Cucsa.381320 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.381320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	GrpE protein homolog
Location	scaffold03850 : 69884 .. 71840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTAGACGAAGAAGAAGAGTTCCAATTCGTTTGCTCAATTCCAATTTGTAATTCTTATCAATGGCAGCTTTTGCTCTCTCCAATTACACTCTCTTTTCTCCTCGTCCTTCTTCTCCATTCCTTTCTTCTTCCTCTAAAACCCTAGATTCCTCATCCTCTTTTCACCAACCTCTTCCTCTTCTTCATAATCCTCGCCATCGCTCTCGTCTCTATGACCCATTATTTAGTTTCTCCCCCACCTCCTCTTCTTCTCCACTTACACGTCCTTTCGCATCCTGTCTTTCTGCTCATAATTCTGTTGCCAATGTACGTTAATCTCTCCATTTATCTGTTGCTGTGGTTGCTTAGAGTTCTTGTTTTTATCATTTATCGATGAAGTTTTTGCTCTCCTTCATTTCCCTCCCTCCGTTTTATTGTTATTTTTGTCTTTTTTATTGTGGATGTTTTGCTGTTTTTGAATTAATGTTTGAGACGGATTCTTAAATCCATTTTCTGGAACTTGGGTTTTCTGTCTCTGTGATATTGAATCAAGAAAGTCATGGAGATAGTTTGAGGAAGTTTTTGGATGAATTTTCTCATCAGGGTTAGAAGTTACAACAACTATATGTTTCAATTTGTTAGCACTCTGACTGAATTGAAAATTTTCAATGTGTTTAGTTTCATCATTTTAGGTTTTACAATATACCTAAGGATCCCTTTTTAGATATTTGTTTCATTACTAGTTGCTTAAGTTAGCTACTTTATCTTTTTCTTTATATGCTTATTCAATGTAGTTGTTGGTTCCTCCAATGAACAAAGGTAAACAACGAAGAGGATGATGGAAAAGCTATGGAAAAAGATGGATATAAGTTTGATGGATCTGGTTTGCAGACCCTCATCGAGGTGTACCGAGAAGCTTTTCTCGATGGAGATCAAAAGACTGTTTCTGAAGTCGAGGCAAGAATAAAAATAATTGGGAGGGAGAAAGATGAGTTGTCCCGGAAATTGATGAATATATCGACGGAGATGACGTCTGGAAAAGAGAAATATATACGCTTACAAGCTGACTTTGATAATTTTAGGAAAAGATCAGAAAAAGAACAACATACTGTGAAGAATAATGCTCAAAAGGAGGTTCTTGAGAGCCTATTACCAATGATTGACCATTTTGATAAAGCTAGACAACAAATTGTTCCTCAAACTGACAAGGAGAAGAAGATTGACATAAGTTACCAGGGAATATACAAGCAATTTGTGGAGACGTTGAGGAGCTGGCGTGTCTCGGCCGTTGCCACAGTAGGAAGACCATTTGATCCCTCAGTAAGTTCAATCTTATGACTAAAATTACCTTCATTTCAATGTAAAAACTTTTCTGTTTGATTCATTATCTCATGCTTGCTTATTTTTCTTACTATTACCAGATGGATTAGAATAGAATGAATGTTTATTTTCTTACTGTTTTCACTCGAAGTTCTTTGCAACTGATTCATGTTAAGTGTATCATTAATTTGAAATTGATAATGTCTGATGGGTGGGGGGATTTTTTTCTTTGGTTGCAGTTACATGAAGCTGTAGCACGAGAGGAGTCGCAGGAGATAAAGGAAGGGATCATTATTCAAGAATTAAGACGCGGGTTTCTGCTCGGTGAACGACTTCTAAGACCAGCAAGAGTAAAGGTTTCAAAGGGTCCCGGTAGGAAGAGCTCTCGCACAGTCGACGGCGAGCAACAACCTGCAGCTGCTGCTGTAGTAGATGAACACTGATCATTCACACCATTTTTGGTTCATCTCAAAAAAATGGATTCATCGTCTTCTTACAGCACCATGATGTAAATGTCTCTCCCAAACTTTCTTTTTCAACTAGGTTTTTGATTCTTACCATTTCAAGAGTTGAGTCATAAACCATTTTTTTTCTTTACCAGCAAGTCAATAGCAATCTATTTTCTTTCCTACACAAACTTATTGAGGATATAATTTAT

mRNA sequence

GGTAGACGAAGAAGAAGAGTTCCAATTCGTTTGCTCAATTCCAATTTGTAATTCTTATCAATGGCAGCTTTTGCTCTCTCCAATTACACTCTCTTTTCTCCTCGTCCTTCTTCTCCATTCCTTTCTTCTTCCTCTAAAACCCTAGATTCCTCATCCTCTTTTCACCAACCTCTTCCTCTTCTTCATAATCCTCGCCATCGCTCTCGTCTCTATGACCCATTATTTAGTTTCTCCCCCACCTCCTCTTCTTCTCCACTTACACGTCCTTTCGCATCCTGTCTTTCTGCTCATAATTCTGTTGCCAATGTAAACAACGAAGAGGATGATGGAAAAGCTATGGAAAAAGATGGATATAAGTTTGATGGATCTGGTTTGCAGACCCTCATCGAGGTGTACCGAGAAGCTTTTCTCGATGGAGATCAAAAGACTGTTTCTGAAGTCGAGGCAAGAATAAAAATAATTGGGAGGGAGAAAGATGAGTTGTCCCGGAAATTGATGAATATATCGACGGAGATGACGTCTGGAAAAGAGAAATATATACGCTTACAAGCTGACTTTGATAATTTTAGGAAAAGATCAGAAAAAGAACAACATACTGTGAAGAATAATGCTCAAAAGGAGGTTCTTGAGAGCCTATTACCAATGATTGACCATTTTGATAAAGCTAGACAACAAATTGTTCCTCAAACTGACAAGGAGAAGAAGATTGACATAAGTTACCAGGGAATATACAAGCAATTTGTGGAGACGTTGAGGAGCTGGCGTGTCTCGGCCGTTGCCACAGTAGGAAGACCATTTGATCCCTCATTACATGAAGCTGTAGCACGAGAGGAGTCGCAGGAGATAAAGGAAGGGATCATTATTCAAGAATTAAGACGCGGGTTTCTGCTCGGTGAACGACTTCTAAGACCAGCAAGAGTAAAGGTTTCAAAGGGTCCCGGTAGGAAGAGCTCTCGCACAGTCGACGGCGAGCAACAACCTGCAGCTGCTGCTGTAGTAGATGAACACTGATCATTCACACCATTTTTGGTTCATCTCAAAAAAATGGATTCATCGTCTTCTTACAGCACCATGATGTAAATGTCTCTCCCAAACTTTCTTTTTCAACTAGGTTTTTGATTCTTACCATTTCAAGAGTTGAGTCATAAACCATTTTTTTTCTTTACCAGCAAGTCAATAGCAATCTATTTTCTTTCCTACACAAACTTATTGAGGATATAATTTAT

Coding sequence (CDS)

ATGGCAGCTTTTGCTCTCTCCAATTACACTCTCTTTTCTCCTCGTCCTTCTTCTCCATTCCTTTCTTCTTCCTCTAAAACCCTAGATTCCTCATCCTCTTTTCACCAACCTCTTCCTCTTCTTCATAATCCTCGCCATCGCTCTCGTCTCTATGACCCATTATTTAGTTTCTCCCCCACCTCCTCTTCTTCTCCACTTACACGTCCTTTCGCATCCTGTCTTTCTGCTCATAATTCTGTTGCCAATGTAAACAACGAAGAGGATGATGGAAAAGCTATGGAAAAAGATGGATATAAGTTTGATGGATCTGGTTTGCAGACCCTCATCGAGGTGTACCGAGAAGCTTTTCTCGATGGAGATCAAAAGACTGTTTCTGAAGTCGAGGCAAGAATAAAAATAATTGGGAGGGAGAAAGATGAGTTGTCCCGGAAATTGATGAATATATCGACGGAGATGACGTCTGGAAAAGAGAAATATATACGCTTACAAGCTGACTTTGATAATTTTAGGAAAAGATCAGAAAAAGAACAACATACTGTGAAGAATAATGCTCAAAAGGAGGTTCTTGAGAGCCTATTACCAATGATTGACCATTTTGATAAAGCTAGACAACAAATTGTTCCTCAAACTGACAAGGAGAAGAAGATTGACATAAGTTACCAGGGAATATACAAGCAATTTGTGGAGACGTTGAGGAGCTGGCGTGTCTCGGCCGTTGCCACAGTAGGAAGACCATTTGATCCCTCATTACATGAAGCTGTAGCACGAGAGGAGTCGCAGGAGATAAAGGAAGGGATCATTATTCAAGAATTAAGACGCGGGTTTCTGCTCGGTGAACGACTTCTAAGACCAGCAAGAGTAAAGGTTTCAAAGGGTCCCGGTAGGAAGAGCTCTCGCACAGTCGACGGCGAGCAACAACCTGCAGCTGCTGCTGTAGTAGATGAACACTGA

Protein sequence

MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTSSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRTVDGEQQPAAAAVVDEH*

Homology

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BLAST of Cucsa.381320 vs. Swiss-Prot
Match: GRPE_PROM9 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-36
Identity = 83/222 (37.39%), Postives = 135/222 (60.81%), Query Frame = 1


Query: 78  NSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGRE 137
           N V N +N  +D  +  +   + D    Q   E+  E      + T+S  +AR++ + +E
Sbjct: 14  NDVLNQDNAPEDNSSAAEKTIENDELSPQKTEEINTEEL----KNTISNNDARLEQLEKE 73

Query: 138 KDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMID 197
            + L              K +Y+R+ ADFDNFRKR  ++Q  +K     + L ++LP++D
Sbjct: 74  HETL--------------KNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVD 133

Query: 198 HFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVARE 257
           +F++ARQQ+ P++++ + +  SYQG+YKQ VE L+   VS +  VG+ FDP+LHEAV RE
Sbjct: 134 NFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLRE 193

Query: 258 ESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSR 300
            S+E KE +I++EL+RG+ L  ++LR A VKVS G G+++S+
Sbjct: 194 PSEEFKEDLIVEELQRGYHLEGKVLRHALVKVSMGHGQQNSQ 217

[Close]

BLAST of Cucsa.381320 vs. Swiss-Prot
Match: GRPE_PROM0 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.9e-36
Identity = 84/227 (37.00%), Postives = 136/227 (59.91%), Query Frame = 1


Query: 84  NNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSR 143
           +N  +D  +M+    + D    Q   E+  E      + T+S  +AR++ + +E + L  
Sbjct: 20  DNAPEDKSSMQNSTTENDELSSQKTEEINTEEL----KNTISNNDARLEQLEKEHETL-- 79

