Cucsa.068400.2 (mRNA) Cucumber (Gy14) v1

Overview
NameCucsa.068400.2
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionBnaAnng05940D protein
Locationscaffold00707 : 175276 .. 181652 (+)
Sequence length968
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGTGAATTAGACTTTTTAGTAATTTTTCGTCTCATttCTAAAATCCCGTTAAGTTCCAATGTATTAGAAGGGCCTAGCGACTAATGCATATATTTCTTCTTCGTGGAGCTGAAACCACTCTCACCACGCCGACCCTCCAGCAGCCGACCACCAAACGTCACCGTCGCGCGCACCGGAGCTGTCTGCATTAGTTCAGAGCCGCGTCAATCACTCTCTGAACTAACGCGATCTTGTCGTCGGAAGTTGGATCTTGGAGTTTTtGAGTAATGTATTCTTATTTTTGTATATTTTGGTTGGGTTTCTTTAAACTTTTTTAATAGTTTAGGCTTGAGTTTAACCATATCCATTACATTTCGTTGTTAGATTTGAAGTTTTGGAAGAGTTGTGTTGCTGTCCAGCCGATAAGAAGCTCGATTTTTGGCTCTTTTGACATAAATTTGGTGAGAATCTTGGTTTTCTTGAATGGGTCATGGATATCTATTAAGTGTTTGGTGCAAAATTAAATTTATCATGATTTTGGAATGTTAGATTTGAGTTTAAAAGGTCGTTATTATGCTGTCCAGTGGAGTTAAGGTGATTTTGACAAGAGTTTGGTAAGGTTTTTGGCAAATTCAGTGAGTTTTCTTAGAGTCCCTGAGTATCCATTTGGTTTTGACATAAAATTAGTGTTACCCATAATGTTTTGGATGAAAGATTATAGATTTGGAGGATTTTGAAGAAATTTCCAGCAAAGTTTGGTATCTTTTAGGTGTTGTGCTGTAAGTTTTAATGCTTGTTCTGTCAATTTTACAATAGCCATTAAGTATGGTGTTGCTATTTAATTTACCCATAACCTTTGGATGTTAAGGTTGGGACATTGAGGTTATTAAGTAGCTATCTAACAGTTTTAAGATCGCTTTGGCACTTTTTTGGTGAGTATTCATTGGGTTTTGTTTGATCTTGGACACCCATTAGAATTGGTTTGGAATTAATGCTTACTTGTACTTTTTGGGTATTAGTTTTGAAGTTTGTTCTTGGCGAATTTTGGGTCGAATCATTGAGGAAAGTTTGGAATCGGTCTTGGATCAACTTACATTTGGGTAAGTTATTAACGTGTTGTCTAGTTGGTTGAGGTTAATTTTGACAAGATTTTGGTAAGTAATTGAGGTTTCATAACTACTCGAAGTGTTAAGTGTGCTATGATTTAAGTTACAATTCTTGGTTGTGGTTTTCTTGGAGGTTTTTGAGTACCCATTAAGTTGTGGTGCTAATTTTGTTTtACTTGCTAAATTTTGAGTTGGTTAAGTTTACAACTCTATTCTTGGTTGTGAGAGGACCCCCCACTCTCAACACACAGGGAGAATATCTATACTATTCTTCTAGGTGGTCCCTATCCCTTACAGTTCCTGCGCCCGAATTGCTCTTTCCTCTCCTCCTATACTGATGCATGATTGGTAGCCTAACACTTTTACATCTTAAGATACTGTTGAGCTATAACTATAACATACTGTTGTTTAAAGTTATTGATGAAATGTTCTTTGTCTTCTCCTTTCAGAATTCCTCAATCCATTCCTAAAGCTCAGGTCAACCACTTGTTAGAGCTTTAAAAAATTGATCGAAAAGTATGCCACACCGAACACGACCTATGACCGCGCTTCTTGTATTTACTGGTCTGAATGTTGTGCTGGTATCAACCATCACCCCGGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGGTATTTTCTATTATCATTTCCAAGTTATTTGCTTCATATCAAACTAGCACTTTTGTAGGGTTCATCATGTTGCTTTTATGTACAGTTTATGTGCTTATTATACTAATGGTAAAAATGTAGTGTTCTGTGTTTGGTGTTGATTCTCATTGGCATTGTTGGTCATTTTACCTTTAAAGTGGTGATATGATATGTGAACTAGGATATGATACTATGTTAGGTTTTACTGAGGGGATTGTTTGGTTTCTAGTTGTGTGAGAATTGGAGTTTGTCACTTGTATGAGAATCTTATAGTTGTGGAATTGGATTTTCAATACAAATATGTACGATGTACTAGAAGAAAGGGGAGGGGgAATATTTTGGAGTAAACtATTTTATTTtAATaaAAAAAAAAAAaTGATTTCATTGATGTATGAAATAAACCAAAAGGATGGATAGTCCATGATAATTACTAAAAGATTTCTCATTTGGATACAAAGGAAGCATACGATTTCATATGACCAAAATGCTAGACAGTTTACACcAACAGATAACATAGTGGATGATGACCAACGTCTGACCAACAAAATCTTAATAAAAGAAAATAAGAGGAAGTCGGATGGTGAAGACCAATCTAAGAGTCGAAGAAGAGAACATTTCCCTTTATGCCTAAAATTGAACCACGGTAAGAAAGATATCCCATTGAATTCATACAATCATTTTAATTGAAAGTAGTGTTAAAAACAAAGGGGAGACTGATCCCTGGACCTTAAGGTGTATGCGTGCAAGAAGTAATGGAAGGGGCCTATCGCTGATGAGTGAGTGTTGTGCTGTTATGGGGCTCTAAGTATTGTTGTTAGTTGTTTGGCAAAATTATGGGTAAGGAAGGGAGAAGGGAGCTGATAGAACACCAGAATATGTGTTCTGGTATATTGATATATTGCTCAAACGATTACAAAAAGAGAATTGATATTTCAATTCTTACTAATCAAACAGAAATAAGAGCAAACAAGAAAACTCAGTAAACCTCTCTGCCCTCATCACTCTCAAGGAAATTGGCAGCCCACCCCTCACTATCAAAAATGATCTCTCTTCTTCTCTCCCCCTTCCTTCTCTTTTACACCTTTTCACGTAACTAATTATGGTCCCCACCAAAGTGGTTTCCACCCATACTATTTTCCCCTTTATCTGCACATGCTACTTCCTTCTTCTTCCTTCTACTATATTGCAAAAGGATTGGTGGTCTATCATTACTCTCCTCCAAACTTTTCTTGTACTATCCGGAGATGTTCTTTTACTGCTCCCAAAATCACGTCCCTTTCCTTTAGTTGCTGGTCCAGTGTTTAATTGGGTGTCTTCATGTCTCTATTATAAAGGAGTGTTGGTGGTAGCCAACCATAAACAACCTGGAAAGGTGTTATCCCAATTGAACGTTGATACATAGTATTGTACCAATACTCAGCCCAATGCAGCCAATTTGTCCACTCTCTCAGCTTCTCTCCATAGAAACATCTCGAGTGTGCCTCAACTCCTCTGTTCACTACTTCTATTTGTCCATCTGATTGTGAATGATAAGCAAATGATAAGCAGAACTTCTATTCAATTTAGTCCTCGACAGTCTAAACATCTCCTTCCAGAAATTACTCAAAAAGATGGAAATATTTACCCTAATTCCTAAATCTTTTCTTTCTTTTATTTCCTTGTGTATTTTATTTATTCTCCTCGTTGTACCTATTGTAAAATTCACTAGAAAATACTAACAAGAAAAaTATCGTAGTTTTTCTCTTGATAACTCGGGTTTCCACGTAAACCTGTGTGTTCTTTGTTTTTACTTCCAATTGACCATTTATAAGCTCCTGCCTTTAAGAACTGAGTTAATGGTGTACCCACACTGCCATAATTCTTGACTAATCTTCTATAACACCCTGCAAGACCGAGGAATCCTCTTACTTCTCGCACATTAGTTGGTATTGGCGACTCTTTAATGGCTCAATTTTTTTTCAGGATCTACCTCCACCCCTTTTCTTGAAATTATATGGCCCATATACTCCACTCTTTCCTTTGCAAAACCACATTTATTCAGATTGGCGTATAATTCGTGCTCCCTCAATATTTCCAACAATATTTCCAACACTAACTCCCAAGTGTTGAAGATGTTCCTCTAAACTTTTGTTGTAGATCAGAATCTCATCAAAGAAAaCCAAGACAAACCTTCTGAGATACGGTTTAAATATTGTGTTCATCAGTGGCTGAAACGTAGACAGTGGATTTGTGAGGCCAAAGGGCATGACAAGGAACTCGTAATGGCCCTCATGAGTTCTATATGCAGTCTTCTCCACATCTTATTTGCACATCCGAATATGATGATATCCAGCCTTGAGATCAATCTTCAAAAACATGTTAGCTCTATTTAATACGTCAAATAATTCTTCTATAATGGGAATGGGAAACTTGTCAAGAAAAGTCACATTGTTTAATGCTTGGTAGTTCATATAGAATCTCCAACTTCCAGCCTTCTTTTTCACTAGCAACACTGGACTGGAATAAGGACTAGTACTTGTTCGTATTATCCCTGAGGCCAACTTCCCATCTCCTCTTTTTGTTGATAGGCGTATCTGTATGGTCTGACATTTACTGGGTCAGTTCCCTTCTTGAGGTGTATATGGTGTTCAATGCTTCTCCTTGGTGGTAATTCTCCTGGCCACTCAAAAACATCTTCAAACTTGGCAAACATTGTTGGTATAGATTGCTTAACTGTAGGGACTTCATTAACTCCATACAGTTCTGCAAATGAAATTCCTCCCTCCATGGCTCGACATTCTATTTAGTATCCTTGATCTATTGTTGTCCGTGTCTTCATCATATGCTTCAAACTTACTCGAGCGTTCGTTAGACTAGGATCTCCCCTTGTGACGATCTTTTGTTCATTATGGCAAAAGGTTAATGTGAGGCTTCTCCAGTCAACTTCCGTCACCCCCAGTGAGTGCAACCACTGCATTCCAAGTATTACATCCACTCCTCCGAGTTCTAATGGTAGGAAATTGTCAATGATCTTCCAATCTCCTAGAACTAGTTCTATTTTGCTACAAATTCCTTTTCCCTTCACAGTTGTGCCAAGCCCAAAATGACTCGTAATTAGAGGTTTCCTCCATTGGCAGATTTAACTGATTCACCAACTTCTCTAATATGAAGTTATGTGTCTCTGCAGTCTATCAAGACCACTACTGCCTTCTCGTTCATCACCCCTTTCACTTTCATTGTGTCTGGATTAGTTAATCCCACCCCTGAATTCAAGGATAACTATACCACCGGCTTATTATTCTCTTCAACTTCTTTTTCATCTTAGTTGCTTCCGCATAGTCTTCTTCAATAACTTCCAATTTCTCCCCATTTGCCCAGACTACAGAACTCTGAGTTCTTTTGTTTTTTtACTTTACATCGATGTCCGGCATAATATTTCTCTTCACAACGGAAGCAGAGTTCTTTCTTGCGTCGGGCTTGGAACTCCTCATCGGACAACCTCTTTGATGATCCTTCCTGCCGGTTGTTGCCTGCCATCACTCCGCTCAGTGTAATTGTCCTCATCGGAAAATTTCCTCCAGACATTGTCTCATTTGAAGTAATCAGCAAATTCGTTTTAAAAGAATTAGGTGATTGGGCCTTACCTTCCACTGCTTGCTTGAAGCCCGCTTCACTTCTAATCACCTCCAGGTACTCAATTTTCTGGGTTGCTGGGCTATCAGGAGCCTATGAGTTAGGTTGCTGAGCTCATTATGTAATTTCATACTTTCAATGAAATTGTTTCTTATTTCAGAAAaAAAAaCTGAAGTATTGGGATAGAACCCTCTGATCTTCATTGACTCTTCTTATCTTTCGTGAATATGAACCAGTACACATCAAGAACATGCTTTTAGTTTTATAAGAAAGAATGTTATAAAATAACGTTAAACTATCCTGAAAACAGTTTTTCTAAACAGCTCCTGTACTTCTCCCGCCTTGAGATCGGGATCCTGTCCTTTATTTATCTTGTCATTGAAATTAATGTTGTTTCATATCTTGTATGTACCACATTTAATGTCTTAGCTATTTTGGTTTGCTCTTACCCACCCGCCTGTTTGTGAGTTTTTTGGTTGCATCCACAAAACCTGTTAATAACATCCATTTTACTAATACCAGATCAATAACTTCCAAACACAATCTCAGTTTTTTTtAATGGATGTTCTCATATTCTGGCTGCAGAGAGAACGACGTCGGCAACAACGTGAAGCTGCTTTAGGGAAAGAGCTTTTAGCAGACAGATAAACATATGCAGTACCTTTGAGAATTGTACATTACATCTAAGTTCCCCATACTCATCTTTTTAGGTGGGATTTTCTCTTATCCTCTTCATCATTCAAGAATTGAAGATAAGAATGGGATAAGAAAGCCCTTTATTACTTGCCATCTGCAGGATTTATTGTCCACCGATTGCAGATTGTTGGAAAAGACACAGAACTGGACCATTGAATTCACAAGCTATCTTGATTGATATGTCATAATCAAACTACCTTCTGTTCTGTACACTTTCTCTTTTTGTTAATATCTGCTTTGCTTGAGCACCCTGCTTTCCAATGATACAGATAGTTTACACTAAGTTCATAAGTCTTCCACATGACATTTTGACAAAATAGGGC

