Cucsa.079060.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATCTATGAAAAAACACTCTTTGGTATTTTATTTCTTGTTTGTGTTGTCATTGGCTATAGTTAAGCCAACCAAGGGTATCGGGCTGGAGAGATGGCACATCCATATTGTCAATGGCCTAAGCAATAACCAAAACTTGTTTATTCATTGTCAATCCAAAGATGATGATTTAGGGAAAATAAATCTTAGCGTTGGAGCAGAATTCAATTGGAGTTTTAAGATAAACTTTTGGGATACAACATTGTTTTGGTGTTACTTGCAGAAGCCAAATGCAGAGTCTGTGTCATTCGAAGCATTTTGGGTTGAGAGAAAAACGATTTGGCTATTTTATAGATGTTATAAGTCTAATTGTATTTGGACAGCTAAAGATGATGGAGTTTATTTGAAAGACAACCCGGTTAATAGAGATGTTTTGGTTCATAAGTGGGGATAATTATGTGTCAAAATGTAAAACTCTGTTTATTTCAATTAATAAAAAATTCCTCCCcGAACTTCTATTTGTATATTTTTTTttCGATTTTtCTTGGATGAGACATATTCATGTGTCTTAATCTTATTTTGCAAGGATTTATTTTATGTATAAATGTATTTTTATCTGTGTTATGATGGAAGTTTTTTTTTTTTttAaTATGGAGTCATGTTCCTTTTATTAGTTTTGTTTTGATAGTTTGGTTTAGGCTTTAATGTCATATTTTGTTTTCTTAATTAATTGCATTATTTTTTTtCATAAACCAAATATAAAGTATATCATTTAATTTGTTCTATTTTTTtAATATAATATAATTTGGGTATGATTGTGATGACATATAAGTTAAGTTCAATTTTGTATATCAAATAGATAAGGTAGATATTTCATATTTCTCAATTTTCAATTGATTGATTAACTTGATTTAAAGAGAGAAAACATATATATATCAGTAATTTGGAAAATG ATGAGATCTATGAAAAAACACTCTTTGGTATTTTATTTCTTGTTTGTGTTGTCATTGGCTATAGTTAAGCCAACCAAGGGTATCGGGCTGGAGAGATGGCACATCCATATTGTCAATGGCCTAAGCAATAACCAAAACTTGTTTATTCATTGTCAATCCAAAGATGATGATTTAGGGAAAATAAATCTTAGCGTTGGAGCAGAATTCAATTGGAGTTTTAAGATAAACTTTTGGGATACAACATTGTTTTGGTGTTACTTGCAGAAGCCAAATGCAGAGTCTGTGTCATTCGAAGCATTTTGGGTTGAGAGAAAAACGATTTGGCTATTTTATAGATGTTATAAGTCTAATTGTATTTGGACAGCTAAAGATGATGGAGTTTATTTGAAAGACAACCCGGTTAATAGAGATGTTTTGAGAGAAAACATATATATATCAGTAATTTGGAAAATG ATGAGATCTATGAAAAAACACTCTTTGGTATTTTATTTCTTGTTTGTGTTGTCATTGGCTATAGTTAAGCCAACCAAGGGTATCGGGCTGGAGAGATGGCACATCCATATTGTCAATGGCCTAAGCAATAACCAAAACTTGTTTATTCATTGTCAATCCAAAGATGATGATTTAGGGAAAATAAATCTTAGCGTTGGAGCAGAATTCAATTGGAGTTTTAAGATAAACTTTTGGGATACAACATTGTTTTGGTGTTACTTGCAGAAGCCAAATGCAGAGTCTGTGTCATTCGAAGCATTTTGGGTTGAGAGAAAAACGATTTGGCTATTTTATAGATGTTATAAGTCTAATTGTATTTGGACAGCTAAAGATGATGGAGTTTATTTGAAAGACAACCCGGTTAATAGAGATGTTTTGAGAGAAAACATATATATATCAGTAATTTGGAAAATG MRSMKKHSLVFYFLFVLSLAIVKPTKGIGLERWHIHIVNGLSNNQNLFIHCQSKDDDLGKINLSVGAEFNWSFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKTIWLFYRCYKSNCIWTAKDDGVYLKDNPVNRDVLRENIYISVIWKM
BLAST of Cucsa.079060.1 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-37 Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-31 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30 Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.0e-29 Identity = 64/124 (51.61%), Postives = 80/124 (64.52%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TrEMBL
Match: A0A061DNM1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003116 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 6.7e-29 Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 111.3 bits (277), Expect = 5.2e-25 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 110.5 bits (275), Expect = 8.9e-25 Identity = 58/149 (38.93%), Postives = 87/149 (58.39%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TAIR10
Match: AT3G27680.1 (AT3G27680.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 67.8 bits (164), Expect = 6.6e-12 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. NCBI nr
Match: gi|778730341|ref|XP_011659760.1| (PREDICTED: uncharacterized protein LOC105436265 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 3.5e-39 Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. NCBI nr
Match: gi|659116359|ref|XP_008458036.1| (PREDICTED: uncharacterized protein LOC103497573 [Cucumis melo]) HSP 1 Score: 167.5 bits (423), Expect = 1.7e-38 Identity = 77/135 (57.04%), Postives = 92/135 (68.15%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. NCBI nr
Match: gi|778726822|ref|XP_004139670.2| (PREDICTED: uncharacterized protein LOC101212063 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37 Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. NCBI nr
Match: gi|659124369|ref|XP_008462123.1| (PREDICTED: uncharacterized protein LOC103500552 [Cucumis melo]) HSP 1 Score: 161.0 bits (406), Expect = 1.6e-36 Identity = 66/141 (46.81%), Postives = 104/141 (73.76%), Query Frame = 1
BLAST of Cucsa.079060.1 vs. NCBI nr
Match: gi|659124353|ref|XP_008462114.1| (PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]) HSP 1 Score: 156.8 bits (395), Expect = 3.1e-35 Identity = 72/131 (54.96%), Postives = 98/131 (74.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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