Query: 144 KLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKAR 203
                       K +Y+R+ ADFDNFRKR  ++Q  +K     + L ++LP++D+F++AR
Sbjct: 80  ------------KNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERAR 139

Query: 204 QQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIK 263
           QQ+ P++++ + +  SYQG+YKQ VE L+   VS +  VG+ FDP+LHEAV RE S+E +
Sbjct: 140 QQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFE 199

Query: 264 EGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSR------TVDGE 305
           E  II+EL+RG+ L  ++LR A  KVS GPG++ S+      TV+G+
Sbjct: 200 EDFIIEELQRGYHLEGKVLRHALAKVSMGPGKQKSQQEVEKDTVEGD 228

[Close]

BLAST of Cucsa.381320 vs. Swiss-Prot
Match: GRPE_PROM2 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9215) GN=grpE PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 89/230 (38.70%), Postives = 137/230 (59.57%), Query Frame = 1


Query: 78  NSVANVNNEEDDGKAMEKDGYKFDGSGLQT-------LIEVYREAFLDGDQK-TVSEVEA 137
           N   N++N+E D     +D    D S  Q        L    +EA    + K T+S  +A
Sbjct: 4   NQSDNIDNKEKD--VSNQDNAPEDISSEQNSTNENDELTSQKKEAINTEELKNTISNNDA 63

Query: 138 RIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVL 197
           R+K + +E + L              K +Y+R+ ADFDNFRKR  ++Q  +K     + L
Sbjct: 64  RLKQLEKEHETL--------------KNQYVRISADFDNFRKRQSRDQDDLKIQIVSKTL 123

Query: 198 ESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPS 257
            ++LP++D+F++ARQQ+ P++++ + +  SYQG+YKQ VE L+   VS +  VG+ FDP+
Sbjct: 124 TAILPIVDNFERARQQLQPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPN 183

Query: 258 LHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSR 300
           LHEAV RE S+E  E  II+EL+RG+ L  ++LR A VKVS GPG+++S+
Sbjct: 184 LHEAVLREPSEESDEDFIIEELQRGYHLEGKVLRHALVKVSMGPGKQNSQ 217

[Close]

BLAST of Cucsa.381320 vs. Swiss-Prot
Match: GRPE_PROMS (Protein GrpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 86/222 (38.74%), Postives = 134/222 (60.36%), Query Frame = 1


Query: 78  NSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGRE 137
           N   N++N+E+D    ++D    + S  Q L     E      QKT       +K     
Sbjct: 4   NQSDNIDNKEND--LSDQDNALENVSSAQELTTENNEL---SSQKTEEINTEELKNSISN 63

Query: 138 KDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMID 197
            D    +L  +  E  + K +Y+R+ ADFDNFRKR  ++Q  +K     + L ++LP++D
Sbjct: 64  NDA---RLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVD 123

Query: 198 HFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVARE 257
           +F++ARQQ+ P++++ + +  SYQG+YKQ VE L+   VS +  VG+ FDPSLHEAV RE
Sbjct: 124 NFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLRE 183

Query: 258 ESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSR 300
            S++ +E  II+EL+RG+ L  ++LR A VKVS GPG+++S+
Sbjct: 184 PSEKFEEDFIIEELQRGYHLEGKVLRHALVKVSMGPGKQNSQ 217

[Close]

BLAST of Cucsa.381320 vs. Swiss-Prot
Match: GRPE_PROM4 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9211) GN=grpE PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 84/214 (39.25%), Postives = 128/214 (59.81%), Query Frame = 1


Query: 106 QTLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSR--------------KLMNISTE 165
           ++ +++ +EA    D+ ++S V    +  G E D  S               +L  +  E
Sbjct: 16  ESAVDLAQEAKPTSDEPSLSNVAEGSQEAGAETDVTSSDAKDSSSQALDNEARLEQLERE 75

Query: 166 MTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTD 225
             +   +Y+R+ ADFDNFRKR  ++Q  ++   Q   L S+LP++D+FD+ARQQ+ P+ +
Sbjct: 76  HETLNSQYMRIAADFDNFRKRQSRDQDDLRLQLQCNTLSSILPVVDNFDRARQQLNPEGE 135

Query: 226 KEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQEL 285
           + + +  SYQG+YKQ V+ L+   V+ +  VG+ FDPSLHEAV RE S E+ E II++EL
Sbjct: 136 EAQALHKSYQGLYKQLVDVLKQLGVAPMRVVGQTFDPSLHEAVLREPSDELAEDIIVEEL 195

Query: 286 RRGFLLGERLLRPARVKVSKGPGRKSSRTVDGEQ 306
           +RG+ L  R+LR A VKVS GPG K     DGE+
Sbjct: 196 QRGYHLNGRVLRHALVKVSMGPGPKD----DGEE 225

[Close]

BLAST of Cucsa.381320 vs. TrEMBL
Match: A0A0A0LQA8_CUCSA (GrpE protein homolog OS=Cucumis sativus GN=Csa_2G315400 PE=3 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 4.9e-175
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1


Query: 1   MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT 60
           MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT
Sbjct: 1   MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT 60

Query: 61  SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD 120
           SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD
Sbjct: 61  SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD 120

Query: 121 QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV 180
           QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV
Sbjct: 121 QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV 180

Query: 181 KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA 240
           KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA
Sbjct: 181 KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA 240

Query: 241 TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT 300
           TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT
Sbjct: 241 TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT 300