mRNA sequence

AATGTGAATTAGACTTTTTAGTAATTTTTCGTCTCATTTCTAAAATCCCGTTAAGTTCCAATGTATTAGAAGGGCCTAGCGACTAATGCATATATTTCTTCTTCGTGGAGCTGAAACCACTCTCACCACGCCGACCCTCCAGCAGCCGACCACCAAACGTCACCGTCGCGCGCACCGGAGCTGTCTGCATTAGTTCAGAGCCGCGTCAATCACTCTCTGAACTAACGCGATCTTGTCGTCGGAAGTTGGATCTTGGAGTTTTTGAATTTGAAGTTTTGGAAGAGTTGTGTTGCTGTCCAGCCGATAAGAAGCTCGATTTTTGGCTCTTTTGACATAAATTTGAATTCCTCAATCCATTCCTAAAGCTCAGGTCAACCACTTGTTAGAGCTTTAAAAAATTGATCGAAAAGTATGCCACACCGAACACGACCTATGACCGCGCTTCTTGTATTTACTGGTCTGAATGTTGTGCTGGTATCAACCATCACCCCGGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGAGAGAACGACGTCGGCAACAACGTGAAGCTGCTTTAGGGAAAGAGCTTTTAGCAGACAGATAAACATATGCAGTACCTTTGAGAATTGTACATTACATCTAAGTTCCCCATACTCATCTTTTTAGGTGGGATTTTCTCTTATCCTCTTCATCATTCAAGAATTGAAGATAAGAATGGGATAAGAAAGCCCTTTATTACTTGCCATCTGCAGGATTTATTGTCCACCGATTGCAGATTGTTGGAAAAGACACAGAACTGGACCATTGAATTCACAAGCTATCTTGATTGATATGTCATAATCAAACTACCTTCTGTTCTGTACACTTTCTCTTTTTGTTAATATCTGCTTTGCTTGAGCACCCTGCTTTCCAATGATACAGATAGTTTACACTAAGTTCATAAGTCTTCCACATGACATTTTGACAAAATAGGGC

Coding sequence (CDS)

ATGCCACACCGAACACGACCTATGACCGCGCTTCTTGTATTTACTGGTCTGAATGTTGTGCTGGTATCAACCATCACCCCGGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGAGAGAACGACGTCGGCAACAACGTGAAGCTGCTTTAGGGAAAGAGCTTTTAGCAGACAGATAA

Protein sequence

MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR*
Homology
[Close]
BLAST of Cucsa.068400.2 vs. TrEMBL
Match: A0A0A0KYV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G431930 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.9e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR 62
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR
Sbjct: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR 54

[Close]
BLAST of Cucsa.068400.2 vs. TrEMBL
Match: M1AFB9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401008361 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-20
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAAL 54
          MPHR RPM  LL+FTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQ+REAAL
Sbjct: 1  MPHRARPMAGLLLFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQEREAAL 53

[Close]
BLAST of Cucsa.068400.2 vs. TrEMBL
Match: A0A0J8CSZ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062970 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.0e-20
Identity = 46/59 (77.97%), Postives = 55/59 (93.22%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLA 60
          MPHRTRPMTALL+FTGLNVVLVS+ITPVYD+VCFHPYWERRRE RR +REA++ K+ ++
Sbjct: 1  MPHRTRPMTALLLFTGLNVVLVSSITPVYDYVCFHPYWERRRETRRMEREASMRKDSMS 59

[Close]
BLAST of Cucsa.068400.2 vs. TrEMBL
Match: A0A068ULZ7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028997001 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.8e-20
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGK 56
          MP+RTRPM ALLVFTGLN +LVSTI PVYDFVCFHPYWERRRERRR++REAAL K
Sbjct: 1  MPNRTRPMAALLVFTGLNAILVSTIEPVYDFVCFHPYWERRRERRRREREAALAK 55

