Cucsa.054690.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.054690.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	DNA polymerase epsilon subunit 2
Location	scaffold00585 : 227296 .. 238217 (-)
Sequence length	2522

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGGTTCGGATCCGTAGTAGTCTTTTCTTCTTCTTCCTATTCATTTGTTCTTTTTCTTCCTTTAACTGAAAACCTTTAACTGCGTTTTCTTGTTGGACTGATTACAATTGTATCTAGTAGAGCCAAAAAAGAATTTCGTCGTGAATCAACCCTCCATTTTCCAACCCCATCATCATTCCTTCACAATTATTGTGCAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTGTACTGTTCCTTCTTCTTTCATACTACGATTATATCTTCTTTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGTATGGTTTTCTCCCATTTATATTTATTTTTAATAGTTGTTAAACTAAGCATACCTGGTTAAGCATATACCTTGGGCCAAGAAGTCAGCAAAATCTCTCATTCCCATGTGTTGTTGAATACTTGAACTAAAAAAAAACTACTAGTTGGGTTTTTGGGATAATTAGACGCGGATAACTAATGCAGCTCATTGCAAAAAAGAGAGATATAATGGATTTAACTGAGAACTATCATCATCAACATTCCTTTTCTCTGCACTTGAAATCACATGTTCTTGAACCATGTACATATATATTTTTAGGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGGTACTCCATTTCTCTTGACCTATGAATTGATCATGTTAGCCTTTACAATTGAACATGAGCATTTACACTAATTTTGTTTGTGATGTGTTTCCCAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAATCTGAACTTGTTTGATATTTGAAGATGACATGCCCTGCAGTTTTCATTAATAGTTAGCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTTGTAGTACCACGTTTGCCTTCAAGTTCTGTATAAATAGGTGGTTGAAATTTCCCCTTAGTGTCCTATTAGGTATTTCTAAACCCCCTTGTTTATAGAGAGAACTTACTTTCTTAAAGACATATGTAGCGTTCATTATTCTATTTTCTCTACGGATCATCCAGTTTTCCTATTAGCTGTTGCCAGGATGTACTTTGCTTACGAAGTTTTCATATTTGATCAGATTATTATGCTTGGTTACCCTTTTAAAAGGTATTATCTTTGCATATTTCCCTATATTCTTTTCAAAAAAGCTTTGCAGTTTTGGCACTTTTAATGTATAGCAGTATTTTGTTTATACTGTAACTGCTTCCTAAGTTGAACGCTTTTTGAAGTTCTTACATGCTTATGAGATGATTTTTTTTTTACAATGCTATGGGATGGATCTTAGTTCTGTTTGGTCCTGATCAGAGTTTTGTGTAAAGATACTACAGAAATATCTTGATATATTGCTATTCCTCAACGATTACAATATGAAAATACTATATGAAACAGTAAAATGATCGCGAATGATCAATCATCAAAATTACAGCCACTAATTACTGAAGTAAATCAACAGACAGAAATTCCACAAACATTCTTTCCAAACAATAACAATGGAAAATAAGAAAAAACACAAGAACCCGAACCCTCTGCTTTCCTTTCCTGCGCAAGGAGGAATGCAGCCTCTCTTCTTCTCCAGAAAATACTCGATACCTCCTTCCTTTTCTTTACTTTCTTTTATTATGATTTGCTAACTAACTACTGTGCCCCACCAGAGTGGTCCCCATCTTCATTACCACCTCCTACACTCCCACGTGTGGCCTTACTGTTATTCTTATTTCTTCTACTATATTTAAACAATATTGGAGGCCTAGCATTTTGCATGCCTAAGTTATATTTCACGTAGTTCTCAATTGGTAAGTGGATAACACCATCTTGTAGTTGGTTATTTAATATTTCGTTAGGTATCCAGAAGTTGAAATTTACTTTTGAGAGATATGAAACCTTATTTTTGTAAACAATTTTTTTTTTTAGCGAGTTCCGCCCACAGTCTTCTCAAAAGGTTTTGAATCTTGATAACATGAGGTTGACATTTAAGCACAACAGATTTAAATATGCAAGTGTCCTGCCTTCATCCAAAGCATATTTACTATTCAAAATTGGATTTGCTTGTGGAATTTCATTCTTGTCCTTTACTTTCTTATTGTTTTCTAGCACAAGGATACTGATGGGATACCAGTTGTTCCCAATCCCAGTAGCTGAAAATCAAATACTACTGATATTACTAAGATGAAAATAACGATAATAACTACAGGACAATATCACCGAATTCGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCAGTTCTCTCTTTCACTTCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACATTGCATTCCCGGTCCAGTTTCACCTTGTCCTCAAGGTGGAAATCGGGGAAGGATTGCTGAAAGTCATCATAGTTTTCCCATGTTGCTTCATGATGCGGTAGACCCTTCCAACTCATTAAGACTTCCCATCCTCCTTTCTCGTTTTTCTGATAACCGAAGACCTCCTGAGGCACAGCTCTCCTTTTCCGCAGTGATACCTGCCTGTATGGCCTAATCTTTAGGAACACCTTATCGCCTTCTTCAAATTCGACATGTCTTCTCTTCATATCGGCACAACTCTTCATCTTTTCTTGGGCTATGCGTAAATGTTCCTTCAAAGCACCCAAGGCTACATCTCTTTCCTTAAGTTGCTCATCTAAAGCCGAGTTGGGAGTTTCACGATCTCCATAATATATCAGGGCTGGGGGTGTTCTTCCATAGACAGCTTGGAATGGTGACACGCCTAATGATCTTTGGAATGTAGTGTTATACCAGTATTCAGCCCAAGACAACCATTTCATCCAATCTTTCGGTTTTTGCCCACGGAAGCACCTTAAATAAATTTCTACAGATCTGTTGACCACCTCTGTCTATCCATCTGTCTAGGGGTGGTATGCTGTGCTTCGGTTCAACTTCGTACCAGCTAAACGAAACAACTCTTTCAAAAAATGACTCAGAAAGATCTTGTCTCGGTCAGGGACAATTGACTGTGGAAAGCCATGCAGTCTTACAACCTCCCGAACAATTCAGCTACCATCTTAGCGTCAAAAGGATGTTTAAGGCCGAGGAAGTGAGCATATTTATTGAAGCAATCCACCACTACGAATATTACTTCAAACCCCATTGATTTAGGCAGTCCTTCAATAAAATCCATGGATATATCCTCCCATACTCTATTTGGTATCTCTAGGGGGGTCAATAATCCTGCAGGTGACAATGCTAAAGTCTTATTCCGCTGACACGTAATACATTCTTCGCAATATTTTTTAACGTGAGCTTTCATTCCCACCCAAAACAACTCTCCTGTCAGCCTCTTATACGTTCTTAAGAACCCGGAATGACCTCCTAGGGCCGAGTCATGATATGTGTGCATAATAATAGGTATCAATGAAGAATTCTTCGCAATCACTAATCTCCCTTTGTATCTCAGTATTCCTTGTTGCAGAGTGTAATTCTTTACCTTCTCCTCCCTCTGAATCCTGTTGATTATATCTTGCAAGTAGTCATTCTTGTTAACCTCCTCTCTGATTACCTTTATGTCCACCAAGGTGGGGGCTGTTAGTTGGTTAAGATGGACAGTTGGTGGCACTCGTGAAAGGGCATCTGCTGCCTTGTTTTCCAAGCCCGGTTTATACACCACCTCAAATGAATAACCCAACAATTTTGCAATCCACTTCTGATATTGCGGTTGTATGACTCTCTGTTCCAGAAAGAACTTAAGTGATCGCTGATCTGTCTCAACTATGAATGTCCTTCCTAACAAATAGGGTCGCCAACGTTGGACTATCAATACTACTGCCATTAATTCCCTCTCGTATACTGGTTTGGTTCGGTCTCGCAAGGCTAGTGTATGGCTATAAAAAGCAATTGGTCTCTTGTTCTGCATTAGCACTGCCCCTACCCCATAGCCTGACGCATCTGTATCTACTTCGAATGGTGCATTAAAATCTGGAAGAGCTAATATAGGCAAGGCCATCATTGCTCGTTGAAGCTTTTCAAACGCTTCTTGTGCTCCCTCATTCCATTTAAATGATCCCAGCTTCAGTAGTTGAGTTAGAGGTGCCGCTATGGACCCATAGTGCTGTACAAAACGGCGGTAGTAACCAGTCAACCCCAGAAACCCTCTAACTTCCCGAACATTTGTTGGAGTTGGCCGTTGCTTGATTGCTCTAATTTTTTCAGGATTGACTTCTACTCCCTTTCCTGACAATGTGTCCCAAATGCTCCACATTTTAGTACGCAAAGCTGCATTTCTTTCTATTAGCAAACAGTTTATGCCTCCTCAATTCTTCCAGAACTAATTCAATGTGCTGACAATGTTCCTCTAAGTTCCTACTATAGACCAGTATATCATCGAGGAAGACCAAGACGAACTTCCTCAAGTACGATCTAAAAACCGAATTCATTAGTGATTGGAAAGTTTCTGGTGCGTTTGTGAGTCCAAACGGCATCACCAAAAACTCATAATGTCCTTCGTGAGTTCTAAAGGCCGTTTTCTCTATATCTTGACTGCACATTCTAATTGATGATATCCCGCTTTCAAGTCAATTTTGGAGAATAGATTTGCACCATTTAGCTCGTCGAACAGTTCTTCCACAACAGGGATAGGAAACTTATCTGGAATAGTTATGTTATTGAGTGCCCTGTAGTCCACGCAGAATCGCCAACTTCCGTCCTTCTTGACCAATAATACGGGGCTTGAGTAGGGGCTTGTGCTGGGACGGATAATTCCTGAGGTTAGCATTTCGTCCACCAATTTTTCCATTTCCTCCTTCTGCTGAAAAGCATACCGATAAGGCCTGACATTCACCGGATCTGCCCCTCCCCTTACGTGTATATGATGTTCGATATCCCTTCTTGGAGGTAATTCTTTGGGCCAATCGAAAACGTCATTATACTGTTTCAAGGCTGTTAGTATGCTCTCAGGTATGTTATTACTCTCTTCTGGCTCTATCTCGGCTATGTGGGCTTCCAAGGTTCTGCACTCAATCAAGTATCCCATGTCTGACTCAGTCCACGATTTAGTTAAATTCTTCAAGCTCACTTGAGTTTTGGTTAGGCTTGGATCCCCTTTTATCACTATTTTTCTGTTGTCATGGAAAAATGACATGGTTAAGTTCTTTCAGTCCATCTCAGTCACTCCCAATGAGTGTAACCATTGCATCCCAAGTATCACGTCTACCCCTCCCAGTTCCAGTGGTAGGAAGTTTTCAAGGACTGTCCACCCATTGAGATCCAACTTTACTTTTTCACACACTCCCTTGCCTTTGATGGCTGTTCCTAACCCAAGTATTACCCCATAGTTAGAAGTATCCTTTGTGGGTAATTTCAGTGTCATCACTAGTCGGTCGGATATGAAATTGTGGGTGGCTCCGCAATCCACTAGCACGACAACCTCCTTACTTTGAATTGTTCCCCTTATCTTCATGGTACTCGGATTCGTCAATCCCACTACCGAGTTAATATATAACTCCACTACTTCCCCAAGGTCATTCTGCAACTCAATAGTTTTCAATTCCTTCAAGTCATACTCGTCTTCCTCAATAATTTCTTCCTCCACGTCGTCCGCTCTTACCACGAACATACATAACTCACGTATTTCCTTCACCCTGCATTTGTGCCTGGAGTAATACTTCTCATCACATTTGAAACAGAGTCCTTTCTCCCTCTTGGCCTGGAATTCTGCGTCGAAAAGCCGTTTGGATGGTCCTTCTTTCTTAATCTCCTTTGCCGGTGATCCCCTCAGTATGATTGTTCGTATCGAAAATACCGTGTTCTCCTTATTCCCCTGTTCTTTTATAATTGAATTTGTTTTGGCCGTATTATAGGGGTAATTTGGAACTTTCGCTCCAGAATAACCGGGTAAATTTGCTTATCTCCTCAGGATCTTCCAATGTTCCACCATTTGCGCGTATCTCATCATCTCCGCTAATCCCACGGGATTGCAGAATTCCATCTCCACCTTAATCCACGGTAACAGCCCTCCCATGAACGTCTCTTCCACAATCTTTTTCGGAATGTCCGATCGGTGCCACCCACTTATCGAATAGATTCCGGTATTCCTCTACACTTGATTCCTGCTGCTGAATACGTAAGAACCGACCATATAGGGAGCCTTCACGGGATGATCGAAACGGATCAATAATCGTTCTTTTAAGTTTAACCAACAGGTAAATTTGTCTCTCTCCTCCTGCGATCGATACCAGTTGAGTGTGGGGCCTTCAAAACTGATTGTAGCGACCGTGAGTTTTCAGAATTCGTCAGTTTGTGTATTTGAAAATACCTATCTGCACGGAATAGCCATGAATCTGGGTCATCTCCATTGAATACCGACATTTCAACTTTGTTGAATTTGTTTCGATCGTTGTTATCCCCATCGCCATCACCCTTCTTCTCCATCGTGTCATTTTTAGTTTCCTTACTTGCCGAACTCTCTCCCTCCGCCGATTTTCCCGTCCATGTTTCTTGTGCCGACGAATCGATTCGTTTACCGCTCGCTAATACTCGTTCCTTGGCCATCGTCTCCATGAATATCATCACCATCTGGTGTGTTTTCTCCACTTGGGCCTGAAGGTTTTCCATGTTTTGTGACATCACCGTAAGCTTCTCTTCCATCACCGGAATTTTGTTGAGTTCTTGTTCGTGTGTGTCCCTTCTCTCTTCACTTCTGGTTTGAACCATGTTTTCCCACTTATTTCGAATCGACGTGCTCTGATACCAAGTTGATGGGATACCAGTTGTTCTCAATCCCAGTAGCCGAAAATCAAATACTACTGATATTACTAAGATGAAAATAATGATAATAACTACAGGACAATATCACCGAATTGGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCTGTTCTCTCTTTCACTCCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACAGATACCTTCCTACTCAAACGTTTTGGAAAATGTTCAGAACTTGTTTCATTGAAGTGTTTCAAATACTCTTCATCGTATTAATTATGTGTTTTTCCTGGGTGTCTATTTAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTGTATCCTCTTGTTTTGGTCTATAAAATGAATTTCTAAATAAGCATTGGAAAGGAGGGCTATAGTTGACATTTTATTGTGCTGAATTTTGGTTATTAAAGGGGTGTAAGTGCAATCAAGTTTTCCTTAATCATCAATAGCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGTGACAAATAGCCTTTTTATGTTTCATGTGTATTGTGTGTCTATAAAGCTTGGTGGCCTTATTAAAACTTTTTCATGTGGTAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGGTATGTATTATCGCAATTGTTTCTGTGTTATTGAGATGAGTTCAGTGCAATAATGAGTTCAAATGTGCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTTGTTATCTGTTAAGAAACTCCTCACTATGCACTATATTTTCTGAGATTTTATTTACATGGAGTTTATAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGTGAATACTTTGATTGCTGACTTGTAACCTTAATGGTGCTTCTAGTCTTGACTATAATATTATGTTGCATGAGGGGCTTCACTTCTACAGCTTACTTGTGAAATAAATCATTTTTTTTATTTGGAATAATTTAATAGATTTAAAGGCCAGTGTTATTGGTATGGATTTAGTTATCCAGTTTTTTTAACTATTGAATTTAGGGGGGAAAAGGTCATTTATTAACAAGTGAGAACAAAGCTACGATGAGCAAAATAAATGGTCCTCTACAAGGCGTTCTATTTTTTACTTAATTAAGAGGAATTAACCGATTTTAAGATGAGATTATGCTCCCTTTGGTGAATGCGATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTTTTACTCCATAGTGGTGGATAATTGTCATACTTGAATGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATGTGAATTTTTTTTCTTTGCCTTTTACATTTCTGTTTTTTTTTTCTAGTTCTCTGTTTATGGATTCTACACCCTTTCGGATATTTATATATGAAGGCCTTAAGTTTTCATGATTCTCTTGCAGCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGGTACTTACCCATATCTCAATCTAGTGTTTTAATCGATCTATTTATACATCCAAAGTTGGATGTTCTTTCTCTCCACACCTGGAGACAGATAATGAATGAGGGTTCCGATGAATGATAAGTGTTCTACTGCGATTGAACTTTCAGATTATTATATCAATCTTTATTTGGTTTATGCAGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTA

mRNA sequence

GGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTGTACTGTTCCTTCTTCTTTCATACTACGATTATATCTTCTTTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTA

Coding sequence (CDS)

ATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAA

Protein sequence

MDSFFVLAIVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL*

Homology

[Close]

BLAST of Cucsa.054690.1 vs. Swiss-Prot
Match: DPB2_ARATH (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 4.1e-198
Identity = 340/472 (72.03%), Postives = 395/472 (83.69%), Query Frame = 1


Query: 13  KSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL-H 72
           KS  +D ++V  +I+ ++ A    EE     TS S+L II+AF +PKF YD +KK F  H
Sbjct: 58  KSSTVDAESVRGLINRLLGAHNAPEEPT---TSASSLAIIDAFLVPKFGYDSVKKKFNEH 117

Query: 73  TENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQ 132
           T +LPIHG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q
Sbjct: 118 TSSLPIHGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQ 177

Query: 133 TGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQ 192
            GRKWVMGVISQ+EDGHFYLEDL+ASVEI+LS AKITTG FTENTII+AEGEM V GIFQ
Sbjct: 178 RGRKWVMGVISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQ 237

Query: 193 VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDS 252
           V+TCGFPPLE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD 
Sbjct: 238 VITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDD 297

Query: 253 EEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHP 312
           EE M KLET+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  HP
Sbjct: 298 EEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHP 357

Query: 313 RLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIV 372
           RL E+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEIV
Sbjct: 358 RLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIV 417

Query: 373 FFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHL 432
           FFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L L
Sbjct: 418 FFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRL 477

Query: 433 YPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           YPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 478 YPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]

BLAST of Cucsa.054690.1 vs. Swiss-Prot
Match: DPOE2_DICDI (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-80
Identity = 163/436 (37.39%), Postives = 260/436 (59.63%), Query Frame = 1


Query: 48  ALCIINAFDIPKFRYDPIKKIFLHTENLP--IHGDASAKAALYRDRFLLLSQRLSRDQHF 107
           AL +I+AF+ P F +D   K F+ +EN    +HG +++K+ LYR R+L + QR  R+ +F
Sbjct: 79  ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLHGSSNSKSDLYRKRYLKVLQRTERNDYF 138

Query: 108 SKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSA 167
           S P             I+P+ SL+G TGRK V+G ISQ+E+  FY+EDL  +V+I++S A
Sbjct: 139 STPVLASDKLKNEYQTITPLSSLLGNTGRKHVLGTISQIEEDQFYIEDLNTNVKIDISKA 198

Query: 168 KITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEE 227
           K   G+ T N+II A GE  ++G+F       PP EER ++LK L   D FG+   P+++
Sbjct: 199 KFEFGIVTINSIIQASGE-FIDGVFIADKIQLPPTEERCETLKFLQNIDMFGE--RPQKK 258

Query: 228 TLRR-ADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSH 287
           T+ +    EK+  ++  + LSD+WLDSE  M +L+ +  G++  +  P   +LMGNF  H
Sbjct: 259 TMEQLIKYEKEKEDNSILFLSDVWLDSERVMERLDYLFGGYK--DCPPFAMILMGNFTEH 318

Query: 288 PCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPS--TVLPRCALPKY 347
           P  +   +   L+  F +L  +I  +P +++ ++F+F+PGP D   S   +LP+  +   
Sbjct: 319 P--LINGTQYQLKKYFNQLAMVIQKYPNIHQFTQFIFVPGPTDPTGSLLNILPKFPISNV 378

