Cucsa.022110.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGGCTGTTAGAGAGGGAGAGTCTTGGAATCAATGAAGAGGCAGAACAGTCAGTTATCGTCCACTTCCCGCCGAGATCCTCCACCGGAGAGTCTTCGAGCTAAAAGCATCGGTTGCATGTCCGGCATTATTCATCTTCTCTCCAAGTACCAGAACCGCCACAAGAAATCCCTCACATTCGGTTCGTCAATTACTAATTACTCTCTAATTTCTTTCATTTTGATCCAACAATTCGTATGTTGACTACAATGAATTTCTCGATGTTTTCAGGAAAGAGTAAACAAGAGAAGGATATTATCGTGTTTTCTTCTACTTCACAAAATTCCGATCATACCTCAGTTTCTGCCGCCAGTATTTCCCCGGCTACTCCACCGCCACAGAGACAACGAAGGTCACGAAGTGACAAAAACAGAGAAGGAAAAGGAACGGAGGTTTTTGATTTCAGTCGGAAAAGAATCTCCTTCGATTTGCCGACGAGGAGTCCGACGCTTTCGGTGGAGATAAGGCGATCGAGTTCAGTGAACTCGCCGACGAAGATCGGAAAATCTCCCGCACTTGTAGCACGATTGATGGGACTAGAAGCTGTGCCGGCGGCGGAAGAAACGTCAAGAGAGAAGAGGAGGAAGCTTTTGGGAGCGTTGGAGAAATGTGATAATGATTTGAAGGCTCTGAAGAAGATAATCATGGCGTTTCGGTCACCGGAGATTGATCATCTACCGTCGATGGAAATTGCGGGGAACGGGGTGAATGGAGATAAAGTAGGAAGGATTTCAGTGCGGAAGTGTAGAGACTTTAGCTGTAGCGATGAGGAGAAGAAGCCTTGCAGTCGATTGCATCATCTGAACAGAATCAACCGTGCAGCCAAACAGCGTGAAAATGGTACGTTCCTTTCAGTTCTTTAACTTTAACTTTAATTTTCTTTTTCTAAACCCTAAAACTCAATTGAAATTTTAAGTGTCTACAGCTCTCCATTCTGTTCCCAATAATTATATTTTAAAATTTTCAGCTGATAAAAATTTGATTAAACTGTCAATTTGGTCCTTTTATGATCTAATAAACGTTATCTTTCTAAATACTTTATAAGGACAAATCATAGGGATTAGGATTTATTATATTTAGCTTAAATTTTTTGTTGAAATTTCTAATATCAAAACACAAATATGTTTAATCAAACATTAAATTCCATAATAAAACTATTAATTAACTTTTTGTACAATGATCTTTTAATAGTATTACTCGATTGAAAATTCTTAACATTATTAAATATAAATTGAGAACTACACATTATTTAATTGTACTTAATTTATAAATATATATAAAAAAACTTGGATTAAGTTCTCTCAAGTCTCTCAACCAGGGATGATTAATAGCCATTTAAACTATTCATCTTTTTACAATGTTCGTGAGTACAAAAGATTCACTTTAAAACTTAAAAAACACAATAATATACCACCATTACTATGCATTTGAAATTTTGAATGGTTAACATCAAGCTTTGGATTTTAATCCCTTGGGATATATATTTTCTCAATAATAATAACAATAATACCAGCTCGTAATTGAACATTGAACTTGAGTTTTTTAAAATGAAAAATATGTACTAGATCCATTTCCAACATTTCAACTTTGTGTTTTCTACTAAATTATTCAGTTAAAAAAATTCATGTGATAATTTTTTTTTCTTTTATGAAATATTTTATGCTTCATTTGTTAACTATATATTTTTTTGTTTTAAAAATTTAAACCTATCTCTTTTTTATGACTTAACATGATACATTTTTCTGAAGTACAAATGGTTGAATTCTTAGACAAATTTCGAAAATCAAAACAATTTTTCAAAAACAACTTTTTTATTTTTCAAGATTTGACTTGGTTTTTTAAACTACGGATAGAATGTTGCTAACAATAAAAAGAAGTTGAAGGTGAAAGTAGTGTTTATGAGTTAATTTTCAAAAATAAAATGGTTATCAAATAAGATCTTAATTATTCGTTTAATTATTAAAAAATATGATCCAGGATCCTGGGTGCATTCAACCCACCCAAAGTACTATGCTTTAAGAGCATATCATTTGTTGTCTCTATAACCTATAAAACTGTGTTACACCACCTCCACAAAATTACAGGAAAAGTAGCTAAAGTGAAAAAGAAAAGAAAAGAAAAACTATATAGGAATCTCATGCAGGCAAAGAAAAAGATCAAACAAGGACAGCTTTATTTCACCTCATAATTCACACGAATGCAGTTGTTTTCTCAACTTTTCTTTCCCCTTGAGTTATTCTTGGAGTAATTTTTAAGAATCCAAATGCTTAATTACTGATTGGATGAAACACTACATCTGGAGGGGGTTAGAAAATTTTAGAAGAAAAGGAAAAGAAACTACGTTTTAATTAATCTAAGCCAATAATAATTAAAAACAAAATTACGAATTAAGCCAATTATTTTAAGTCACCGCCAAAGTCTCAATTGGTTTTTCATCCCTAGTGGTTTTAGAACCTTATAAACGTTCCATAATAATATTCCAAAAGAACAAAATTTAGGATTTCTTTTTTCAAAACTTATAATTTAGTCTTTATTTAATATCTGTACAGATTGTATAAAATATGCTTGAGCTTGAGGGTGGTGTCCATATTATTAGTCTAATAGGTACAAGAAAAAGACAAGAGAAATGGTTCTTGAAGGAAAAGTAGAAGGGGCATAGCATGCCAAAATGTAGGATTCCCAACATCAACCTTCATAGCATTTGTTAGGTTCAGTGCTTTTACTGCTGTGTTGGCATGAGGGGACATAGTAGAATACTTTTTAGTTCCATATGCAATTATTACATGTATGGCCAAATAACCATAGTGCCATCTACCATTGACTGACTTTATCAAAATTGAGACCTAAGTTTCTTAGGTCTCATTGGTCCAACTTCAATTGAGGAGAGTGAGACATTATCATTTGCTCACTCTTAAGGTCTTTAACAACTATTATATTATAAACTCCAGTTAATTATATTATTACTATTTCAATTTTCTCTTTTAACAGTATTTATCTATATTCTATTTCTATCTCTTACCTTCATTAACTCACAACTACTTTCCACTTTAAATACAAATTATTATAAGTCATATTTTCTCTTGCTTAAAAGGATTATCCAAAATTCTAAAGGATAGTATTGAGTTAGTTTGAGGCAACAAACTGATGTTGCTGAGTGATTAACTATGTAATGCTTCTTAAAAGTGTAAAATATATTTAAATAATATAATAATAAAAAAGAAACTCAACATTAATTAAATTTATGTATATACTCACGTTGTGTAGATGTATTTATATGAATATATGATGGATTAGATTTTAGAATGATTATTGTTTGGAACTATTTTTAAGTACTGAAAAATATTTACTTTAAAGAAATATATTCTAAACACTAAGAAAAAAAATCATTTCAAACATGCAGATAACTTTTTTGAGCTTAGTATAGAGACTGAGGATCACTTCTCCTCTATTCTCAATTCACATAGAATGCTTTTCGAATTTCGAGGTCCAACATGAAATTATTTAGGATAGTCGTTGAATTCTTTACGAAATGTCACTTTTATTCCTCTTCCACCACTATATATTTTGTTAATATTTTATCCCCAATTTCTTCTTCCTTTTCTTCTCATTTCCACTTTAGTATCGTTTATACCAAAGGATCCTTAGTATAAATGTGATAATGGATGAAGTGGACCACTGTTCCGCACAAGCCTAGAACAAACAAATAGCTAGCAACGACTTGTAATGATTCAGCCAGTCATATATTGTTTTAAAAAGGTCTAGGGGGAACATACAGCCACAGGCTCTTTCACTTTTTCAGAAATAAGAAAGCAGTAGATATATATATGGCTTTAATTCTTTTTCTTGCTCAGTAAACACAACCACAGGCTTTTTCTAAAGCCATTGTTTACAAGCTTCTCTTCCTACTCCCACTGGCCAATATCTGTCAGCCAATTATCCTATCCCCACCACCCATATCTCTAATCTATATTACCATGAGAATTTGAACTGCTTTTTGTTTTTTGTTTTATTTTTGTTCTTTTTCTTTTTTCTTTCTGCATTGAAGTTTCTTAGTCCCTCTTCAACCCTTTATCTTTTGGTGTGCTTATAGCTTACATATTATTAGTTGTCACTTTTTTTTAGTTCCTCTATCATGTTATTTTAGCATGTTTTATTATGATGCACATACTTTTCAGTAAACTTTTGAGGCCTTTCCCTAATATAAAATTCTCTTAAGCCAAGTCTTTCTTAATCTTAACCATTTGTATTTTCATTATCCTTAGGATATCTCTCATTTTCGAATGTGATTTTAGTTGAAAAACTAAAATTGAAAGTAAGCATGTAGGGAATAAAATGAATTGATTTGAAAGTACATGGAGAAAATGAAAAAAAAAAAAGGACTGAGGACTTATTTAGGTATTTAAACCTCAATTCATTGATCAGATTTTCAACTTATTTGAGACCAAAAAGTTAAAGTAGATCTAGCTATATTTCCAACGGTCTTGTTTTATTTTGATTCCTCAAAATTCTCAAATTCTCACATTAATTAAACTATGGTCCTTGCTTTTGGACTAAGATTATTCTTTTCTTCTTCTCACTTACTATGATTTTTCTCAACAAAACACATGTACTCTTGATTGGTTTCGTGGCCTCTCTCATTTATAGATAATATATATAACGGCGATTGCAAAAATAACAAAAATATTTATGATAATAGAATCTATGTTATTATATTTACTAAATTGCAAATATAGTCAACATGCCCACTTATGGTGAGTGTACCCACAAACTTCAGTCACTTTTGATATAAAAAAAATTTGGACTATAACTTTCATTATCCATGGATGAAGCCACAAAAAGGAAAATAAGACTAGAATCTGGAATAGAGAAGAGAGTATATGGAGAAATTTGTTCGATAGAATGCTTTGGCACTTTGCTCAATTAGAATTTTTCTAACCTACAAGGGGTGGAGAACACACCTCTGTTTAAGTAGTTTTTTGGGACCTAGAATGATGCATGGGTGATTCGAGTTGATGATTTGGGATAATATTCTATATAAATGCGACACATTTTTAATTGTAGCTAGAGATGTCAAAGTTTTTAAGGTGAAAGCTCTTTCCGTTCAACTTGCTGAGGCACTGAAAATTAATTTACAACCTAATTTTGGTTGAATCTGATTGTTTTGAGGCGATTAAACTCATAAATGGAAATGTGAGTAAATATTTCTGAATTATTATTATTATTATTATTATTTTGTTATCGTGTGGAGATTAGTGTGATATGGTGCAGATTTTGGAGATATTTCCTTTTCCCATATCCATCAATCTCACAAAGCTTTGGAGCACGCTCTTGGAAAATTCATTTTTTGGACGATAGAAGTTCCCTTTCATTTTTGTCTCTCCTAATATACTTCTTTGGTTTTCTTTTTTTATGATGTCCTTTCTATAAAAAGTTTCGATGTCATGTAAAGTAAAAAAAAAAAACCCGATAAGTGTAAAAAACTAATGCAAGGTGGGTTTGGAATGATGACTTGTTCTTTGGCAGGTGGAGAAGAAACAAAGCAAGAGCCAAAGAAGAAGAATCCAGCAGCAATAATTGAAGAGGACAGAATAATCTCCATATCTTCCATAAACCCAATTACCAGATTACAGGAGCGGATCATGAAGTTGCAGCAAATGAGTAGCATTGATCACTTAGAAGCCAAGGCATCATCAAGAATAATAATGGAGATCAATATGAAGAAAAAAAAGAAGCAGCAGGAAAAAGATGAAGATCAACCATTAACATGGAGAAGTAAGGCGATGGGTGAGAGCTTGGAAGAAATCTCAAAGGAAATATCATGGGGACTCAAACATGAGATGGCAAAAATAGGTATGGCTTTACAACATCACATTTACGGAGACTTGATTGATGAGATGCTCACTGATATTATGCATTTTTCTTCAACTTTTTCCTCCTTTCATTCTTCTTCTATCCCTCCATTTGAAGCATGTAGGAGAAGACTTCGTTTCTAG AGGCTGTTAGAGAGGGAGAGTCTTGGAATCAATGAAGAGGCAGAACAGTCAGTTATCGTCCACTTCCCGCCGAGATCCTCCACCGGAGAGTCTTCGAGCTAAAAGCATCGGTTGCATGTCCGGCATTATTCATCTTCTCTCCAAGTACCAGAACCGCCACAAGAAATCCCTCACATTCGGAAAGAGTAAACAAGAGAAGGATATTATCGTGTTTTCTTCTACTTCACAAAATTCCGATCATACCTCAGTTTCTGCCGCCAGTATTTCCCCGGCTACTCCACCGCCACAGAGACAACGAAGGTCACGAAGTGACAAAAACAGAGAAGGAAAAGGAACGGAGGTTTTTGATTTCAGTCGGAAAAGAATCTCCTTCGATTTGCCGACGAGGAGTCCGACGCTTTCGGTGGAGATAAGGCGATCGAGTTCAGTGAACTCGCCGACGAAGATCGGAAAATCTCCCGCACTTGTAGCACGATTGATGGGACTAGAAGCTGTGCCGGCGGCGGAAGAAACGTCAAGAGAGAAGAGGAGGAAGCTTTTGGGAGCGTTGGAGAAATGTGATAATGATTTGAAGGCTCTGAAGAAGATAATCATGGCGTTTCGGTCACCGGAGATTGATCATCTACCGTCGATGGAAATTGCGGGGAACGGGGTGAATGGAGATAAAGTAGGAAGGATTTCAGTGCGGAAGTGTAGAGACTTTAGCTGTAGCGATGAGGAGAAGAAGCCTTGCAGTCGATTGCATCATCTGAACAGAATCAACCGTGCAGCCAAACAGCGTGAAAATGGTGGAGAAGAAACAAAGCAAGAGCCAAAGAAGAAGAATCCAGCAGCAATAATTGAAGAGGACAGAATAATCTCCATATCTTCCATAAACCCAATTACCAGATTACAGGAGCGGATCATGAAGTTGCAGCAAATGAGTAGCATTGATCACTTAGAAGCCAAGGCATCATCAAGAATAATAATGGAGATCAATATGAAGAAAAAAAAGAAGCAGCAGGAAAAAGATGAAGATCAACCATTAACATGGAGAAGTAAGGCGATGGGTGAGAGCTTGGAAGAAATCTCAAAGGAAATATCATGGGGACTCAAACATGAGATGGCAAAAATAGGTATGGCTTTACAACATCACATTTACGGAGACTTGATTGATGAGATGCTCACTGATATTATGCATTTTTCTTCAACTTTTTCCTCCTTTCATTCTTCTTCTATCCCTCCATTTGAAGCATGTAGGAGAAGACTTCGTTTCTAG