[Close]
BLAST of Cucsa.068400.2 vs. TrEMBL
Match: K4D284_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.8e-20
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAAL 54
          MPHR RPM  LL+FTGLNVVLVSTITPVYDFVCFHPYWERRRE RRQ+REAAL
Sbjct: 1  MPHRARPMAGLLLFTGLNVVLVSTITPVYDFVCFHPYWERRREHRRQEREAAL 53

[Close]
BLAST of Cucsa.068400.2 vs. TAIR10
Match: AT5G09225.1 (AT5G09225.1 unknown protein)

HSP 1 Score: 93.2 bits (230), Expect = 6.0e-20
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAA 53
          MPHRTRP+  LL+FTG+N VLV TITPVYDFVCF PYWERRRER RQ+REAA
Sbjct: 1  MPHRTRPLKGLLLFTGINFVLVQTITPVYDFVCFLPYWERRRERIRQEREAA 52

[Close]
BLAST of Cucsa.068400.2 vs. NCBI nr
Match: gi|778694737|ref|XP_011653856.1| (PREDICTED: uncharacterized protein LOC101220293 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of Cucsa.068400.2 vs. NCBI nr
Match: gi|659111357|ref|XP_008455709.1| (PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo])

HSP 1 Score: 125.2 bits (313), Expect = 4.1e-26
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60
          MPHRTRPM ALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREAALGKELLAD
Sbjct: 1  MPHRTRPMAALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREAALGKELLAD 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of Cucsa.068400.2 vs. NCBI nr
Match: gi|700199555|gb|KGN54713.1| (hypothetical protein Csa_4G431930 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR 62
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR
Sbjct: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR 54

[Close]
BLAST of Cucsa.068400.2 vs. NCBI nr
Match: gi|697128932|ref|XP_009618520.1| (PREDICTED: uncharacterized protein LOC104110688 isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-21
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAAL 54
          MPHRTRPM ALL+FTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQ+REAAL
Sbjct: 22 MPHRTRPMAALLLFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQEREAAL 74

[Close]
BLAST of Cucsa.068400.2 vs. NCBI nr
Match: gi|697128934|ref|XP_009618521.1| (PREDICTED: uncharacterized protein LOC104110688 isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-21
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 1 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAAL 54
          MPHRTRPM ALL+FTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQ+REAAL
Sbjct: 1  MPHRTRPMAALLLFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQEREAAL 53

The following BLAST results are available for this feature:
BLAST of Cucsa.068400.2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYV7_CUCSA1.9e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G431930 PE=4 SV=1[more]
M1AFB9_SOLTU1.8e-2090.57Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401008361 PE=4 SV=1[more]
A0A0J8CSZ6_BETVU4.0e-2077.97Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062970 PE=4 S... [more]
A0A068ULZ7_COFCA6.8e-2085.45Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028997001 PE=4 SV=1[more]
K4D284_SOLLC6.8e-2088.68Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cucsa.068400.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09225.16.0e-2080.77 unknown protein[more]
BLAST of Cucsa.068400.2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778694737|ref|XP_011653856.1|3.7e-27100.00PREDICTED: uncharacterized protein LOC101220293 [Cucumis sativus][more]
gi|659111357|ref|XP_008455709.1|4.1e-2696.72PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo][more]
gi|700199555|gb|KGN54713.1|2.7e-22100.00hypothetical protein Csa_4G431930 [Cucumis sativus][more]
gi|697128932|ref|XP_009618520.1|2.3e-2194.34PREDICTED: uncharacterized protein LOC104110688 isoform X1 [Nicotiana tomentosif... [more]
gi|697128934|ref|XP_009618521.1|2.3e-2194.34PREDICTED: uncharacterized protein LOC104110688 isoform X2 [Nicotiana tomentosif... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.068390Cucsa.068390gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.068400.2Cucsa.068400.2-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.068400.2.five_prime_UTR.1Cucsa.068400.2.five_prime_UTR.1five_prime_UTR
Cucsa.068400.2.five_prime_UTR.2Cucsa.068400.2.five_prime_UTR.2five_prime_UTR
Cucsa.068400.2.five_prime_UTR.3Cucsa.068400.2.five_prime_UTR.3five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.068400.2.CDS.1Cucsa.068400.2.CDS.1CDS
Cucsa.068400.2.CDS.2Cucsa.068400.2.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.068400.2.three_prime_UTR.1Cucsa.068400.2.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36392FAMILY NOT NAMEDcoord: 2..61
score: 8.0