVVM+HL                             
Sbjct: 9   MVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISW 68

Query: 61  -----------RMNGAY-----WGLTALDILG---KLDTVDADEVVSWVMSCQHESGGFS 120
                        N  +     + L+A+ IL    K++ +D  +V S+V   Q+E G FS
Sbjct: 69  LMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFS 128

Query: 121 GNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDIWGEVDSRFS 180
           G++  +    ++  A+  L++   LD ++V+K   Y+V  +N DG F      E  +   
Sbjct: 129 GDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQI 188

Query: 181 YIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCCVGALALTGS 240
           +  +  L++   L  ++ +    ++   +   GG    P   +     +  + +L +   
Sbjct: 189 FCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDR 248

[Close]

BLAST of Cucsa.105210.6 vs. TAIR10
Match: AT3G12070.1 (AT3G12070.1 RAB geranylgeranyl transferase beta subunit 2)

HSP 1 Score: 436.4 bits (1121), Expect = 1.2e-122
Identity = 202/258 (78.29%), Postives = 234/258 (90.70%), Query Frame = 1


Query: 3   ELATEKHVQYILSV--EKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 62
           +L   KH++YIL++  EKKK+ F+SVVM+HLRMNGAYWGLT L +L KL +V  DEVVSW
Sbjct: 4   KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63

Query: 63  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 122
           VM+CQHESGGF+GN GHDPH+LYTLSAVQ+LALFDKL++LDV+KV+NY+ GLQNEDGSFS
Sbjct: 64  VMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFS 123

Query: 123 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 182
           GDIWGEVD+RFSYIAI CLS+L  LDKINV+KAV+++VSCKN+DGGFGC+PG ESH+GQI
Sbjct: 124 GDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQI 183

Query: 183 FCCVGALALTGSLHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSSLIMID 242
           FCCVGALA+TG+LH VDKDLLGWWLCERQ  +SGGLNGRPEKLPDVCYSWWVLSSLIMID
Sbjct: 184 FCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMID 243

Query: 243 RVHWISKEKLIKFILDCQ 258
           RVHWI K KL+KFILD Q
Sbjct: 244 RVHWIEKAKLVKFILDSQ 261

[Close]

BLAST of Cucsa.105210.6 vs. TAIR10
Match: AT5G40280.1 (AT5G40280.1 Prenyltransferase family protein)

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 71/249 (28.51%), Postives = 127/249 (51.00%), Query Frame = 1


Query: 1   MGELATEKHVQYILS-VEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDAD---E 60
           M E+  +K + Y++  + +    F S  ++  R    YW L ++ +LG  +TVD +    
Sbjct: 78  MMEIQRDKQLDYLMKGLRQLGPQFSS--LDANRPWLCYWILHSIALLG--ETVDDELESN 137

Query: 61  VVSWVMSCQHESGGFSGNVGHDPHILYTLSAVQVLALF--DK-LDVLDVDKVTNYVVGLQ 120
            + ++  CQ   GG+ G  G  PH+  T +AV  L     DK L  ++ +K++ ++  ++
Sbjct: 138 AIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMK 197

Query: 121 NEDGSFSGDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGG 180
           +  G F     GE+D R  Y AI   S+L+ +D    +   ++++SC+  +GG G  PG 
Sbjct: 198 DTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGS 257

Query: 181 ESHSGQIFCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLS 240
           E+H G  +C + A+ L   +  ++ D L  W   RQ    G  GR  KL D CY++W  +
Sbjct: 258 EAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAA 317

Query: 241 SLIMIDRVH 243
             +++ R++
Sbjct: 318 PCVLLQRLY 322

[Close]

BLAST of Cucsa.105210.6 vs. TAIR10
Match: AT2G39550.1 (AT2G39550.1 Prenyltransferase family protein)

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 67/200 (33.50%), Postives = 101/200 (50.50%), Query Frame = 1


Query: 72  SGNVGHD-PHILYTLSAVQVLALFDK-LDVLDVDKVTNYVVGLQNEDGSFSG-DIWGEVD 131
           +G++ H+  H+  T  A+ +L +    L  +D   +   ++ LQ +DGSF    I GE D
Sbjct: 125 NGDLKHNGSHLASTYCALAILKVIGHDLSTIDSKSLLISMINLQQDDGSFMPIHIGGETD 184

Query: 132 SRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCCVGALA 191
            RF Y A     +L     ++ E A N++++C++ DGGFG  PG ESH G  +C + +L 
Sbjct: 185 LRFVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIASLR 244

Query: 192 LTG-----------SLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIM 251
           L G           S   +D  LL  W  +RQ   GG  GR  K  D CY++W+ + L +
Sbjct: 245 LMGYIGVDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKL 304