Query: 301 VDGEQQPAAAAVVDEH 317
           VDGEQQPAAAAVVDEH
Sbjct: 301 VDGEQQPAAAAVVDEH 316

[Close]

BLAST of Cucsa.381320 vs. TrEMBL
Match: E0CRD7_VITVI (GrpE protein homolog OS=Vitis vinifera GN=VIT_18s0001g04190 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 6.8e-84
Identity = 183/319 (57.37%), Postives = 228/319 (71.47%), Query Frame = 1


Query: 3   AFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTSS 62
           AF+LSN+ LF+P+PS        KTL            LH P H S+   P+  F  ++S
Sbjct: 2   AFSLSNHLLFTPKPS--------KTL-----------ALHPP-HPSK---PILGFRLSTS 61

Query: 63  SSPLTRPFASCLSAHNSVANVNNEED----DGKAMEKDGYKFDGSGLQTLIEVYREAFLD 122
           S  L R F   L+  +S    NNEE+    D K  + +  +   S L++LI+ Y++A LD
Sbjct: 62  SPILRRSFKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLD 121

Query: 123 GDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQH 182
           GD+K VSE+EA I  I  EK EL++K+  +S E+TSGKEKYIRLQADFDNFRKRSEKE+ 
Sbjct: 122 GDEKAVSEIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERL 181

Query: 183 TVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSA 242
           TV+ +AQ EV+ESLLPMID+F++A+QQI P+T+KEKKID SYQGIYKQFVE +RS  V+A
Sbjct: 182 TVRTDAQGEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAA 241

Query: 243 VATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSS 302
           VATVG+PFDP+LHEA+AREESQE KEGIIIQE+RRGFLLG+RLLRPA VKVS GPGRK +
Sbjct: 242 VATVGKPFDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKT 297

Query: 303 RTVDGEQ--QPAAAAVVDE 316
             V  +   QPA AA VDE
Sbjct: 302 SAVADKSTGQPATAAGVDE 297

[Close]

BLAST of Cucsa.381320 vs. TrEMBL
Match: B9RJC6_RICCO (GrpE protein homolog OS=Ricinus communis GN=RCOM_1033170 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.2e-83
Identity = 183/324 (56.48%), Postives = 233/324 (71.91%), Query Frame = 1


Query: 3   AFALSNYTLFSPRPSSP-FLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTS 62
           A + SN++L +P   SP F +   KTL++ S     LPL     H S+L+    S S  S
Sbjct: 2   AVSFSNHSLLAPPRLSPSFSAKPPKTLETKSIL---LPLQF---HHSKLH---LSNSTIS 61

Query: 63  SSSPLT------RPFASCLSAHNSVANVNNEE----DDGKAMEKDGYKFDGSGLQTLIEV 122
           +SSP+T      R F + L+  +S  + NNEE    +D KA++K         L  LI +
Sbjct: 62  NSSPVTNNHIERRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHLPSLTKLINI 121

Query: 123 YREAFLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRK 182
           Y+EA L GD++TV+++EARIKII     EL +K+ ++STE+TSGKEKYIRLQADFDNFRK
Sbjct: 122 YKEAILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRK 181

Query: 183 RSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETL 242
           RSEKE+HT++++AQ EV+ESLLPM+D F++A+QQI P+T+ EKKID SYQGIYKQFVE +
Sbjct: 182 RSEKERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIM 241

Query: 243 RSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSK 302
           RS +V+ VATVG+PFDPSLHEA+AREESQE KEGIIIQE RRGFLLG RLLRPA VKVS 
Sbjct: 242 RSLQVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSA 301

Query: 303 GPGRKSSRTVDGEQQPAAAAVVDE 316
           GPGRK +    G +QPA AA VD+
Sbjct: 302 GPGRKKAPV--GAEQPATAAGVDD 314

[Close]

BLAST of Cucsa.381320 vs. TrEMBL
Match: A0A0B0NCP0_GOSAR (GrpE protein homolog OS=Gossypium arboreum GN=F383_03151 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-76
Identity = 164/306 (53.59%), Postives = 210/306 (68.63%), Query Frame = 1


Query: 3   AFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTSS 62
           A + SN++LF    S+  L  S  T  +SS    P+  L+    R     P   FSP++ 
Sbjct: 2   AASFSNHSLFPSHFSASSLKPSKHTHIASS----PVQFLYQ---RPSFSKPFSGFSPSNL 61

Query: 63  SSPLTRP-------FASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREA 122
           S PL R        F + LSA  S    N +   G+         D  GL+ +I VYREA
Sbjct: 62  SFPLNRKNYPQRGTFKASLSAQESARTENVKASAGE---------DFPGLKAMIGVYREA 121

Query: 123 FLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEK 182
            L+GD + VSE+E+RI I+  EK+ L ++++ +S E+TSGKEKYIRLQADFDN+RKRSEK
Sbjct: 122 LLNGDDRIVSEIESRISILENEKNGLEKQVLELSAEITSGKEKYIRLQADFDNYRKRSEK 181

Query: 183 EQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWR 242
           E+ T +++A+ EV+ESLLPM+D F++A+QQI P+T+KEKKID+SYQGIYKQFVE +RS +
Sbjct: 182 ERLTARSDAKGEVMESLLPMVDSFERAKQQIKPETEKEKKIDMSYQGIYKQFVEIMRSLQ 241

Query: 243 VSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGR 302
           V+ V TVG+PFDPSLHEA+AREESQE KEGIIIQE RRGFLLG+RLLRPA VKVS GPG 
Sbjct: 242 VAVVPTVGKPFDPSLHEAIAREESQEFKEGIIIQEFRRGFLLGDRLLRPAMVKVSSGPGS 291

[Close]

BLAST of Cucsa.381320 vs. TrEMBL
Match: W9R7B8_9ROSA (GrpE protein homolog OS=Morus notabilis GN=L484_014934 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.9e-76
Identity = 160/324 (49.38%), Postives = 216/324 (66.67%), Query Frame = 1


Query: 3   AFALSNYTLFSP-RPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTS 62
           A +L N+++ +P RPS    SS   T   S S     P   +   R+ L +P   F  TS
Sbjct: 2   AISLPNHSVLAPLRPSVSLTSSKPTTTKPSKSLALCFPSSRHFHSRAHLRNPALGFPRTS 61

Query: 63  S----SSPLTRPFASCLSAHNSVANVN---------NEEDDGK--AMEKDGYKFDGSGLQ 122
           S     +  TR  AS +   ++  N++           E D K  +   D  +  G  L+
Sbjct: 62  SFAAPKTSTTRFAASAIFCFDAFVNIDLLWCNITKFQVEGDEKESSPSTDTLESSGLSLK 121

Query: 123 TLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADF 182
            L  +Y+EA LDGD++TV ++EARI +IG ++D+L  K+  ++ E+ SGKEKY+RLQADF
Sbjct: 122 NLFNLYKEAILDGDEQTVFDIEARIDVIGNDQDKLVEKVSTLTEEIKSGKEKYVRLQADF 181

Query: 183 DNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQ 242
           DNFRKRSEKE+ +V+++AQ EV+ESLLPM+D+F++A+QQI P+T+KEK+ID SYQGIYKQ
Sbjct: 182 DNFRKRSEKERLSVRSDAQGEVIESLLPMVDNFERAKQQIKPETEKEKQIDASYQGIYKQ 241

Query: 243 FVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPAR 302
           FVE LRS RV+ V TVG+PFDPSLHEA+AREESQE +EGIII+E RRGF+LG+RL+RP+ 
Sbjct: 242 FVEILRSLRVAVVPTVGKPFDPSLHEAIAREESQEFEEGIIIEEFRRGFILGDRLIRPSM 301

Query: 303 VKVSKGPGRKSSRTVDGEQQPAAA 311
           VKVS GPGR +S          AA
Sbjct: 302 VKVSSGPGRNASSVAPASSGTTAA 325

[Close]

BLAST of Cucsa.381320 vs. TAIR10
Match: AT1G36390.1 (AT1G36390.1 Co-chaperone GrpE family protein)

HSP 1 Score: 228.4 bits (581), Expect = 6.1e-60
Identity = 126/285 (44.21%), Postives = 187/285 (65.61%), Query Frame = 1


Query: 27  TLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTSSSSPLTRPFAS--CLSAHNSVANVN 86
           +  S SS  + LPL +N     R         P+  S  +++P       SAH +    N
Sbjct: 16  SFSSPSSSSKTLPLRNNLHFHGR---------PSPISPLISKPSRKFPIFSAHQT----N 75

Query: 87  NEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSRK 146
           N E+     + D        ++TLI  Y++A L+GD+ +V+E+E     I +EK+++ +K
Sbjct: 76  NSEEANSKQQAD--------VKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQK 135

Query: 147 LMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQ 206
           ++++S ++ S KE  IRLQADFDN RK+ +K++ + ++NA+ ++L+SLLP+ID F+KA+ 
Sbjct: 136 VLSLSMKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKL 195

Query: 207 QIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKE 266
           Q+   TDKEKKID SYQGIY+QFVE LR  RVS +ATVG+PFDP LHEA++REES+ +K 
Sbjct: 196 QVRVDTDKEKKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKA 255

Query: 267 GIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRTVDGEQQPAA 310
           GII +EL +GF+LG+R+LRPA+VKVS GP  K + +   E  P+A
Sbjct: 256 GIITEELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAAEEITPSA 279

[Close]

BLAST of Cucsa.381320 vs. TAIR10
Match: AT5G17710.2 (AT5G17710.2 Co-chaperone GrpE family protein)

HSP 1 Score: 206.5 bits (524), Expect = 2.5e-53
Identity = 106/236 (44.92%), Postives = 163/236 (69.07%), Query Frame = 1


Query: 80  VANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGREKD 139
           V N N   ++G+A E++      + +  L++ Y+EA  D ++  ++E+EA +K I  EK 
Sbjct: 92  VENENASAEEGEAEEEEA-----AVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKF 151

Query: 140 ELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHF 199
            L+ K+ ++S E++  +++ IR+ ADFDNFRKR+E+E+  + +NAQ EV+E+LL ++D+F
Sbjct: 152 LLADKVASLSNELSVERDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNF 211

Query: 200 DKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREES 259
           ++A+ QI  +T+ E+K+  SYQ IYKQFVE L S  V  V TVG+ FDP LHEA+ RE+S
Sbjct: 212 ERAKSQIKVETEGEEKVTNSYQSIYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDS 271

Query: 260 QEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRTVDGEQQPAAAAVVDE 316
            E +EGI+++E R+GFLLGERLLRP+ VKVS GPG +     +GE+  A  +  +E
Sbjct: 272 AEYEEGIVLEEYRKGFLLGERLLRPSMVKVSAGPGPEKPLEAEGEEATAQGSAEEE 322

[Close]

