Cucsa.073220.3 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCAAGTATGTGAATGACTTTGTTGAAATCACATCTATTGTCTATGTGAATGGATCCTTCCCGACTTGATTTTTACTTGAATTTACTTTtCCCTTTTTTtGTATACTTTACCAGACCTATACCTGAGCTTTGCTTGAAACTCAACGTTTCTGTTTTTACACTGAAACTAGATTCACTCGAGCATAAGTTGGTCTCAGACTCTCAATGCATTTTCAGTGTATGCATGCATAATACTTTAGTAGGAAAGTCTTTGGTTATTAATCTCTACTTCTGGGTTACGCTTTCCACTTTTCTTAAACTTTGTGCTGTTCTTTAAAATGTTCCCGTCTATATTCCTTCTTTCTATCATGTATATTAATCTGTGGACTTTGTTCATCAACTTAAGTACTTCTTTGAAGTTTTCTATAGCATTGAAACTTGACAAAGCTATTCTTAGAAAAAAAAaGGTTGACAAAGCCATTAATTTTCTACAGACAGACTGGGAGGGTGGTTTCTTCCCCCTTACACTCAATTTCAGTGAAGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGCTTCTTCCATCCTAACGTGTACCCATCAGGAACTGTCTGTCTATCGATTCTCAATGAAGATAGTGTAAGTAGTAAATGAAATCTTATGTCTGTATGTTCATTGAAACATCACCTGTCCTATCCTTGAATTTCCTTTGTTCATGTGTAGGGGTGGAGACCAGCCATAACAGTTAAACAAATTCTTGTTGGAATCCAGGATTTGCTGGATCAACCAAACCCTGCTGATCCTGCTCAGACAGAGGGGTATCATCTCTTCATCCAGGTATGTCATATTTTGTTTTTAGATAGGGCAGCGGAAAGCTCAATCCTTGGCCATGAGGGTAGGCTAAGTGTATTCCGTAGTGATATATCTATGCTTGCAGATGTAAAACTAGTGATTTCAAAGATTTTGGGAGTGGTAATGGCGACATTTGGTTCTCAATTTTGTGTGAAGGCATGAGAATCAGAAATCCATGCATATAGCATGTTCAGCTATTGGCATCTGACCTGCTTACTAATGTGTGGGAGTTTTAAGAGACATATTTGTTGGTCAAGGGTGGGGTGTAGTAAATTGAGAAGGCGTAGAAGAAATCAATTAATTATATGATTATCTGTTGTGTCTTTACCCTCTTTACCCTGATTGGTTTAGGGCTTGTTGGCAACTTATTAGTTTTCTATTTTTtGTTTTTGAAAAATAATTTTTAAAAAaCAGATGTGTTTGGTAACTAATTCACCTTTTTGTTTTTCTTTAACCAAGAAACTTGCTTTTAAAATTATGAAGGAAAATTGAAAATGAATAAAAGATACTTAAAAAAAaTACATTTTGTTTTCCCAAAACAGAAAACAAAATCAGTTATTGAACGTATATGTTTTTTTTtAATAAAACAATTTTAAAAACATAAAATACAAAAACAAAAAGTTGAAATGGTTACCAAATGGGCCTTAGTCATCTTTCTTATTCTGTTCCACTATAATTGATGATTCTCCTCGAGTATTACAACCATTGCTGTCTACTTTTGCACACTAATTTTTTTtGTTTATTTCTAAAAATTAATTTTTCAGATGATCTTATCTACATGGTCCTGTGATTTTGAATTTTGTGCAAATTATTTTCGAGGGGGAACATTTTATGTATTTTTTATATTAATTGTTTCTAGATTAGATACAACAAAAGAGGCATACAATATGCATTTCTAGACTGCATGTGATCCTTGAAAGAGAAACTTTGAGAATAGTTGGTTTTCAAAATGGAAAAACTGAAGGGGTCTTGACGGATGGCCGTCCAATTTCCAACTTTCATATGTCCTCATGAGTCATGTGAGTTTCAGTGTCATGTCCCTGGGAAAGGGTGTATGATTCTGGTTCTTACCTATAAACCACTTGATTTGGAGGGATTACTTGAACCATACTCTGTTTGAAGAGATTTCTGACTGCTAGACTGTGTGGTTGGTAGCGGTTATTTTTGTTGAGGCACAGAGGTGTATACTTGAACAAGATGTGTTCTATAGGTTGTATGACCACGCCTTTGAGCTAACTGGCTGAAGAGTGTAATAACACAAGTTTTGTGAATGTGATGGAATTGGATACCTGTCTGACTTCTCTGATTTTCTATTGTTAAATGGAAGAATTTATTCTTGTGCAGGATGCCGTTGAGTACAAGAAGAGGGTTCGCCAACAAGCCAAGCAGTATCCACCTTTGGTGTAAGCTGATTGTGGTTGCCATTAAACTTCTTGAGTACTATGATGATATTAGCAGCCAGTTGCCACTGATTGAATCAACATTTTAAAACTGACTCGTTTTATAGATCGTTGGTATGTGGTGCACATTTCAACTGTCATGATAATCTCTGAAACTTTAGTGTTTCCCAGATATGGAACCAACTTATGTCAATATTTATATTGGTAGACATGTCAACAGCCTGGTGCTGCATTGTGTTCATATTGTGAACTTGTGGTTTCTTGCTCTAAAAAGTGTATGAAAGAAAAGGTTTTTTtCTTAACGTATGGATCAACTGCTACTTGCTTTTATAAAGAATGCCTTTTTTATGTA TATCAAGTATGTGAATGACTTTGTTGAAATCACATCTATTGTCTATGTGAATGGATCCTTCCCGACTTGATTTTTACTTGAATTTACTTTTCCCTTTTTTTGTATACTTTACCAGACCTATACCTGAGCTTTGCTTGAAACTCAACGTTTCTGTTTTTACACTGAAACTAGATTCACTCGAGCATAAGTTGGTCTCAGACTCTCAATGCATTTTCAGTGTATGCATGCATAATACTTTAGTAGGAAAGTCTTTGGTTATTAATCTCTACTTCTGGGTTACGCTTTCCACTTTTCTTAAACTTTGTGCTGTTCTTTAAAATGTTCCCGTCTATATTCCTTCTTTCTATCATGTATATTAATCTGTGGACTTTGTTCATCAACTTAAGTACTTCTTTGAAGTTTTCTATAGCATTGAAACTTGACAAAGCTATTCTTAGAAAAAAAAAGGTTGACAAAGCCATTAATTTTCTACAGACAGACTGGGAGGGTGGTTTCTTCCCCCTTACACTCAATTTCAGTGAAGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGCTTCTTCCATCCTAACGTGTACCCATCAGGAACTGTCTGTCTATCGATTCTCAATGAAGATAGTGGGTGGAGACCAGCCATAACAGTTAAACAAATTCTTGTTGGAATCCAGGATTTGCTGGATCAACCAAACCCTGCTGATCCTGCTCAGACAGAGGGGTATCATCTCTTCATCCAGGATGCCGTTGAGTACAAGAAGAGGGTTCGCCAACAAGCCAAGCAGTATCCACCTTTGGTGTAAGCTGATTGTGGTTGCCATTAAACTTCTTGAGTACTATGATGATATTAGCAGCCAGTTGCCACTGATTGAATCAACATTTTAAAACTGACTCGTTTTATAGATCGTTGGTATGTGGTGCACATTTCAACTGTCATGATAATCTCTGAAACTTTAGTGTTTCCCAGATATGGAACCAACTTATGTCAATATTTATATTGGTAGACATGTCAACAGCCTGGTGCTGCATTGTGTTCATATTGTGAACTTGTGGTTTCTTGCTCTAAAAAGTGTATGAAAGAAAAGGTTTTTTTCTTAACGTATGGATCAACTGCTACTTGCTTTTATAAAGAATGCCTTTTTTATGTA ATGTTCCCGTCTATATTCCTTCTTTCTATCATGTATATTAATCTGTGGACTTTGTTCATCAACTTAAGTACTTCTTTGAAGTTTTCTATAGCATTGAAACTTGACAAAGCTATTCTTAGAAAAAAAAaGGTTGACAAAGCCATTAATTTTCTACAGACAGACTGGGAGGGTGGTTTCTTCCCCCTTACACTCAATTTCAGTGAAGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGCTTCTTCCATCCTAACGTGTACCCATCAGGAACTGTCTGTCTATCGATTCTCAATGAAGATAGTGGGTGGAGACCAGCCATAACAGTTAAACAAATTCTTGTTGGAATCCAGGATTTGCTGGATCAACCAAACCCTGCTGATCCTGCTCAGACAGAGGGGTATCATCTCTTCATCCAGGATGCCGTTGAGTACAAGAAGAGGGTTCGCCAACAAGCCAAGCAGTATCCACCTTTGGTGTAA MFPSIFLLSIMYINLWTLFINLSTSLKFSIALKLDKAILRKKKVDKAINFLQTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV*
BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: SCE1_ARATH (SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 8.3e-55 Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.0e-40 Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hus5 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 9.9e-40 Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38 Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37 Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TrEMBL
Match: A0A0A0LNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428410 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.0e-59 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TrEMBL
Match: Q8L5P9_POPCA (Putative ubiquitin-conjugating enzyme OS=Populus canadensis GN=ubc PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TrEMBL
Match: A9PAA6_POPTR (Ubiquitin-conjugating enzyme family protein OS=Populus trichocarpa GN=POPTR_0005s18460g PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TrEMBL
Match: A0A151SCB0_CAJCA (Sumo-conjugating enzyme ubc9 OS=Cajanus cajan GN=KK1_025756 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 2.8e-57 Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TrEMBL
Match: D7SVT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00160 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57 Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT3G57870.1 (AT3G57870.1 sumo conjugation enzyme 1) HSP 1 Score: 214.5 bits (545), Expect = 4.7e-56 Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT2G02760.1 (AT2G02760.1 ubiquiting-conjugating enzyme 2) HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23 Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT1G14400.1 (AT1G14400.1 ubiquitin carrier protein 1) HSP 1 Score: 104.4 bits (259), Expect = 6.8e-23 Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3) HSP 1 Score: 102.1 bits (253), Expect = 3.4e-22 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT1G64230.4 (AT1G64230.4 ubiquitin-conjugating enzyme 28) HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|449468301|ref|XP_004151860.1| (PREDICTED: SUMO-conjugating enzyme SCE1 [Cucumis sativus]) HSP 1 Score: 236.1 bits (601), Expect = 4.3e-59 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|743925446|ref|XP_011006861.1| (PREDICTED: SUMO-conjugating enzyme SCE1 isoform X2 [Populus euphratica]) HSP 1 Score: 230.7 bits (587), Expect = 1.8e-57 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|1009145341|ref|XP_015890282.1| (PREDICTED: SUMO-conjugating enzyme SCE1 [Ziziphus jujuba]) HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57 Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|224084382|ref|XP_002307279.1| (ubiquitin-conjugating enzyme family protein [Populus trichocarpa]) HSP 1 Score: 229.9 bits (585), Expect = 3.1e-57 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1
BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|1012341244|gb|KYP52450.1| (Sumo-conjugating enzyme ubc9 [Cajanus cajan]) HSP 1 Score: 229.6 bits (584), Expect = 4.0e-57 Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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