Cucsa.370520 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTATACCTTTTGTCCCACGGACCAAGAATTATTATGTTATTATCTTTATCACAAAATAGTTGGGGGTTTCGTACCACCAATTATGTTACCCGTCATAGACATTTATACAAAAGAGCCTCCTCAAATATGGCAACAATGTGGAGGGGTTGATGGTCAGGATGTTCATTTGTTCACTTGTCTTAAGAAGAAAAAaTCCCGTGTTGTAAGAAAAGTTGGTCCCAATGGAGCCATATGGAGCGGTGAAAGCAAAGCAACTAAAGTGTTTTCTCACAATAATACTTTGGTTGGTGCTTTTAAACGGTTTCATTTTGAAAATCCTAAAATGAAGAAGGATGGTGATCATAATAATAATTACTCGTGGATCATGTATGAGTACACTCTTCACCCTAATCTTGTACCTGAAGGAGTTGTACATGACTCTTTTGTACTAT ATGGGCTATACCTTTTGTCCCACGGACCAAGAATTATTATGTTATTATCTTTATCACAAAATAGTTGGGGGTTTCGTACCACCAATTATGTTACCCGTCATAGACATTTATACAAAAGAGCCTCCTCAAATATGGCAACAATGTGGAGGGGTTGATGGTCAGGATGTTCATTTGTTCACTTGTCTTAAGAAGAAAAAATCCCGTGTTGTAAGAAAAGTTGGTCCCAATGGAGCCATATGGAGCGGTGAAAGCAAAGCAACTAAAGTGTTTTCTCACAATAATACTTTGGTTGGTGCTTTTAAACGGTTTCATTTTGAAAATCCTAAAATGAAGAAGGATGGTGATCATAATAATAATTACTCGTGGATCATGTATGAGTACACTCTTCACCCTAATCTTGTACCTGAAGGAGTTGTACATGACTCTTTTGTACTAT ATGGGCTATACCTTTTGTCCCACGGACCAAGAATTATTATGTTATTATCTTTATCACAAAATAGTTGGGGGTTTCGTACCACCAATTATGTTACCCGTCATAGACATTTATACAAAAGAGCCTCCTCAAATATGGCAACAATGTGGAGGGGTTGATGGTCAGGATGTTCATTTGTTCACTTGTCTTAAGAAGAAAAAaTCCCGTGTTGTAAGAAAAGTTGGTCCCAATGGAGCCATATGGAGCGGTGAAAGCAAAGCAACTAAAGTGTTTTCTCACAATAATACTTTGGTTGGTGCTTTTAAACGGTTTCATTTTGAAAATCCTAAAATGAAGAAGGATGGTGATCATAATAATAATTACTCGTGGATCATGTATGAGTACACTCTTCACCCTAATCTTGTACCTGAAGGAGTTGTACATGACTCTTTTGTACTAT MGYTFCPTDQELLCYYLYHKIVGGFVPPIMLPVIDIYTKEPPQIWQQCGGVDGQDVHLFTCLKKKKSRVVRKVGPNGAIWSGESKATKVFSHNNTLVGAFKRFHFENPKMKKDGDHNNNYSWIMYEYTLHPNLVPEGVVHDSFVLX
BLAST of Cucsa.370520 vs. TrEMBL
Match: A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-77 Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 1
BLAST of Cucsa.370520 vs. TrEMBL
Match: A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 6.2e-72 Identity = 129/147 (87.76%), Postives = 133/147 (90.48%), Query Frame = 1
BLAST of Cucsa.370520 vs. TrEMBL
Match: A0A0A0LFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.2e-16 Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 1
BLAST of Cucsa.370520 vs. TrEMBL
Match: V4S8B0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013622mg PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15 Identity = 59/155 (38.06%), Postives = 88/155 (56.77%), Query Frame = 1
BLAST of Cucsa.370520 vs. TrEMBL
Match: V4S882_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013879mg PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.5e-14 Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 1
BLAST of Cucsa.370520 vs. TAIR10
Match: AT4G17980.1 (AT4G17980.1 NAC domain containing protein 71) HSP 1 Score: 51.2 bits (121), Expect = 6.2e-07 Identity = 40/135 (29.63%), Postives = 62/135 (45.93%), Query Frame = 1
BLAST of Cucsa.370520 vs. TAIR10
Match: AT3G29035.1 (AT3G29035.1 NAC domain containing protein 3) HSP 1 Score: 48.1 bits (113), Expect = 5.2e-06 Identity = 36/131 (27.48%), Postives = 58/131 (44.27%), Query Frame = 1
BLAST of Cucsa.370520 vs. NCBI nr
Match: gi|700210011|gb|KGN65107.1| (hypothetical protein Csa_1G224380 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 1.8e-77 Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 1
BLAST of Cucsa.370520 vs. NCBI nr
Match: gi|700201123|gb|KGN56256.1| (hypothetical protein Csa_3G110040 [Cucumis sativus]) HSP 1 Score: 278.1 bits (710), Expect = 8.8e-72 Identity = 129/147 (87.76%), Postives = 133/147 (90.48%), Query Frame = 1
BLAST of Cucsa.370520 vs. NCBI nr
Match: gi|659085728|ref|XP_008443570.1| (PREDICTED: NAC domain-containing protein 55-like [Cucumis melo]) HSP 1 Score: 184.9 bits (468), Expect = 1.0e-43 Identity = 86/147 (58.50%), Postives = 116/147 (78.91%), Query Frame = 1
BLAST of Cucsa.370520 vs. NCBI nr
Match: gi|778664815|ref|XP_011660358.1| (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus]) HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43 Identity = 85/147 (57.82%), Postives = 113/147 (76.87%), Query Frame = 1
BLAST of Cucsa.370520 vs. NCBI nr
Match: gi|645288058|ref|XP_008245708.1| (PREDICTED: NAC domain-containing protein 67-like [Prunus mume]) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18 Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |