Cucsa.063760.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACCACTTTTTTCCCATCACAACATTTCTAGAAGATGCGGAAATTAGTGGGGGCTGTTCTTATTTCCTTTTTCTTGCTCTCCGTTTTCAGTATTTCATCCCCAGGATTTGGAAACACCTTCATCTCTAAATTCAATTTATTAACCCCAAAGTTTTCCTCGCGTATTCATCGCTTGTATCATCATTCCCATATATTTGGACCAAGGTTGTTACTTTTTGTTTTTTTTTTTTTTTATCCCTTATTCTTTTACACCCACAATTGAAGTTTTTCATATTGGATGAAGTATTTTAGATACTTAAGTTTGGGATTCTGTTTTGAGCTGATGTTGTATGTTAACTCTTTACTATGAACTAATTGTTTGATTGAATGCGCAAATGAGACTTTTTTTTCTTATGTTCAACTTCTTGTGCAGAGTATTAGTTAGAGGCCATTCGAATATAGTTGTTAGAAGTTTGAAAATGGGAAAGGGGAGTTATGTTGACGGGCCTTTGCAAGAGGAGTTTACATTTCCTGCCAATTCTGTTCCTTTCAACAACTGTCATGCTTCTACAATTGTGGAGGTTTGGTTTGATGAAGAAACTTCATTTGGTCTTATAATAATTGGATCCCTGATTTTGTTAGAGGAGAATCCGAGTGTTTTCTTTTTTAATAGAGCAGGTTGATAAGGATCATTACTTGGTTGCATATTTTGGTGGTACATTAGAGGGCGCACCGGATGTGAAGATTTGGTTGCAAGCTTTTAAGGTAAGCAAGCCGATCCGATTTTATCACTCCTCAATACCATTTAATTGCTAAACAAGCATAATTTTTCAGAAACCGAAAACCAAAAACAAGGGTTATGCAAGAGGATCTAAACACTTTATTCTCATCTGAGTTATGTTCTGCTTGCTTGCTGATGTGATTTCTCAAACTATACTTCTATAAAATTTACTCTCTCTCCTTGCCTTTGTTTATGTCACAAAACTCACAACAGGCTGTTGGCCTTTGTCCATACTTCTTACAATATTGAGTGGCTTAGGAGATATTTGTATTACTTTTAACTTTCCTCATTGATGTTCATTTCTGGCTAGATTGTCCACCCATAATTTTTTTCTAGCATTCATTAGAAGGGCTGTTAACAATTTTACTCAAGTTATGAAGACATAGTTGGACAAGCAATAACTCTTTTTTATCTTGCTAGCAATAACTCTTTTTTATCTTGCTATTCCCACGTTGAGTCCGTTATCTCTGCAATGATATTTTGTTAAAATTATAATTTGCAGAATGGCTCCTGGCACTCCCCAATTGTGGCTGATGAGGAGCCTGACATTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCGTCAGATGAGCTGCTTCTGTTTTATAAAGTGGGCCAAGAAGTTCAAAAGTATGACAGTTTTAAGCTCATAATGGTTCTCTGAAATAACAGCTCTGGACATATTCATTGATTTTTCTTTATATTTGTTTCGAGTTTCAATTGATTTATTGGACCTCCCGTGGTGCAGTGGCGTTGTCTTTACATCTAGCAATTTGTGGGATATGATTTGAAATTCATGTCATTTGATAACATCATTTATCATATCGGAAAGTTCAGTATTGGGGCCGACAAGCCCTGTATAATTCTTAATCTTTAACAGGCCAACAAGAACTACCAAGGCTATATATAAGGTATCTCAAATAAAATGATCTTAGGAAGCAGATATGCTCACGTTAGCTGGTTTGATTAATTAGATTTTGAATTTTCTAGAAAGAGCCTCAATACCTTTTCCTTGAAATCCCAGGGCACCCTTTTTTTACTGGTTCACTCTAGTCTCCAATGCCCAACTTTCTAACATATTGAATAACTTTTTGTGTGAAAAGTTAAACCCTTCTGCTTGCAAATTTGTTTCATTGTATCTTATGCTGATGGAGATAACAATCAGATGGAGTGGGTGCATGAAGCGGTCATATGACAAAGGCATTACTTGGACAGCGAGAGAACAGCTTCCTCCTGGTATCTTAGGACCAATAAAGAATAAGGTATAATATATGTGCTGATATCTACCAATTCAGTTAAACTGTTTTCGCTCAAGAAACTGTCTTTTCTTGTCTGATGCTGTAGCCAATCTTGCTGGAAAATGGAGTTTTACTCTGCGGATCTTCAGTTGAAAGTTGGAACTCTTGGGGTGCATGGATGGAGGTTATTATGAATAGTTCTTTGGTTTTCGCTTGTCTCAAAATCTGGAAAATGTGGCTGACATGTCAATATAACAGGTCACATCTGATTCAGGTAGGTCATGGAGAAAGTTTGGCCCAATATACATGAAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCTTACCAGACTGCAAATGGAAATCTGCGGGTTTTACTTCGATCCTTCACAGGTATCGATAGTATTTGTATGTCAGAATCCAATGATGGTGGTCACAACTGGAGCTTTGCAATACCTACAAATCTTCCTAATCCAAACTCAGGTAACATGGCAGAGCTACATGCATTACCTGTAACTGTAAGCATCTGCATACTATTAGGAATATTAAGGGTACATTAGTAGGTAGACAGGGAGGCGGTTATCGAGTTTAGTTATAAATAGTGGGAGATAGGCATTTAGTGGTTGGGCTTGAGAGTGATCTCAAGAGAGGGTGCAAGTACCTTGAATAACTAGTTTCTATTAAATTCTTCTTGATATTGCAATATATTAATTTGATATGTTTTATGTGTTTGAATTACTAACACAGACATGAACTTTTAAGCGCATTGATTCAGTCTCGCGAGAATCTTCATTATGAAATTGGATAACTTCCCAAATTTAGCAATTACTGATCTTATAAGCTCTATTCATTCTGCACAAGTGGAGAAGGCTGATCTTACAACTAAGATTCCAAGTTTCCAACATCTCATCTTTGAGTATGTTACCTTATCTATAGGTATTGACGGAGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACGGTATCAAGAGGTGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGACTCATGGCAAGATGTTATGACCTTGGAGGATGAGCCAGAAAATGAATTTTCATATCCAGCCGTCATCGAAGCTAGTGATGACTCAATTCACATCACATACACATACAGGAGAAAGCAGATTAAGGTATGAAGAGGTTGATTATCTAATCCAAAAGATAAATTCATGACCAACAAGTTTCTGTCATTGCCTACTTTCCCCTTCTCCATTGATTGCTCTGTTAGTTTTGAAATTTCTTAACCTATGATTCTTTTGAGCAGCATGTTGTCTTCAAACTGAAAGTGCATGAGAAACATTAACGATGATAACTAAGGAAGCAAAGCTCTGTATCAGTTGGAAAGAGTTAAATGAGCAAGGCCAATAATCTGCAACATCCAAACTCTCTAATCTTGGAATAAAATGCTGAGTTACGGAGCACCATTTGTACATTTGGGTGTGATTGTTTCCTTCATGTGGTGTATTCATCAAGA TGACCACTTTTTTCCCATCACAACATTTCTAGAAGATGCGGAAATTAGTGGGGGCTGTTCTTATTTCCTTTTTCTTGCTCTCCGTTTTCAGTATTTCATCCCCAGGATTTGGAAACACCTTCATCTCTAAATTCAATTTATTAACCCCAAAGTTTTCCTCGCGTATTCATCGCTTGTATCATCATTCCCATATATTTGGACCAAGAGTATTAGTTAGAGGCCATTCGAATATAGTTGTTAGAAGTTTGAAAATGGGAAAGGGGAGTTATGTTGACGGGCCTTTGCAAGAGGAGTTTACATTTCCTGCCAATTCTGTTCCTTTCAACAACTGTCATGCTTCTACAATTGTGGAGGTTGATAAGGATCATTACTTGGTTGCATATTTTGGTGGTACATTAGAGGGCGCACCGGATGTGAAGATTTGGTTGCAAGCTTTTAAGAATGGCTCCTGGCACTCCCCAATTGTGGCTGATGAGGAGCCTGACATTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCGTCAGATGAGCTGCTTCTGTTTTATAAAGTGGGCCAAGAAGTTCAAAAATGGAGTGGGTGCATGAAGCGGTCATATGACAAAGGCATTACTTGGACAGCGAGAGAACAGCTTCCTCCTGGTATCTTAGGACCAATAAAGAATAAGCCAATCTTGCTGGAAAATGGAGTTTTACTCTGCGGATCTTCAGTTGAAAGTTGGAACTCTTGGGGTGCATGGATGGAGGTCACATCTGATTCAGGTAGGTCATGGAGAAAGTTTGGCCCAATATACATGAAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCTTACCAGACTGCAAATGGAAATCTGCGGGTTTTACTTCGATCCTTCACAGGTATCGATAGTATTTGTATGTCAGAATCCAATGATGGTGGTCACAACTGGAGCTTTGCAATACCTACAAATCTTCCTAATCCAAACTCAGGTATTGACGGAGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACGGTATCAAGAGGTGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGACTCATGGCAAGATGTTATGACCTTGGAGGATGAGCCAGAAAATGAATTTTCATATCCAGCCGTCATCGAAGCTAGTGATGACTCAATTCACATCACATACACATACAGGAGAAAGCAGATTAAGCATGTTGTCTTCAAACTGAAAGTGCATGAGAAACATTAACGATGATAACTAAGGAAGCAAAGCTCTGTATCAGTTGGAAAGAGTTAAATGAGCAAGGCCAATAATCTGCAACATCCAAACTCTCTAATCTTGGAATAAAATGCTGAGTTACGGAGCACCATTTGTACATTTGGGTGTGATTGTTTCCTTCATGTGGTGTATTCATCAAGA