ATGAAGAGGCAGAACAGTCAGTTATCGTCCACTTCCCGCCGAGATCCTCCACCGGAGAGTCTTCGAGCTAAAAGCATCGGTTGCATGTCCGGCATTATTCATCTTCTCTCCAAGTACCAGAACCGCCACAAGAAATCCCTCACATTCGGAAAGAGTAAACAAGAGAAGGATATTATCGTGTTTTCTTCTACTTCACAAAATTCCGATCATACCTCAGTTTCTGCCGCCAGTATTTCCCCGGCTACTCCACCGCCACAGAGACAACGAAGGTCACGAAGTGACAAAAACAGAGAAGGAAAAGGAACGGAGGTTTTTGATTTCAGTCGGAAAAGAATCTCCTTCGATTTGCCGACGAGGAGTCCGACGCTTTCGGTGGAGATAAGGCGATCGAGTTCAGTGAACTCGCCGACGAAGATCGGAAAATCTCCCGCACTTGTAGCACGATTGATGGGACTAGAAGCTGTGCCGGCGGCGGAAGAAACGTCAAGAGAGAAGAGGAGGAAGCTTTTGGGAGCGTTGGAGAAATGTGATAATGATTTGAAGGCTCTGAAGAAGATAATCATGGCGTTTCGGTCACCGGAGATTGATCATCTACCGTCGATGGAAATTGCGGGGAACGGGGTGAATGGAGATAAAGTAGGAAGGATTTCAGTGCGGAAGTGTAGAGACTTTAGCTGTAGCGATGAGGAGAAGAAGCCTTGCAGTCGATTGCATCATCTGAACAGAATCAACCGTGCAGCCAAACAGCGTGAAAATGGTGGAGAAGAAACAAAGCAAGAGCCAAAGAAGAAGAATCCAGCAGCAATAATTGAAGAGGACAGAATAATCTCCATATCTTCCATAAACCCAATTACCAGATTACAGGAGCGGATCATGAAGTTGCAGCAAATGAGTAGCATTGATCACTTAGAAGCCAAGGCATCATCAAGAATAATAATGGAGATCAATATGAAGAAAAAAAAGAAGCAGCAGGAAAAAGATGAAGATCAACCATTAACATGGAGAAGTAAGGCGATGGGTGAGAGCTTGGAAGAAATCTCAAAGGAAATATCATGGGGACTCAAACATGAGATGGCAAAAATAGGTATGGCTTTACAACATCACATTTACGGAGACTTGATTGATGAGATGCTCACTGATATTATGCATTTTTCTTCAACTTTTTCCTCCTTTCATTCTTCTTCTATCCCTCCATTTGAAGCATGTAGGAGAAGACTTCGTTTCTAG MKRQNSQLSSTSRRDPPPESLRAKSIGCMSGIIHLLSKYQNRHKKSLTFGKSKQEKDIIVFSSTSQNSDHTSVSAASISPATPPPQRQRRSRSDKNREGKGTEVFDFSRKRISFDLPTRSPTLSVEIRRSSSVNSPTKIGKSPALVARLMGLEAVPAAEETSREKRRKLLGALEKCDNDLKALKKIIMAFRSPEIDHLPSMEIAGNGVNGDKVGRISVRKCRDFSCSDEEKKPCSRLHHLNRINRAAKQRENGGEETKQEPKKKNPAAIIEEDRIISISSINPITRLQERIMKLQQMSSIDHLEAKASSRIIMEINMKKKKKQQEKDEDQPLTWRSKAMGESLEEISKEISWGLKHEMAKIGMALQHHIYGDLIDEMLTDIMHFSSTFSSFHSSSIPPFEACRRRLRF*
BLAST of Cucsa.022110.1 vs. TrEMBL
Match: A0A0A0L3D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G416180 PE=4 SV=1) HSP 1 Score: 796.6 bits (2056), Expect = 1.4e-227 Identity = 405/408 (99.26%), Postives = 405/408 (99.26%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. TrEMBL
Match: V7CUM7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G101500g PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.1e-45 Identity = 146/413 (35.35%), Postives = 218/413 (52.78%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. TrEMBL
Match: W9SW25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027942 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 151/436 (34.63%), Postives = 220/436 (50.46%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. TrEMBL
Match: A0A0S3RWS6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G252500 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43 Identity = 144/414 (34.78%), Postives = 215/414 (51.93%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. TrEMBL
Match: A0A0L9U784_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g204500 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43 Identity = 144/414 (34.78%), Postives = 215/414 (51.93%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. TAIR10
Match: AT3G56810.1 (AT3G56810.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 3.0e-06 Identity = 64/288 (22.22%), Postives = 109/288 (37.85%), Query Frame = 1
HSP 2 Score: 38.9 bits (89), Expect = 8.9e-03 Identity = 24/74 (32.43%), Postives = 42/74 (56.76%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. NCBI nr
Match: gi|778694591|ref|XP_011653835.1| (PREDICTED: uncharacterized protein LOC101223146 [Cucumis sativus]) HSP 1 Score: 796.6 bits (2056), Expect = 2.1e-227 Identity = 405/408 (99.26%), Postives = 405/408 (99.26%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. NCBI nr
Match: gi|502107493|ref|XP_004493281.1| (PREDICTED: uncharacterized protein LOC101488507 [Cicer arietinum]) HSP 1 Score: 193.7 bits (491), Expect = 6.1e-46 Identity = 148/418 (35.41%), Postives = 215/418 (51.44%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. NCBI nr
Match: gi|645270844|ref|XP_008240641.1| (PREDICTED: uncharacterized protein LOC103339132 [Prunus mume]) HSP 1 Score: 192.2 bits (487), Expect = 1.8e-45 Identity = 164/425 (38.59%), Postives = 219/425 (51.53%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. NCBI nr
Match: gi|593797584|ref|XP_007161830.1| (hypothetical protein PHAVU_001G101500g [Phaseolus vulgaris]) HSP 1 Score: 191.4 bits (485), Expect = 3.0e-45 Identity = 146/413 (35.35%), Postives = 218/413 (52.78%), Query Frame = 1
BLAST of Cucsa.022110.1 vs. NCBI nr
Match: gi|694436552|ref|XP_009345369.1| (PREDICTED: uncharacterized protein LOC103937177 [Pyrus x bretschneideri]) HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44 Identity = 153/423 (36.17%), Postives = 213/423 (50.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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