Cucsa.365900 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACTCCGTGGTCGTCCCCCAGGAGGTAAGAAACGGTCCTCCAACAAGAAACATAACTTAGGATATGCCCACGTTAGTGAGACTACCACTGCCAACACTTCTCAATCAACTGACCTTACTACAAGCCAGACCAAGACTCCTACTTTGGGTGTCATTGCTCAGTTAGGTATGCTTCAGTCCCTTGGGCTTATTAGCGTTGATGGGAAGAATTCCTTGAATCTAGACTCGGGGGCTACAGATCACTGGACAAGTTTTTTGGAGCACTTTATCTTTTATGCCCCATGTGTCAGTAATGAAAAAGTTCAAGTAGTCAATGACCCTCTAGCCCCAATTACTAGCAAAGGACAAATAGCTCCCTTTTATGATTTTGCTCTCCATAATGTTTTGCATGTGCCTAAATTGTCTTACAATTTGCTATCTATAAGCAAGATCACTCGTGAGCTGCATTGTAAAGTTATCTTCTTACCTGAATCTGTCTGTTTTCAGGACATGAGCTCGAGGAGGACGATTGTGATTGCCCAGCATAGCGGAGGACTTTACATTCTTGATGATGATACCTTCGGTAGTAGTTTCTCTAGGGCTAGTTTACTGCCTTGCTTTAGCACTTCTAAACATGATTGTATGTTGTGGCATTTTCGGTTGAGCCACCCAAACTTTAGGTATATGCAATATTTGTTTCTCCATCCTTTTTCTAAACGTGATGTCTCCTCTCTATCTCGTGATGTGTGTATTCGGGTTAAACAACATTGGGTTTCATTTTCCTTACAACCATATAAACATATACAACTGTTTACCCTTATCCATAATAACGTTTGAGGTCCTTCCAAGGTCACCACCTCATTTGGGAAACGGTGGTTTGTAACTTTCATTGATGATCATACTCGTTTTATGATAGAACACTAATATAGTGTTTCTATTTTATTGATATCTCAAACACAAATTACAATATGAAAGACTAGTGATCCTCATGAGATGAATCACGTTAACCAAAAGTCACATTCAACAAACAATTACCTCTCCTAAACAGAAAACTTAAGAACAAAGCAATACAAAATCACAAAATGAACTTAGAACAAAAGAACCTTGCCCTCTGCTTTTCCTCTTTCTCAAGGAGTAATCCAATCATATTCCTTCACCATAATCTTCATGCCTTTCTTCCCTCCCCAACTTCCTATTTATAACCATCTAACTGCCAACAAATCTAATTACCCTTATACCTCTGCCCTATACTAATCTAGGTATCTAACATCTTACTTAGGTCTATTACCGATAAATCCGAGGTTTCATCTATTTTCCAAAACTTCTACCACACCATTGAAACACAATTCCATACAAAAATTGCAATTATTGGAAGTGATAATTTATGGTCTGGAATTTCAAAACCATAACCTTAGTGAATTCTTAGCCTCCAAGTCCCTTATGCTATCTACTTCCCTTCCTTCGTACCTGTAAGGAGATGTTATTCTTACAGCAGCCTATTTAATCAATAGAATGTCTTCTCGTATCCTCCACCTTCATACTCCCTTAGATTGTCTTAAGCAGTCGCTGCAGTCCTACCCTTCTACTCTTCTAATTTCTGAGGTTTCCCTCCTTGTGTTTAGGTGTACCACTTGTGTCCATAATTTTGGCCCTAATCAACCATGTGTGTTCGTTGGGTATCCCCTTCATCAATGCAGTTATAAATGTTTTCATCCGTCGTGTAGGAAATACTTCGATACTATGGATGTTACCTTCTGTGAGGACAAACCCTACTTTCTTGTTAGCCATCTTCAAGGGGAGAGTGAGTGA aaactccgtggtcgtcccccaggaggtaagaaacggtcctccaacaagaaacataacTTAGGATATGCCCACGTTAGTGAGACTACCACTGCCAACACTTCTCAATCAACTGACCTTACTACAAGCCAGACCAAGACTCctactttgggtgtcattgctcagttaggtatgcttcagtcccttgggcttattagcgttgatgggaagaattccttgaatctagactcgggggctacagatcactggacaagttttttggagcactttatcttttatgccccatgtgtcagtaatgaaaaagttcaagtagtcaatgaccctctagccccaattactagcaaaggacaaatagctcccttttatgattttgctctccataatgttttgcatgtgcctaaattgtcttacaatttgctatctataagcaagatcactcgtgagctgcattgtaaagttatcttcttacctgaatctgtctgttttcaggacatgagctcgaggaggacgattgtgattgcccagcatagcggaggactttacattcttgatgatgataccttcggtagtagtttctctagggctagtttactgccttgctttagcacttctaaacatgattgtatgttgtggcattttcggttgagccacccaaactttaggtatatgcaatatttgtttctccatcctttttctaaacgtgatgtctcctctctatctcgtgatgtgtgtattcgggttaaacaacattgggtttcattttccttacaaccatataaacatatacaactgtttacccttatccataataacgtatctaAcatcttacttaggtctattaccgataaatccgaggtttcatctattttccaaaacttctaccacaccattgaaacacaattccatacaaaaattgcaattattggaagagatgttattcttacagcagcctatttaatcaatagaatgtcttctcgtatcctccaccttcatactcccttagattgtcttaagcagtcgctgcagtcctacccttctactcttctaatttctgaggtttccctccttgtgtttaggtgtaccacttgtgtccataattttggccctaatcaaccatgtgtgttcgttgggtatccccttcatcaatgcagttataaatgttttcatccgtcgtgtaggaaatacttcgatactatggatgttaccttctgtgaggacaaaccctactttcttgttagccatcttcaaggggagagtgagtga AAACTCCGTGGTCGTCCCCCAGGAGGTAAGAAACGGTCCTCCAACAAGAAACATAACTTAGGATATGCCCACGTTAGTGAGACTACCACTGCCAACACTTCTCAATCAACTGACCTTACTACAAGCCAGACCAAGACTCCTACTTTGGGTGTCATTGCTCAGTTAGGTATGCTTCAGTCCCTTGGGCTTATTAGCGTTGATGGGAAGAATTCCTTGAATCTAGACTCGGGGGCTACAGATCACTGGACAAGTTTTTTGGAGCACTTTATCTTTTATGCCCCATGTGTCAGTAATGAAAAAGTTCAAGTAGTCAATGACCCTCTAGCCCCAATTACTAGCAAAGGACAAATAGCTCCCTTTTATGATTTTGCTCTCCATAATGTTTTGCATGTGCCTAAATTGTCTTACAATTTGCTATCTATAAGCAAGATCACTCGTGAGCTGCATTGTAAAGTTATCTTCTTACCTGAATCTGTCTGTTTTCAGGACATGAGCTCGAGGAGGACGATTGTGATTGCCCAGCATAGCGGAGGACTTTACATTCTTGATGATGATACCTTCGGTAGTAGTTTCTCTAGGGCTAGTTTACTGCCTTGCTTTAGCACTTCTAAACATGATTGTATGTTGTGGCATTTTCGGTTGAGCCACCCAAACTTTAGGTATATGCAATATTTGTTTCTCCATCCTTTTTCTAAACGTGATGTCTCCTCTCTATCTCGTGATGTGTGTATTCGGGTTAAACAACATTGGGTTTCATTTTCCTTACAACCATATAAACATATACAACTGTTTACCCTTATCCATAATAACGTATCTAACATCTTACTTAGGTCTATTACCGATAAATCCGAGGTTTCATCTATTTTCCAAAACTTCTACCACACCATTGAAACACAATTCCATACAAAAATTGCAATTATTGGAAGAGATGTTATTCTTACAGCAGCCTATTTAATCAATAGAATGTCTTCTCGTATCCTCCACCTTCATACTCCCTTAGATTGTCTTAAGCAGTCGCTGCAGTCCTACCCTTCTACTCTTCTAATTTCTGAGGTTTCCCTCCTTGTGTTTAGGTGTACCACTTGTGTCCATAATTTTGGCCCTAATCAACCATGTGTGTTCGTTGGGTATCCCCTTCATCAATGCAGTTATAAATGTTTTCATCCGTCGTGTAGGAAATACTTCGATACTATGGATGTTACCTTCTGTGAGGACAAACCCTACTTTCTTGTTAGCCATCTTCAAGGGGAGAGTGAGTGA KLRGRPPGGKKRSSNKKHNLGYAHVSETTTANTSQSTDLTTSQTKTPTLGVIAQLGMLQSLGLISVDGKNSLNLDSGATDHWTSFLEHFIFYAPCVSNEKVQVVNDPLAPITSKGQIAPFYDFALHNVLHVPKLSYNLLSISKITRELHCKVIFLPESVCFQDMSSRRTIVIAQHSGGLYILDDDTFGSSFSRASLLPCFSTSKHDCMLWHFRLSHPNFRYMQYLFLHPFSKRDVSSLSRDVCIRVKQHWVSFSLQPYKHIQLFTLIHNNVSNILLRSITDKSEVSSIFQNFYHTIETQFHTKIAIIGRDVILTAAYLINRMSSRILHLHTPLDCLKQSLQSYPSTLLISEVSLLVFRCTTCVHNFGPNQPCVFVGYPLHQCSYKCFHPSCRKYFDTMDVTFCEDKPYFLVSHLQGESE*