BLAST of Cucsa.381320 vs. TAIR10
Match: AT4G26780.1 (AT4G26780.1 Co-chaperone GrpE family protein)

HSP 1 Score: 69.7 bits (169), Expect = 3.7e-12
Identity = 74/306 (24.18%), Postives = 130/306 (42.48%), Query Frame = 1


Query: 17  SSPFLSSSSKTLDSSSSFHQPLPLLHNPRHR-----SRLYDP--LFSFSPTSSSSP---- 76
           S+  L + ++T   SS FH    L H+  H+       + D   L  F+ +SS+SP    
Sbjct: 21  SAVTLPARNQTPVFSSRFHS---LAHDFSHKLVPAQMSMMDSFALQRFNFSSSTSPESDE 80

Query: 77  -LTRPFASCLSAHNSVANVNNEEDDGKAMEK--DGYKFDGSGLQTLIEVYREAFLDGDQK 136
             T   AS  S     A  N    D ++ +   D  K    G +       E+  + D  
Sbjct: 81  KKTHTEASKTSEEKPTAEANQPGLDSESKDSVTDSAKRKRKGAKGAASSSSESDSESDDD 140

Query: 137 TVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKN 196
            +S  +  +K++  +++ LS K      E+   K+K +R  A+ +N   R+ ++    K 
Sbjct: 141 ELS-ADDLVKLVAEKEELLSEK----EEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKK 200

Query: 197 NAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDIS-------------YQGIY---KQ 256
            A +   +SLL + D+  +A   +    +   K+D S              +G+    KQ
Sbjct: 201 YAVQNFAKSLLDVADNLGRASSVV---KESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQ 260

Query: 257 FVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPAR 293
             E  + + +     +  PFDP+ H AV +       EG +   L+ G+ L +R++RPA 
Sbjct: 261 LAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAE 315

[Close]

BLAST of Cucsa.381320 vs. TAIR10
Match: AT5G55200.1 (AT5G55200.1 Co-chaperone GrpE family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 45/176 (25.57%), Postives = 80/176 (45.45%), Query Frame = 1


Query: 131 IKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLE 190
           +K++  ++D L  +  +I  EM   K+K++R  A+  N   R+ +   + K  A +    
Sbjct: 120 VKLVSEKEDLLKVQQKDIM-EM---KDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFAT 179

Query: 191 SLLPMIDHFDKARQQIVPQTDKEKKIDIS-------------YQGIY---KQFVETLRSW 250
           SLL + D+ ++A   +    +   KID S              +G+    KQ  E  R  
Sbjct: 180 SLLDVADNLERASSVV---KESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKA 239

Query: 251 RVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVS 291
            +     +  PF+P+ H AV +       +G I   L+ G+ L +R++RPA V V+
Sbjct: 240 GLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVT 288

[Close]

BLAST of Cucsa.381320 vs. NCBI nr
Match: gi|449466450|ref|XP_004150939.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus])

HSP 1 Score: 621.7 bits (1602), Expect = 7.1e-175
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1


Query: 1   MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT 60
           MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT
Sbjct: 1   MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT 60

Query: 61  SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD 120
           SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD
Sbjct: 61  SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD 120

Query: 121 QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV 180
           QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV
Sbjct: 121 QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV 180

Query: 181 KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA 240
           KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA
Sbjct: 181 KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA 240

Query: 241 TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT 300
           TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT
Sbjct: 241 TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT 300

Query: 301 VDGEQQPAAAAVVDEH 317
           VDGEQQPAAAAVVDEH
Sbjct: 301 VDGEQQPAAAAVVDEH 316

[Close]

BLAST of Cucsa.381320 vs. NCBI nr
Match: gi|659089167|ref|XP_008445362.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo])

HSP 1 Score: 590.5 bits (1521), Expect = 1.7e-165
Identity = 299/316 (94.62%), Postives = 307/316 (97.15%), Query Frame = 1


Query: 1   MAAFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPT 60
           MAAFALSNYTLFSPRPSSPFLSSSSKTLDS+S FHQPLPLLHNPRHRSRL DPLFSFSPT
Sbjct: 1   MAAFALSNYTLFSPRPSSPFLSSSSKTLDSTSPFHQPLPLLHNPRHRSRLCDPLFSFSPT 60

Query: 61  SSSSPLTRPFASCLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGD 120
           SSSSPLTR FA CLSAH+SVANVNNEEDDGKA+EKDGYKFDGS LQTLIEVYREAFLDGD
Sbjct: 61  SSSSPLTRSFAPCLSAHSSVANVNNEEDDGKAVEKDGYKFDGSSLQTLIEVYREAFLDGD 120

Query: 121 QKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTV 180
           QKTVSEVEARIKIIGREKDELSRKL NI TEMTSGKEKYIRLQADFDNFRKRSEKEQH V
Sbjct: 121 QKTVSEVEARIKIIGREKDELSRKLSNILTEMTSGKEKYIRLQADFDNFRKRSEKEQHNV 180

Query: 181 KNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA 240
           KNNAQKEV+ESLLPMIDHF+KARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA
Sbjct: 181 KNNAQKEVIESLLPMIDHFEKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVA 240

Query: 241 TVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT 300
           TVGRPFDPSLHEAVAREESQEIKEGI+IQELRRGFLLGERLLRPARVKVSKGPGRKSSRT
Sbjct: 241 TVGRPFDPSLHEAVAREESQEIKEGIVIQELRRGFLLGERLLRPARVKVSKGPGRKSSRT 300

Query: 301 VDGEQQPAAAAVVDEH 317
           +DG+QQPAAAA VDEH
Sbjct: 301 IDGKQQPAAAAGVDEH 316

[Close]

BLAST of Cucsa.381320 vs. NCBI nr
Match: gi|225459431|ref|XP_002285824.1| (PREDICTED: grpE protein homolog, mitochondrial [Vitis vinifera])

HSP 1 Score: 318.9 bits (816), Expect = 9.8e-84
Identity = 183/319 (57.37%), Postives = 228/319 (71.47%), Query Frame = 1


Query: 3   AFALSNYTLFSPRPSSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTSS 62
           AF+LSN+ LF+P+PS        KTL            LH P H S+   P+  F  ++S
Sbjct: 2   AFSLSNHLLFTPKPS--------KTL-----------ALHPP-HPSK---PILGFRLSTS 61

Query: 63  SSPLTRPFASCLSAHNSVANVNNEED----DGKAMEKDGYKFDGSGLQTLIEVYREAFLD 122
           S  L R F   L+  +S    NNEE+    D K  + +  +   S L++LI+ Y++A LD
Sbjct: 62  SPILRRSFKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLD 121

Query: 123 GDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQH 182
           GD+K VSE+EA I  I  EK EL++K+  +S E+TSGKEKYIRLQADFDNFRKRSEKE+ 
Sbjct: 122 GDEKAVSEIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERL 181

Query: 183 TVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSA 242
           TV+ +AQ EV+ESLLPMID+F++A+QQI P+T+KEKKID SYQGIYKQFVE +RS  V+A
Sbjct: 182 TVRTDAQGEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAA 241

Query: 243 VATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSS 302
           VATVG+PFDP+LHEA+AREESQE KEGIIIQE+RRGFLLG+RLLRPA VKVS GPGRK +
Sbjct: 242 VATVGKPFDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKT 297

Query: 303 RTVDGEQ--QPAAAAVVDE 316
             V  +   QPA AA VDE
Sbjct: 302 SAVADKSTGQPATAAGVDE 297

[Close]

BLAST of Cucsa.381320 vs. NCBI nr
Match: gi|255545570|ref|XP_002513845.1| (PREDICTED: protein GrpE [Ricinus communis])

HSP 1 Score: 318.2 bits (814), Expect = 1.7e-83
Identity = 183/324 (56.48%), Postives = 233/324 (71.91%), Query Frame = 1


Query: 3   AFALSNYTLFSPRPSSP-FLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTS 62
           A + SN++L +P   SP F +   KTL++ S     LPL     H S+L+    S S  S
Sbjct: 2   AVSFSNHSLLAPPRLSPSFSAKPPKTLETKSIL---LPLQF---HHSKLH---LSNSTIS 61

Query: 63  SSSPLT------RPFASCLSAHNSVANVNNEE----DDGKAMEKDGYKFDGSGLQTLIEV 122
           +SSP+T      R F + L+  +S  + NNEE    +D KA++K         L  LI +
Sbjct: 62  NSSPVTNNHIERRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHLPSLTKLINI 121

Query: 123 YREAFLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRK 182
           Y+EA L GD++TV+++EARIKII     EL +K+ ++STE+TSGKEKYIRLQADFDNFRK
Sbjct: 122 YKEAILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRK 181

Query: 183 RSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETL 242
           RSEKE+HT++++AQ EV+ESLLPM+D F++A+QQI P+T+ EKKID SYQGIYKQFVE +
Sbjct: 182 RSEKERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIM 241

Query: 243 RSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSK 302
           RS +V+ VATVG+PFDPSLHEA+AREESQE KEGIIIQE RRGFLLG RLLRPA VKVS 
Sbjct: 242 RSLQVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSA 301

Query: 303 GPGRKSSRTVDGEQQPAAAAVVDE 316
           GPGRK +    G +QPA AA VD+
Sbjct: 302 GPGRKKAPV--GAEQPATAAGVDD 314

[Close]

BLAST of Cucsa.381320 vs. NCBI nr
Match: gi|1009136535|ref|XP_015885577.1| (PREDICTED: protein GrpE [Ziziphus jujuba])

HSP 1 Score: 295.8 bits (756), Expect = 8.9e-77
Identity = 173/304 (56.91%), Postives = 214/304 (70.39%), Query Frame = 1


Query: 17  SSPFLSSSSKTLDSSSSFHQPLPLLHNPRHRSRLYDPLFSFSPTSSSSPLTRPFASCLSA 76
           SS      SKTL  S+     L +  +PR    +  P+  FS  +SSS L   F S L+A
Sbjct: 24  SSTTTKPPSKTLKYST-----LSVSSDPR--PLICKPIVGFS--NSSSLLRPSFNSHLAA 83

Query: 77  HNSVANVNNEEDDGKAMEKDGYKFDGS---GLQTLIEVYREAFLDGDQKTVSEVEARIKI 136
             SV+  N EED G++++       G     L+TLI+ Y+EA LDGD+KTV +VEARI  
Sbjct: 84  RYSVSTTNGEED-GQSVDSVVSGAGGQHVFSLKTLIKEYKEAILDGDEKTVLDVEARIDR 143

Query: 137 IGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLL 196
           I +E  EL +KL  ++ ++TSGKEKYIRLQADFDNFRKRSEKE+ TV+ NAQ EV+ESLL
Sbjct: 144 IEKEMHELDQKLSTLTADITSGKEKYIRLQADFDNFRKRSEKERLTVRTNAQGEVIESLL 203