Query: 252 IDRVHWISKEKLIKFILDCQ 258
           I     I K  L KF++ CQ
Sbjct: 305 IGGDALIDKMALRKFLMSCQ 324

[Close]

BLAST of Cucsa.105210.6 vs. NCBI nr
Match: gi|778729139|ref|XP_011659536.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 4.2e-149
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW
Sbjct: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS
Sbjct: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI
Sbjct: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. NCBI nr
Match: gi|659122320|ref|XP_008461078.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta [Cucumis melo])

HSP 1 Score: 528.1 bits (1359), Expect = 8.7e-147
Identity = 252/257 (98.05%), Postives = 256/257 (99.61%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHVQYILSVEK+KDDFQSVVMEHLRMNGAYWGLTALDILGKL+ VDADEVVSW
Sbjct: 1   MGELATEKHVQYILSVEKRKDDFQSVVMEHLRMNGAYWGLTALDILGKLNIVDADEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           VMSCQHESGGF+GNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS
Sbjct: 61  VMSCQHESGGFAGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI
Sbjct: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWI+KEKLIKFILDCQ
Sbjct: 241 VHWINKEKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. NCBI nr
Match: gi|502140826|ref|XP_004504351.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cicer arietinum])

HSP 1 Score: 498.0 bits (1281), Expect = 9.7e-138
Identity = 231/257 (89.88%), Postives = 248/257 (96.50%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELA EKHV+YILS+EKKKD F+SVVMEHLRMNGAYWGLTALD+LGKLDT+D DEVVSW
Sbjct: 1   MGELAAEKHVRYILSIEKKKDSFESVVMEHLRMNGAYWGLTALDLLGKLDTLDVDEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +MSCQHESGGF GNVGHDPHILYTLSAVQVLALF+KLDV+DVDKVTNY+V LQNEDGSFS
Sbjct: 61  IMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDVDKVTNYIVSLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GDIWGEVD+RFSYIAI CLS+LH+LD+INVEKAV +++SCKNMDGGFGCTPGGESH+GQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSILHRLDRINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALALTGSL  VDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALALTGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. NCBI nr
Match: gi|1012104252|ref|XP_015958216.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Arachis duranensis])

HSP 1 Score: 491.5 bits (1264), Expect = 9.1e-136
Identity = 225/257 (87.55%), Postives = 248/257 (96.50%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGEL T+KHV+YILSVEK+KDDF+SVVMEHLRMNGAYWGLTALD++GKLD VD +EVVSW
Sbjct: 1   MGELVTDKHVKYILSVEKRKDDFESVVMEHLRMNGAYWGLTALDLMGKLDVVDVNEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           VMSCQH+SGGF GNVGHDPHILYTLSAVQVLALFDK+D++D DKVTNY+VGLQNEDGSFS
Sbjct: 61  VMSCQHDSGGFGGNVGHDPHILYTLSAVQVLALFDKMDLIDADKVTNYIVGLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGEVD+RFSYIAI CLS++H+LDKINVEKAV +++SCKNMDGGFGCTPGGESH+GQI
Sbjct: 121 GDMWGEVDTRFSYIAICCLSIIHRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALALTGSL  V+KDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALALTGSLDLVNKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWIS+EKLIKFILDCQ
Sbjct: 241 VHWISREKLIKFILDCQ 257

[Close]

BLAST of Cucsa.105210.6 vs. NCBI nr
Match: gi|947094204|gb|KRH42789.1| (hypothetical protein GLYMA_08G111200 [Glycine max])

HSP 1 Score: 490.0 bits (1260), Expect = 2.6e-135
Identity = 228/257 (88.72%), Postives = 247/257 (96.11%), Query Frame = 1


Query: 1   MGELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSW 60
           MGELATEKHV+YILSVEK+KD+F+SVVMEHLRMNGAYWGLT LD+LGKL +VD DEVVSW
Sbjct: 1   MGELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSW 60

Query: 61  VMSCQHESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120
           +MSCQHESGGF GNVGHDPHILYTLSAVQVLALFDKL+V+DVDKVT+Y+V LQNEDGSFS
Sbjct: 61  LMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSLQNEDGSFS 120

Query: 121 GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180
           GD+WGEVD+RFSYIAI CLS+LH LDKINVEKAV +++SCKNMDGGFGCTPGGESH+GQI
Sbjct: 121 GDMWGEVDTRFSYIAICCLSILHCLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180

Query: 181 FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
           FCCVGALA+TGSL  VDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 241 VHWISKEKLIKFILDCQ 258
           VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257

The following BLAST results are available for this feature:

BLAST of Cucsa.105210.6 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGTB1_ARATH	2.1e-124	78.21	Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana GN=RGTB...	[more]
PGTB2_ARATH	2.2e-121	78.29	Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana GN=RGTB...	[more]
PGTB2_HUMAN	1.2e-100	63.39	Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 S...	[more]
PGTB2_BOVIN	8.0e-100	62.60	Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=...	[more]
PGTB2_MOUSE	4.0e-99	62.99	Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=1 S...	[more]

BLAST of Cucsa.105210.6 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K723_CUCSA	2.9e-149	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433280 PE=4 SV=1	[more]
A0A0B2SUM0_GLYSO	1.8e-135	88.72	Geranylgeranyl transferase type-2 subunit beta OS=Glycine soja GN=glysoja_015417...	[more]
A0A0K9R3A8_SPIOL	1.8e-135	87.55	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_111490 PE=4 SV=1	[more]
Q6X0N9_SOYBN	1.8e-135	88.72	Putative Rab geranylgeranyl transferase type II beta subunit OS=Glycine max PE=4...	[more]
I1KS88_SOYBN	1.8e-135	88.72	Uncharacterized protein OS=Glycine max GN=GLYMA_08G111200 PE=4 SV=1	[more]

BLAST of Cucsa.105210.6 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12210.1	1.2e-125	78.21	RAB geranylgeranyl transferase beta subunit 1	[more]
AT3G12070.1	1.2e-122	78.29	RAB geranylgeranyl transferase beta subunit 2	[more]
AT5G40280.1	3.1e-25	28.51	Prenyltransferase family protein	[more]
AT2G39550.1	3.1e-25	33.50	Prenyltransferase family protein	[more]

BLAST of Cucsa.105210.6 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778729139\|ref\|XP_011659536.1\|	4.2e-149	100.00	PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cucumis sativus]	[more]
gi\|659122320\|ref\|XP_008461078.1\|	8.7e-147	98.05	PREDICTED: geranylgeranyl transferase type-2 subunit beta [Cucumis melo]	[more]
gi\|502140826\|ref\|XP_004504351.1\|	9.7e-138	89.88	PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cicer arietinum]	[more]
gi\|1012104252\|ref\|XP_015958216.1\|	9.1e-136	87.55	PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Arachis duranens...	[more]
gi\|947094204\|gb\|KRH42789.1\|	2.6e-135	88.72	hypothetical protein GLYMA_08G111200 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001330	PFTB_repeat
IPR008930	Terpenoid_cyclase/PrenylTrfase
IPR026873	Ptb1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0004663	Rab geranylgeranyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0018344	protein geranylgeranylation

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018344	protein geranylgeranylation
biological_process	GO:0018342	protein prenylation
cellular_component	GO:0005968	Rab-protein geranylgeranyltransferase complex
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004663	Rab geranylgeranyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.105210	Cucsa.105210	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.105210.6	Cucsa.105210.6-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.105210.6.three_prime_UTR.2	Cucsa.105210.6.three_prime_UTR.2	three_prime_UTR
Cucsa.105210.6.three_prime_UTR.1	Cucsa.105210.6.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.105210.6.CDS.7	Cucsa.105210.6.CDS.7	CDS
Cucsa.105210.6.CDS.6	Cucsa.105210.6.CDS.6	CDS
Cucsa.105210.6.CDS.5	Cucsa.105210.6.CDS.5	CDS
Cucsa.105210.6.CDS.4	Cucsa.105210.6.CDS.4	CDS
Cucsa.105210.6.CDS.3	Cucsa.105210.6.CDS.3	CDS
Cucsa.105210.6.CDS.2	Cucsa.105210.6.CDS.2	CDS
Cucsa.105210.6.CDS.1	Cucsa.105210.6.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.105210.6.five_prime_UTR.2	Cucsa.105210.6.five_prime_UTR.2	five_prime_UTR
Cucsa.105210.6.five_prime_UTR.1	Cucsa.105210.6.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001330	PFTB repeat	PFAM	PF00432	Prenyltrans	coord: 101..143 score: 1.4E-12coord: 197..239 score: 2.6E-12coord: 53..93 score: 6.6E-11coord: 245..257 score: 3.6coord: 148..191 score: 1.7
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	GENE3D	G3DSA:1.50.10.20		coord: 3..257 score: 3.5
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	unknown	SSF48239	Terpenoid cyclases/Protein prenyltransferases	coord: 3..256 score: 9.07
IPR026873	Geranylgeranyl transferase type-2 subunit beta	PANTHER	PTHR11774:SF11	GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETA	coord: 3..257 score: 3.0E
None	No IPR available	PANTHER	PTHR11774	GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT	coord: 3..257 score: 3.0E