ATGCGGAAATTAGTGGGGGCTGTTCTTATTTCCTTTTTCTTGCTCTCCGTTTTCAGTATTTCATCCCCAGGATTTGGAAACACCTTCATCTCTAAATTCAATTTATTAACCCCAAAGTTTTCCTCGCGTATTCATCGCTTGTATCATCATTCCCATATATTTGGACCAAGAGTATTAGTTAGAGGCCATTCGAATATAGTTGTTAGAAGTTTGAAAATGGGAAAGGGGAGTTATGTTGACGGGCCTTTGCAAGAGGAGTTTACATTTCCTGCCAATTCTGTTCCTTTCAACAACTGTCATGCTTCTACAATTGTGGAGGTTGATAAGGATCATTACTTGGTTGCATATTTTGGTGGTACATTAGAGGGCGCACCGGATGTGAAGATTTGGTTGCAAGCTTTTAAGAATGGCTCCTGGCACTCCCCAATTGTGGCTGATGAGGAGCCTGACATTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCGTCAGATGAGCTGCTTCTGTTTTATAAAGTGGGCCAAGAAGTTCAAAAATGGAGTGGGTGCATGAAGCGGTCATATGACAAAGGCATTACTTGGACAGCGAGAGAACAGCTTCCTCCTGGTATCTTAGGACCAATAAAGAATAAGCCAATCTTGCTGGAAAATGGAGTTTTACTCTGCGGATCTTCAGTTGAAAGTTGGAACTCTTGGGGTGCATGGATGGAGGTCACATCTGATTCAGGTAGGTCATGGAGAAAGTTTGGCCCAATATACATGAAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCTTACCAGACTGCAAATGGAAATCTGCGGGTTTTACTTCGATCCTTCACAGGTATCGATAGTATTTGTATGTCAGAATCCAATGATGGTGGTCACAACTGGAGCTTTGCAATACCTACAAATCTTCCTAATCCAAACTCAGGTATTGACGGAGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACGGTATCAAGAGGTGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGACTCATGGCAAGATGTTATGACCTTGGAGGATGAGCCAGAAAATGAATTTTCATATCCAGCCGTCATCGAAGCTAGTGATGACTCAATTCACATCACATACACATACAGGAGAAAGCAGATTAAGCATGTTGTCTTCAAACTGAAAGTGCATGAGAAACATTAA MRKLVGAVLISFFLLSVFSISSPGFGNTFISKFNLLTPKFSSRIHRLYHHSHIFGPRVLVRGHSNIVVRSLKMGKGSYVDGPLQEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTLEGAPDVKIWLQAFKNGSWHSPIVADEEPDIPMWNPVLFKLPSDELLLFYKVGQEVQKWSGCMKRSYDKGITWTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIYMKNRSLSVIQPVPYQTANGNLRVLLRSFTGIDSICMSESNDGGHNWSFAIPTNLPNPNSGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLEDEPENEFSYPAVIEASDDSIHITYTYRRKQIKHVVFKLKVHEKH*
BLAST of Cucsa.063760.1 vs. TrEMBL
Match: A0A0A0LWB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G295130 PE=4 SV=1) HSP 1 Score: 683.7 bits (1763), Expect = 1.3e-193 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. TrEMBL
Match: D7MNU9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495867 PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 3.4e-149 Identity = 249/309 (80.58%), Postives = 275/309 (89.00%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. TrEMBL
Match: B9T0H5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0729430 PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 3.4e-149 Identity = 249/319 (78.06%), Postives = 281/319 (88.09%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. TrEMBL
Match: F4KC30_ARATH (BNR/Asp-box repeat family protein OS=Arabidopsis thaliana GN=At5g57700 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 2.9e-148 Identity = 249/326 (76.38%), Postives = 285/326 (87.42%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. TrEMBL
Match: Q8LFU2_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 3.8e-148 Identity = 246/309 (79.61%), Postives = 276/309 (89.32%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. TAIR10
Match: AT5G57700.3 (AT5G57700.3 BNR/Asp-box repeat family protein) HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-151 Identity = 249/326 (76.38%), Postives = 285/326 (87.42%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. NCBI nr
Match: gi|449464334|ref|XP_004149884.1| (PREDICTED: uncharacterized protein LOC101219119 isoform X1 [Cucumis sativus]) HSP 1 Score: 824.3 bits (2128), Expect = 9.0e-236 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. NCBI nr
Match: gi|659107416|ref|XP_008453663.1| (PREDICTED: uncharacterized protein LOC103494313 isoform X1 [Cucumis melo]) HSP 1 Score: 776.5 bits (2004), Expect = 2.2e-221 Identity = 370/382 (96.86%), Postives = 376/382 (98.43%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. NCBI nr
Match: gi|659107418|ref|XP_008453664.1| (PREDICTED: uncharacterized protein LOC103494313 isoform X2 [Cucumis melo]) HSP 1 Score: 696.4 bits (1796), Expect = 2.8e-197 Identity = 332/342 (97.08%), Postives = 337/342 (98.54%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. NCBI nr
Match: gi|778660367|ref|XP_011656129.1| (PREDICTED: uncharacterized protein LOC101219119 isoform X2 [Cucumis sativus]) HSP 1 Score: 683.7 bits (1763), Expect = 1.9e-193 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 1
BLAST of Cucsa.063760.1 vs. NCBI nr
Match: gi|802633442|ref|XP_012077477.1| (PREDICTED: uncharacterized protein LOC105638296 isoform X1 [Jatropha curcas]) HSP 1 Score: 565.1 bits (1455), Expect = 9.9e-158 Identity = 270/400 (67.50%), Postives = 317/400 (79.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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