Query: 197 PMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEA 256
           PM+D+F++A+QQI P+T+KE KID SYQGIYKQFVE +RS  V+ VATVG+PFDP LHEA
Sbjct: 204 PMVDNFERAKQQIKPETEKEIKIDASYQGIYKQFVEIMRSLHVAVVATVGKPFDPLLHEA 263

Query: 257 VAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSSRTV--DGEQQPAAAA 316
           +AREES E KEGIIIQE RRGFLLG+RLLRPA VKVS GPGRK +     +    PAA A
Sbjct: 264 IAREESHEFKEGIIIQEFRRGFLLGDRLLRPATVKVSSGPGRKKAPLTHENSSGPPAATA 317

The following BLAST results are available for this feature:

BLAST of Cucsa.381320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRPE_PROM9	3.4e-36	37.39	Protein GrpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1	[more]
GRPE_PROM0	9.9e-36	37.00	Protein GrpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1	[more]
GRPE_PROM2	1.7e-35	38.70	Protein GrpE OS=Prochlorococcus marinus (strain MIT 9215) GN=grpE PE=3 SV=1	[more]
GRPE_PROMS	2.2e-35	38.74	Protein GrpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1	[more]
GRPE_PROM4	2.2e-35	39.25	Protein GrpE OS=Prochlorococcus marinus (strain MIT 9211) GN=grpE PE=3 SV=1	[more]

BLAST of Cucsa.381320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQA8_CUCSA	4.9e-175	100.00	GrpE protein homolog OS=Cucumis sativus GN=Csa_2G315400 PE=3 SV=1	[more]
E0CRD7_VITVI	6.8e-84	57.37	GrpE protein homolog OS=Vitis vinifera GN=VIT_18s0001g04190 PE=3 SV=1	[more]
B9RJC6_RICCO	1.2e-83	56.48	GrpE protein homolog OS=Ricinus communis GN=RCOM_1033170 PE=3 SV=1	[more]
A0A0B0NCP0_GOSAR	1.8e-76	53.59	GrpE protein homolog OS=Gossypium arboreum GN=F383_03151 PE=3 SV=1	[more]
W9R7B8_9ROSA	8.9e-76	49.38	GrpE protein homolog OS=Morus notabilis GN=L484_014934 PE=3 SV=1	[more]

BLAST of Cucsa.381320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G36390.1	6.1e-60	44.21	Co-chaperone GrpE family protein	[more]
AT5G17710.2	2.5e-53	44.92	Co-chaperone GrpE family protein	[more]
AT4G26780.1	3.7e-12	24.18	Co-chaperone GrpE family protein	[more]
AT5G55200.1	1.6e-07	25.57	Co-chaperone GrpE family protein	[more]

BLAST of Cucsa.381320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466450\|ref\|XP_004150939.1\|	7.1e-175	100.00	PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus]	[more]
gi\|659089167\|ref\|XP_008445362.1\|	1.7e-165	94.62	PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo]	[more]
gi\|225459431\|ref\|XP_002285824.1\|	9.8e-84	57.37	PREDICTED: grpE protein homolog, mitochondrial [Vitis vinifera]	[more]
gi\|255545570\|ref\|XP_002513845.1\|	1.7e-83	56.48	PREDICTED: protein GrpE [Ricinus communis]	[more]
gi\|1009136535\|ref\|XP_015885577.1\|	8.9e-77	56.91	PREDICTED: protein GrpE [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000740	GrpE
IPR009012	GrpE_head
IPR013805	GrpE_coiled_coil

Vocabulary: **Molecular Function**
Term	Definition
GO:0000774	adenyl-nucleotide exchange factor activity
GO:0042803	protein homodimerization activity
GO:0051087	chaperone binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016043	cellular component organization
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006457	protein folding
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0044702	single organism reproductive process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.381320.1	Cucsa.381320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 188..203 score: 9.4E-24coord: 270..289 score: 9.4E-24coord: 160..176 score: 9.4E-24coord: 243..258 score: 9.4
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 84..291 score: 1
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 3..37 score: 6.1E-118coord: 61..294 score: 6.1E
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 136..291 score: 4.6
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 246..289 scor
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	G3DSA:2.30.22.10		coord: 236..293 score: 5.6
IPR009012	GrpE nucleotide exchange factor, head	unknown	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 238..293 score: 1.24
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	G3DSA:3.90.20.20		coord: 136..232 score: 1.8
None	No IPR available	unknown	Coil	Coil	coord: 124..144 scor
None	No IPR available	PANTHER	PTHR21237:SF4	GRPE PROTEIN HOMOLOG	coord: 3..37 score: 6.1E-118coord: 61..294 score: 6.1E
None	No IPR available	unknown	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 139..233 score: 7.19

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.381320	Csa2G315400	Cucumber (Chinese Long) v2	cgycuB534
Cucsa.381320	MELO3C011373	Melon (DHL92) v3.5.1	cgymeB621
Cucsa.381320	ClCG08G010900	Watermelon (Charleston Gray)	cgywcgB651
Cucsa.381320	CSPI02G15970	Wild cucumber (PI 183967)	cgycpiB563
Cucsa.381320	MELO3C011373.2	Melon (DHL92) v3.6.1	cgymedB616
Cucsa.381320	CsaV3_1G023030	Cucumber (Chinese Long) v3	cgycucB578
Cucsa.381320	Cla97C08G153790	Watermelon (97103) v2	cgywmbB655
Cucsa.381320	Bhi04G000593	Wax gourd	cgywgoB759

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None