Query: 348 LTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLV 407
             ++    +  + F++NPCR+R+ +QEI+ FR DL  +MRR C++ PS  ++ D  +HL+
Sbjct: 379 FIKDFISLIPKSTFTTNPCRIRYCSQEIIIFRDDLTNKMRRHCILEPS--QSCDISQHLI 438

Query: 408 ATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQ-QAFKYTGITCFNPGS 467
             I   SHLC L L  +PI WNYDH + +YP P ++V+GD+S Q +  +  G    NP S
Sbjct: 439 ELICSNSHLCNLTLEDKPIYWNYDHAMSVYPLPDLLVIGDKSNQYEHSRADGTYSMNPSS 498

Query: 468 FTNDSTFVAYRPCNQE 478
           F+ D +F  Y P N++
Sbjct: 499 FSTDYSFAHYIPANKQ 505

[Close]

BLAST of Cucsa.054690.1 vs. Swiss-Prot
Match: DPOE2_CHICK (DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.7e-75
Identity = 165/447 (36.91%), Postives = 255/447 (57.05%), Query Frame = 1


Query: 51  IINAFDIPKFRYDPIKKIF--LHTENLPI---HGDASAKAALYRDRFLLLSQRLSRDQHF 110
           II AFDIP++ Y+P +K F  L   NLP+    G A  KA L+R+R+ +L QR  R + F
Sbjct: 88  IIGAFDIPRYIYNPDRKRFVPLSMTNLPVPNLFGTARDKAELFRERYSILQQRTHRHELF 147

Query: 111 SKPAF----DIGMSHFGSCEISPIQSLVGQTGRKW---VMGVISQMEDGHFYLEDLTASV 170
           +  A     D   S F   ++  +++L+G T +     V+G+I+Q+++G ++LED T  V
Sbjct: 148 TPAAVVIHPDDNRSKF---QLKTVETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTGVV 207

Query: 171 EINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGD 230
           +++LS A+  +GL+TE+  ++AEG    + +F V   GFPP E    +       +FFG 
Sbjct: 208 QLDLSKAQFHSGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFFGG 267

Query: 231 -GVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVL 290
                 + + +   LE +  + MFV LSD+WLD  E + KL T+  G+ +    P+ F  
Sbjct: 268 PSSASVKASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCFFF 327

Query: 291 MGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRC 350
            GNF S P     N   SL+     L  +I  +P +++ S+F+F+PGP+D GP +VLPR 
Sbjct: 328 CGNFSSAP--YGKNQIQSLKGSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGSVLPRP 387

Query: 351 ALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDP 410
            L + +T+E +  V  ++F++NPCRV++ TQEI+ FR+DL+ +M R+C+  PS+  + D 
Sbjct: 388 PLAENITQEFRQLVPFSVFTTNPCRVQYCTQEIIIFREDLVNKMCRNCVRFPSS--SMDI 447

Query: 411 FEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCF 470
             H V TI  Q HL PLPL + P+ W YD+ L +YP P ++V+ D+        T   C 
Sbjct: 448 PNHFVKTILSQGHLTPLPLYVSPVYWAYDYALRVYPVPDMLVIADKYDPFTVTNTDCLCI 507

Query: 471 NPGSFTNDS-TFVAYRPCNQEVELSAL 484
           NPGSF     +F  + P N+ VE S L
Sbjct: 508 NPGSFPRSGFSFKVFYPSNKTVEDSKL 524

[Close]

BLAST of Cucsa.054690.1 vs. Swiss-Prot
Match: DPOE2_BOVIN (DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-72
Identity = 167/486 (34.36%), Postives = 264/486 (54.32%), Query Frame = 1


Query: 9   IVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKI 68
           I AV+   L  + + R + +  A  +  +    TI       II AFDIP+F Y+  +K 
Sbjct: 49  IDAVEKQPLSSNMIERSV-VEAAVQECSQSVDETIDHI--FNIIGAFDIPRFVYNSERKK 108

Query: 69  FLHT--ENLP---IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEI 128
           FL     N P   + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++
Sbjct: 109 FLPLLMTNHPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQL 168

Query: 129 SPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIV 188
             I++L+G T   G   V+G+I+Q+++G F+LED T +++++LS A+  +GL+TE+  ++
Sbjct: 169 KTIETLLGSTSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVL 228

Query: 189 AEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVN 248
           AEG    + +F V   GFPP E    +       +FFG       +T  +   LE +  +
Sbjct: 229 AEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKD 288

Query: 249 DMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRL 308
            MFV +SD+WLD  E + KL  +  G+      P+ F+L GNF S P     N   +L+ 
Sbjct: 289 AMFVFISDVWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKD 348

Query: 309 QFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSS 368
               L  +I  +P +++ S+F+F+PGP+D G  ++LPR    + +T E +  V  ++F++
Sbjct: 349 SLKTLADIICGYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTT 408

Query: 369 NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 428
           NPCR+++ TQEI+ FR+DL+ +M R+C+  PS+    D   H V T+  Q HL PLPL +
Sbjct: 409 NPCRIQYCTQEIIVFREDLVNKMCRNCVRFPSS--NLDIPNHFVKTVLSQGHLTPLPLYV 468

Query: 429 QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQE 484
            P+ W YD+ L +YP P ++V+ D+        T   C NPGSF     +F  + P N+ 
Sbjct: 469 CPVYWAYDYALRVYPVPDLLVIADKYDPFTLTNTECLCINPGSFPRSGFSFKVFYPSNKV 524

[Close]

BLAST of Cucsa.054690.1 vs. Swiss-Prot
Match: DPOE2_MOUSE (DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 2.9e-71
Identity = 165/486 (33.95%), Postives = 262/486 (53.91%), Query Frame = 1


Query: 9   IVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKI 68
           I AV+   L  + + R + +  A  +  +    TI       II AFDIP+F Y+  +K 
Sbjct: 49  IDAVEKQPLSSNMIERSV-VEAAVQECSQSMDETIEHV--FNIIGAFDIPRFIYNSERKK 108

Query: 69  FLHTENL-----PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEI 128
           FL           + G A  KA LY +R+ +L QR  R + F+ P     +   GS  ++
Sbjct: 109 FLPLSMTNHAAPTLFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQL 168

Query: 129 SPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIV 188
             I++L+G T   G   V+G+I+Q+++G F+LED T +V+++LS A+  +GL+TE   ++
Sbjct: 169 KTIETLLGSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVL 228

Query: 189 AEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVN 248
           AEG    + +F     GFPP E    +       +FFG       +T  +   LE +  +
Sbjct: 229 AEG-WFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKD 288

Query: 249 DMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRL 308
            MFVI+SD+WLD  + + K   +  G+      P+ F+L GNF S P     N   +L+ 
Sbjct: 289 AMFVIVSDVWLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKD 348

Query: 309 QFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSS 368
               L  +I  +P +++ S+F+F+PGP+D G  ++LPR  L + +T+E +  V  ++F++
Sbjct: 349 SLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTT 408

Query: 369 NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 428
           NPCR+++ TQEI+ FR+DL+ +M R+C+  PS+  + D   H V TI  Q HL PLPL +
Sbjct: 409 NPCRIQYCTQEIIIFREDLVNKMCRNCVRFPSS--SLDIPTHFVKTILSQGHLAPLPLYV 468

Query: 429 QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQE 484
            P+ W YD+ L +YP P ++V+ D+        T   C NPGSF      F  + P ++ 
Sbjct: 469 CPVHWAYDYTLRVYPVPDLLVIADKYDPFTVTNTDCLCINPGSFPRSGFAFKVFYPSSKT 524

[Close]

BLAST of Cucsa.054690.1 vs. TrEMBL
Match: A0A067DVL2_CITSI (DNA polymerase epsilon subunit 2 OS=Citrus sinensis GN=CISIN_1g009713mg PE=3 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 1.7e-222
Identity = 374/474 (78.90%), Postives = 425/474 (89.66%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KS I+DK++V+RV S+++ A+   E    + ++ SA+ +I+AF +PKFRYD IKK F 
Sbjct: 55  SLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY 114

Query: 71  -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            H  +LPIHG+ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+  S FGSCEIS IQSLV
Sbjct: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTGR+WVMGVISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GI
Sbjct: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQV+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWL
Sbjct: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           D+EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAA
Sbjct: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR++FYTQE
Sbjct: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQE 414

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IVFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH L
Sbjct: 415 IVFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSL 474

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 475 HLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

[Close]

BLAST of Cucsa.054690.1 vs. TrEMBL
Match: A0A059AW13_EUCGR (DNA polymerase epsilon subunit 2 OS=Eucalyptus grandis GN=EUGRSUZ_H00594 PE=3 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 1.8e-221
Identity = 369/476 (77.52%), Postives = 426/476 (89.50%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITST--SALCIINAFDIPKFRYDPIKKI 70
           ++KS I+DKD V+RV+S+++ A+   EESP+       SAL +I+AF +PKFRYDP+KKI
Sbjct: 54  SLKSSIIDKDPVNRVVSLLLEAEAAVEESPDAACEGRGSALRVIDAFLVPKFRYDPVKKI 113

Query: 71  FL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQS 130
           F  HT +LPIHG+ASAKA LY+DRFLLL QRLSRDQHF+KPAF+   + FGSCEISPIQS
Sbjct: 114 FYEHTGSLPIHGEASAKAKLYKDRFLLLYQRLSRDQHFAKPAFETETTEFGSCEISPIQS 173

Query: 131 LVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVE 190
           LVGQTGR+WVMGVISQ+EDGHFYLEDLTASVEINLS AK+TTG FTENTI+V EG+ML+E
Sbjct: 174 LVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSDAKVTTGFFTENTIVVVEGQMLLE 233

Query: 191 GIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDI 250
           GIF++ TCGFPPLEER KSLK LAG DFFG G L KEETLR A+LEK+AVNDMF+ILSD+
Sbjct: 234 GIFKIFTCGFPPLEERDKSLKALAGLDFFGGGALTKEETLRLAELEKRAVNDMFIILSDV 293

Query: 251 WLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMI 310
           WLD+EEAMGKLE +LDGFEN EVVPSLFVLMGNFCS PCN++F+S+SS+R QFGKLG+MI
Sbjct: 294 WLDNEEAMGKLEMVLDGFENEEVVPSLFVLMGNFCSRPCNLSFHSYSSIRAQFGKLGQMI 353

Query: 311 AAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYT 370
            +HPRL EHS+FLFIPGP+DAGPSTVLPRCALP+Y+TEE Q  + NAIFSSNPCR++FYT
Sbjct: 354 ESHPRLKEHSRFLFIPGPEDAGPSTVLPRCALPRYITEEFQNRIPNAIFSSNPCRIKFYT 413

Query: 371 QEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDH 430
           QEIVFFRQDLLY+MRRSCL+PPSTEETSDPFEHLVATITHQSHLCPLPLV+QP+IWNYDH
Sbjct: 414 QEIVFFRQDLLYKMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPLVVQPVIWNYDH 473

Query: 431 CLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
            LHLYPTPH IVLGD+S+Q+AF YTGITCFNPGSF+ND TFVAYRPC +EVELSAL
Sbjct: 474 SLHLYPTPHTIVLGDKSEQKAFSYTGITCFNPGSFSNDGTFVAYRPCTREVELSAL 529

[Close]

BLAST of Cucsa.054690.1 vs. TrEMBL
Match: V4T327_9ROSI (DNA polymerase epsilon subunit 2 OS=Citrus clementina GN=CICLE_v10019690mg PE=3 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 4.1e-221
Identity = 372/474 (78.48%), Postives = 424/474 (89.45%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KS I+DK++V+RV S+++ A+   E    + ++ SA+ +I+AF +PKFRYD IKK F 
Sbjct: 55  SLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY 114

Query: 71  -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            H  +LPIHG+ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+  S FGSCEIS IQSLV
Sbjct: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTGR+WVMGVISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GI
Sbjct: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQV+TCGFPPLE+R +SLKLLA  DFFG G L KE+TLR ADLEK+A NDMFVILSDIWL
Sbjct: 235 FQVITCGFPPLEDRDQSLKLLAEYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           D+EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAA
Sbjct: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEEL+ ++ NAIFSSNPCR++FYTQE
Sbjct: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELKKYIPNAIFSSNPCRIKFYTQE 414

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IVFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH L
Sbjct: 415 IVFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSL 474

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 475 HLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

[Close]

BLAST of Cucsa.054690.1 vs. TrEMBL
Match: A0A067K917_JATCU (DNA polymerase epsilon subunit 2 OS=Jatropha curcas GN=JCGZ_13167 PE=3 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 5.3e-221
Identity = 374/476 (78.57%), Postives = 425/476 (89.29%), Query Frame = 1


Query: 10  VAVKSPILDKDAVHRVISIMVAADKVGEESPN-TITSTSALCIINAFDIPKFRYDPIKKI 69
           V VKS I+DK+ +HR++S ++ AD   E+ P+  ++S SA+ +I+AF IPKF +DPIKK 
Sbjct: 58  VGVKSSIIDKEPIHRLVSGLLEADDAVEQGPSDNVSSHSAIRVIDAFLIPKFHFDPIKKQ 117

Query: 70  FL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQS 129
           F  HT  L IHG++SAKAALY+DR+LLL QR+SRDQHFSKPAFD GMS +GSCEI+PIQS
Sbjct: 118 FYQHTGGLSIHGESSAKAALYKDRYLLLFQRISRDQHFSKPAFDTGMSQYGSCEIAPIQS 177

Query: 130 LVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVE 189
           LVGQTG++WVMGVISQ+EDGHFYLEDLTASVEINL+ AKITTG  +ENTI+VAEGEML++
Sbjct: 178 LVGQTGKRWVMGVISQLEDGHFYLEDLTASVEINLTKAKITTGFLSENTIVVAEGEMLLD 237

Query: 190 GIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDI 249
           GIFQV TCGFPPLEER KS+KLL   DFFG G L KEETLR A+LEK AVNDMFVILSDI
Sbjct: 238 GIFQVYTCGFPPLEERDKSMKLLEQHDFFGGGSLTKEETLRLAELEKGAVNDMFVILSDI 297

Query: 250 WLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMI 309
           WLD+EEAMGKLET+LDGFE  EVVPSLFV MGNFCSHPCN++F+SFSSLRLQF  LGK+I
Sbjct: 298 WLDNEEAMGKLETVLDGFEVQEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFENLGKLI 357

Query: 310 AAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYT 369
           AAHPRL EHS+FLFIPGPDDAGPSTVLPRC+LPKYLTE LQ H+ NAIFSSNPCRV+FYT
Sbjct: 358 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCSLPKYLTEGLQKHIPNAIFSSNPCRVKFYT 417

Query: 370 QEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDH 429
           QEIVFFR DLLYRMRRSCL+PPSTEET+DPFEHLVATITHQSHLCPLPLV+QPIIWNYDH
Sbjct: 418 QEIVFFRYDLLYRMRRSCLMPPSTEETADPFEHLVATITHQSHLCPLPLVVQPIIWNYDH 477

Query: 430 CLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
            LHLYP+PH IVLGD+S+Q+AFKYTGITCFNPGSF+ND+TFVAYRPC QEVE SAL
Sbjct: 478 SLHLYPSPHTIVLGDKSEQKAFKYTGITCFNPGSFSNDNTFVAYRPCTQEVEFSAL 533

[Close]

BLAST of Cucsa.054690.1 vs. TrEMBL
Match: A0A061FWB8_THECC (DNA polymerase epsilon subunit B2 isoform 1 OS=Theobroma cacao GN=TCM_013360 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 8.5e-219
Identity = 370/471 (78.56%), Postives = 418/471 (88.75%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTS--ALCIINAFDIPKFRYDPIKK- 70
           ++KS I+DK AVHRVIS+++ A+   EE P + TS S  ++ +++AF +PKFRYDPIKK 
Sbjct: 54  SLKSSIIDKGAVHRVISLLLEAEAAEEECPTSSTSLSHSSIRVVDAFLVPKFRYDPIKKH 113

Query: 71  IFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQS 130
            F H  +LPIHGDASAK ALYRDRFLLL QR+SRDQHF KPAFD   +   SC++SPIQS
Sbjct: 114 FFQHAGSLPIHGDASAKPALYRDRFLLLFQRVSRDQHFIKPAFDTDETS-QSCQLSPIQS 173

Query: 131 LVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVE 190
           LVGQ G++WVMGVISQ+EDGHFYLEDLTA+VEI+ S AKITTG F ENT+IVAEGEML E
Sbjct: 174 LVGQRGKRWVMGVISQLEDGHFYLEDLTAAVEIDFSKAKITTGFFMENTVIVAEGEMLSE 233

Query: 191 GIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDI 250
           GIFQV+TCGFPPLE+R KS K+LAG DFFG G L KEETLR ADLEK+AVNDMFVILSDI
Sbjct: 234 GIFQVITCGFPPLEDRDKSFKILAGHDFFGGGTLTKEETLRLADLEKRAVNDMFVILSDI 293

Query: 251 WLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMI 310
           WLD+EE M KLET+L+GFE+VE+VPSLFVLMGNFCSHPCN++F+SFSSLRLQFGKLG+MI
Sbjct: 294 WLDNEEVMEKLETVLNGFESVEIVPSLFVLMGNFCSHPCNLSFHSFSSLRLQFGKLGRMI 353

Query: 311 AAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYT 370
            AHPRL E S+FLFIPGPDDAGPST LPRCALPKYLTEELQ HV NAIFS+NPCR++FYT
Sbjct: 354 EAHPRLKEQSRFLFIPGPDDAGPSTALPRCALPKYLTEELQKHVPNAIFSTNPCRIKFYT 413

Query: 371 QEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDH 430
           QEIVFFRQDLLYRMRRSCLIPPSTEET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH
Sbjct: 414 QEIVFFRQDLLYRMRRSCLIPPSTEETDDPFEHLVATITHQSHLCPLPLFVQPIIWNYDH 473

Query: 431 CLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 479
           CLHLYPTPH I+LGDRS+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEV
Sbjct: 474 CLHLYPTPHTIILGDRSEQKAFKYTGITCFNPGSFSDDSTFVAYRPCTQEV 523

[Close]

BLAST of Cucsa.054690.1 vs. TAIR10
Match: AT5G22110.1 (AT5G22110.1 DNA polymerase epsilon subunit B2)

HSP 1 Score: 692.2 bits (1785), Expect = 2.3e-199
Identity = 340/472 (72.03%), Postives = 395/472 (83.69%), Query Frame = 1


Query: 13  KSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL-H 72
           KS  +D ++V  +I+ ++ A    EE     TS S+L II+AF +PKF YD +KK F  H
Sbjct: 58  KSSTVDAESVRGLINRLLGAHNAPEEPT---TSASSLAIIDAFLVPKFGYDSVKKKFNEH 117

Query: 73  TENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQ 132
           T +LPIHG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q
Sbjct: 118 TSSLPIHGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQ 177

Query: 133 TGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQ 192
            GRKWVMGVISQ+EDGHFYLEDL+ASVEI+LS AKITTG FTENTII+AEGEM V GIFQ
Sbjct: 178 RGRKWVMGVISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQ 237

Query: 193 VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDS 252
           V+TCGFPPLE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD 
Sbjct: 238 VITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDD 297

Query: 253 EEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHP 312
           EE M KLET+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  HP
Sbjct: 298 EEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHP 357

Query: 313 RLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIV 372
           RL E+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEIV
Sbjct: 358 RLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIV 417

Query: 373 FFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHL 432
           FFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L L
Sbjct: 418 FFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRL 477

Query: 433 YPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           YPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 478 YPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]

BLAST of Cucsa.054690.1 vs. NCBI nr
Match: gi|778660923|ref|XP_011657177.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus])

HSP 1 Score: 956.4 bits (2471), Expect = 1.8e-275
Identity = 471/473 (99.58%), Postives = 473/473 (100.00%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL
Sbjct: 56  SLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 115

Query: 71  HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVG 130
           HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVG
Sbjct: 116 HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVG 175

Query: 131 QTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF 190
           QTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF
Sbjct: 176 QTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF 235

Query: 191 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 250
           QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD
Sbjct: 236 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 295

Query: 251 SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 310
           SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH
Sbjct: 296 SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 355

Query: 311 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 370
           PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI
Sbjct: 356 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 415

Query: 371 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 430
           VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 475

Query: 431 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 476 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

[Close]

BLAST of Cucsa.054690.1 vs. NCBI nr
Match: gi|659066275|ref|XP_008463560.1| (PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo])

HSP 1 Score: 900.6 bits (2326), Expect = 1.2e-258
Identity = 445/474 (93.88%), Postives = 458/474 (96.62%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF- 70
           ++KSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF 
Sbjct: 56  SLKSPILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFH 115

Query: 71  LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV
Sbjct: 116 RHTGDLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 175

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLS+AKITTGLFTENTIIVAEGEMLVEGI
Sbjct: 176 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLFTENTIIVAEGEMLVEGI 235

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQVVTCGFPPLEER KSLKLLAGQDFFG GVLPKEETLR ADLEKKAVNDMFVILSDIWL
Sbjct: 236 FQVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVNDMFVILSDIWL 295

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA
Sbjct: 296 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 355

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRLN+HSKF FIPGPDDAGPSTVLPRCALPKYLTEELQ+HV NA FSSNPCRVRFYTQE
Sbjct: 356 HPRLNKHSKFXFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSSNPCRVRFYTQE 415

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL
Sbjct: 416 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 475

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 476 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529

[Close]

BLAST of Cucsa.054690.1 vs. NCBI nr
Match: gi|1009133442|ref|XP_015883902.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Ziziphus jujuba])

HSP 1 Score: 786.9 bits (2031), Expect = 1.9e-224
Identity = 384/478 (80.33%), Postives = 430/478 (89.96%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMV----AADKVGEESPNTITSTSALCIINAFDIPKFRYDPIK 70
           ++KS I+DK+AV+ VIS+++    A D    ++P T T+TSA+ +I+AF +PKFRYD IK
Sbjct: 55  SLKSTIIDKEAVNGVISLLLEAEAAVDDETSDNPAT-TATSAIRVIDAFLVPKFRYDSIK 114

Query: 71  KIFL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPI 130
           K+F  HT +LPIHGDASAKAALYRDRF LL QRLSRDQHFSKPAF   +SHFGSCEISPI
Sbjct: 115 KLFYEHTGSLPIHGDASAKAALYRDRFFLLFQRLSRDQHFSKPAFSSELSHFGSCEISPI 174

Query: 131 QSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEML 190
           QSLVGQTGR+WVMGVISQ+EDGHFYLEDLTASVEINL++ KITTG  +ENTI+VAEGEML
Sbjct: 175 QSLVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLANTKITTGFLSENTIVVAEGEML 234

Query: 191 VEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILS 250
           VEGIFQV+TCGFPPLE+R KSLK+LAG DFFG G+L KEETLR ADLEKKAVNDMFVI+S
Sbjct: 235 VEGIFQVITCGFPPLEDREKSLKVLAGHDFFGGGILTKEETLRLADLEKKAVNDMFVIIS 294

Query: 251 DIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGK 310
           D+WLD+EEAMGKL T+LD FEN EVVPSLFV MGNFCSHPCN++F+SFSSLR QFGKLG+
Sbjct: 295 DVWLDNEEAMGKLGTVLDVFENEEVVPSLFVFMGNFCSHPCNLSFHSFSSLRSQFGKLGQ 354

Query: 311 MIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRF 370
           MI  HPRL EHS+FLFIPGPDDAGPSTVLPRC LPKYLTEELQ H+ NAIFSSNPCRV+F
Sbjct: 355 MIGNHPRLKEHSRFLFIPGPDDAGPSTVLPRCTLPKYLTEELQNHIPNAIFSSNPCRVKF 414

Query: 371 YTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNY 430
           YTQEIVFFRQDLLYRMRRSCL+PPSTEET D FEHLVATITHQSHLCPLPL +QPIIWNY
Sbjct: 415 YTQEIVFFRQDLLYRMRRSCLVPPSTEETDDHFEHLVATITHQSHLCPLPLSVQPIIWNY 474

Query: 431 DHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           DH L+LYPTPH IVLGDRSKQ+AFKYTGITCFNPGSF+++STFVAYRPCNQEVELSAL
Sbjct: 475 DHSLYLYPTPHTIVLGDRSKQKAFKYTGITCFNPGSFSSESTFVAYRPCNQEVELSAL 531

[Close]

BLAST of Cucsa.054690.1 vs. NCBI nr
Match: gi|225455720|ref|XP_002267181.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Vitis vinifera])

HSP 1 Score: 781.9 bits (2018), Expect = 6.2e-223
Identity = 374/474 (78.90%), Postives = 427/474 (90.08%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KS ILDK++VHRV+S+++ A+   EE+P  I++ SAL I++AF + KF YDPIKKIF 
Sbjct: 54  SLKSSILDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFY 113

Query: 71  -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            +T  L IHGDASAK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+
Sbjct: 114 ENTGRLAIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLI 173

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTG++WVMGVISQ+EDGHF+LEDLTASVEINLS+AKITTG F+ENTIIVAEGEM ++GI
Sbjct: 174 GQTGKRWVMGVISQLEDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGI 233

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQV TCGFPPLE+R +SL  L+G DFFG G L +EETLR A LEKKAVNDMFVILSD+WL
Sbjct: 234 FQVSTCGFPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWL 293

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           D+EE MGKL T+LDG+ENVEVVPSLF+ MGNFCSHPCN++F+SFSSLRLQFGKLG+MIA+
Sbjct: 294 DNEETMGKLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAS 353

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALP YLTEE + ++ NAIFSSNPCR++FYTQE
Sbjct: 354 HPRLKEHSQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQE 413

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IV FRQDLLYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPL +QPIIWNYDHCL
Sbjct: 414 IVLFRQDLLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCL 473

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYP PH IVLGDRS+Q+AFKYTGI CFNPGSF+N+STFVAYRPC QEVELSAL
Sbjct: 474 HLYPNPHTIVLGDRSEQKAFKYTGIMCFNPGSFSNESTFVAYRPCTQEVELSAL 527

[Close]

BLAST of Cucsa.054690.1 vs. NCBI nr
Match: gi|1012175509|ref|XP_015966828.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Arachis duranensis])

HSP 1 Score: 781.2 bits (2016), Expect = 1.1e-222
Identity = 379/479 (79.12%), Postives = 432/479 (90.19%), Query Frame = 1


Query: 7   LAIVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITST-SALCIINAFDIPKFRYDPI 66
           L + + KS I++K+ VHRV+S ++ AD   EES +  ++  SA+ +++AF +PKFRYDPI
Sbjct: 53  LELESQKSTIIEKEPVHRVVSRLLEADAAVEESSDPCSAGGSAIRVVDAFLVPKFRYDPI 112

Query: 67  KKIFL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISP 126
           +K F  HT +LPIHGDASAKAALYRDRFLLL QRLSRDQ+FSKPAF+   SHFGSCEISP
Sbjct: 113 RKQFYEHTGSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFESEFSHFGSCEISP 172

Query: 127 IQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEM 186
           IQSLVGQTGRKWVMGVISQ+EDGHFYLEDLTASVEINLS+AKITTG F+ENTI+VAEGEM
Sbjct: 173 IQSLVGQTGRKWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFSENTIVVAEGEM 232

Query: 187 LVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVIL 246
           L  GIFQV+TCGFPPLE+R KSL+ +AG DFFG G L KEET+R AD+EKKAVNDMFVIL
Sbjct: 233 LASGIFQVLTCGFPPLEDRDKSLRQIAGHDFFGSGTLTKEETIRLADMEKKAVNDMFVIL 292

Query: 247 SDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLG 306
           SDIWLD+EEAMGKLET+LDGFE+VEVVPSLFV MGNF SHPCN+AF+++S+LR QFGKLG
Sbjct: 293 SDIWLDNEEAMGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLAFHAYSTLRSQFGKLG 352

Query: 307 KMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVR 366
           ++IAAHPRL EHSKFLFIPGPDDAGPSTVLPR ALPKYLTEELQ H+ NAIFSSNPCRV+
Sbjct: 353 QLIAAHPRLTEHSKFLFIPGPDDAGPSTVLPRRALPKYLTEELQNHIPNAIFSSNPCRVK 412

Query: 367 FYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWN 426
           FYTQEIVFFRQD+LYRMRRSCL+PPS EET DPF+HLVAT+THQSHLCPLPL +QPIIWN
Sbjct: 413 FYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATMTHQSHLCPLPLTVQPIIWN 472

Query: 427 YDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           YDHCL+LYPTPH+IVLGDRS+Q+AFKYTGITCFN GSF+ DSTFVAYRPC+QEVELSAL
Sbjct: 473 YDHCLYLYPTPHMIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL 531

The following BLAST results are available for this feature:

BLAST of Cucsa.054690.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPB2_ARATH	4.1e-198	72.03	DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1	[more]
DPOE2_DICDI	1.2e-80	37.39	DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1	[more]
DPOE2_CHICK	9.7e-75	36.91	DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1	[more]
DPOE2_BOVIN	2.6e-72	34.36	DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1	[more]
DPOE2_MOUSE	2.9e-71	33.95	DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2	[more]

BLAST of Cucsa.054690.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067DVL2_CITSI	1.7e-222	78.90	DNA polymerase epsilon subunit 2 OS=Citrus sinensis GN=CISIN_1g009713mg PE=3 SV=...	[more]
A0A059AW13_EUCGR	1.8e-221	77.52	DNA polymerase epsilon subunit 2 OS=Eucalyptus grandis GN=EUGRSUZ_H00594 PE=3 SV...	[more]
V4T327_9ROSI	4.1e-221	78.48	DNA polymerase epsilon subunit 2 OS=Citrus clementina GN=CICLE_v10019690mg PE=3 ...	[more]
A0A067K917_JATCU	5.3e-221	78.57	DNA polymerase epsilon subunit 2 OS=Jatropha curcas GN=JCGZ_13167 PE=3 SV=1	[more]
A0A061FWB8_THECC	8.5e-219	78.56	DNA polymerase epsilon subunit B2 isoform 1 OS=Theobroma cacao GN=TCM_013360 PE=...	[more]

BLAST of Cucsa.054690.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22110.1	2.3e-199	72.03	DNA polymerase epsilon subunit B2	[more]

BLAST of Cucsa.054690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778660923\|ref\|XP_011657177.1\|	1.8e-275	99.58	PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus]	[more]
gi\|659066275\|ref\|XP_008463560.1\|	1.2e-258	93.88	PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]	[more]
gi\|1009133442\|ref\|XP_015883902.1\|	1.9e-224	80.33	PREDICTED: DNA polymerase epsilon subunit 2 [Ziziphus jujuba]	[more]
gi\|225455720\|ref\|XP_002267181.1\|	6.2e-223	78.90	PREDICTED: DNA polymerase epsilon subunit 2 [Vitis vinifera]	[more]
gi\|1012175509\|ref\|XP_015966828.1\|	1.1e-222	79.12	PREDICTED: DNA polymerase epsilon subunit 2 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007185	DNA_pol_alpha/epsilon_bsu
IPR016266	POLE2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication
GO:0006261	DNA-dependent DNA replication

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006260	DNA replication
biological_process	GO:0071897	DNA biosynthetic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008622	epsilon DNA polymerase complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.054690	Cucsa.054690	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.054690.1	Cucsa.054690.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.054690.1.CDS.12	Cucsa.054690.1.CDS.12	CDS
Cucsa.054690.1.CDS.11	Cucsa.054690.1.CDS.11	CDS
Cucsa.054690.1.CDS.10	Cucsa.054690.1.CDS.10	CDS
Cucsa.054690.1.CDS.9	Cucsa.054690.1.CDS.9	CDS
Cucsa.054690.1.CDS.8	Cucsa.054690.1.CDS.8	CDS
Cucsa.054690.1.CDS.7	Cucsa.054690.1.CDS.7	CDS
Cucsa.054690.1.CDS.6	Cucsa.054690.1.CDS.6	CDS
Cucsa.054690.1.CDS.5	Cucsa.054690.1.CDS.5	CDS
Cucsa.054690.1.CDS.4	Cucsa.054690.1.CDS.4	CDS
Cucsa.054690.1.CDS.3	Cucsa.054690.1.CDS.3	CDS
Cucsa.054690.1.CDS.2	Cucsa.054690.1.CDS.2	CDS
Cucsa.054690.1.CDS.1	Cucsa.054690.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.054690.1.three_prime_UTR.1	Cucsa.054690.1.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.054690.1.five_prime_UTR.2	Cucsa.054690.1.five_prime_UTR.2	five_prime_UTR
Cucsa.054690.1.five_prime_UTR.1	Cucsa.054690.1.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007185	DNA polymerase alpha/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 241..449 score: 3.4
IPR016266	DNA polymerase epsilon, subunit B	PIR	PIRSF000799	DNA_pol_epsilon_2	coord: 10..483 score: 1.5E
None	No IPR available	PANTHER	PTHR12708	DNA POLYMERASE EPSILON SUBUNIT B	coord: 12..483 score: 3.4E