BLAST of Cucsa.365900 vs. TrEMBL
Match: A5ALJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034932 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47 Identity = 137/405 (33.83%), Postives = 200/405 (49.38%), Query Frame = 1
BLAST of Cucsa.365900 vs. TrEMBL
Match: A5BS42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002211 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.8e-42 Identity = 134/447 (29.98%), Postives = 212/447 (47.43%), Query Frame = 1
BLAST of Cucsa.365900 vs. TrEMBL
Match: A5C7R1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024166 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 8.6e-42 Identity = 132/382 (34.55%), Postives = 186/382 (48.69%), Query Frame = 1
BLAST of Cucsa.365900 vs. TrEMBL
Match: A5C7R1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024166 PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 4.3e-01 Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 1
HSP 2 Score: 33.9 bits (76), Expect = 5.8e+02 Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 1
HSP 3 Score: 179.1 bits (453), Expect = 1.1e-41 Identity = 124/367 (33.79%), Postives = 180/367 (49.05%), Query Frame = 1
BLAST of Cucsa.365900 vs. TrEMBL
Match: A5C6A5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042891 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.4e-38 Identity = 119/358 (33.24%), Postives = 173/358 (48.32%), Query Frame = 1
BLAST of Cucsa.365900 vs. NCBI nr
Match: gi|147805017|emb|CAN60373.1| (hypothetical protein VITISV_034932 [Vitis vinifera]) HSP 1 Score: 197.2 bits (500), Expect = 5.7e-47 Identity = 137/405 (33.83%), Postives = 200/405 (49.38%), Query Frame = 1
BLAST of Cucsa.365900 vs. NCBI nr
Match: gi|147784156|emb|CAN77225.1| (hypothetical protein VITISV_002211 [Vitis vinifera]) HSP 1 Score: 180.6 bits (457), Expect = 5.5e-42 Identity = 134/447 (29.98%), Postives = 212/447 (47.43%), Query Frame = 1
BLAST of Cucsa.365900 vs. NCBI nr
Match: gi|147863556|emb|CAN84036.1| (hypothetical protein VITISV_024166 [Vitis vinifera]) HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41 Identity = 132/382 (34.55%), Postives = 186/382 (48.69%), Query Frame = 1
BLAST of Cucsa.365900 vs. NCBI nr
Match: gi|147863556|emb|CAN84036.1| (hypothetical protein VITISV_024166 [Vitis vinifera]) HSP 1 Score: 44.3 bits (103), Expect = 6.2e-01 Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 1
HSP 2 Score: 33.9 bits (76), Expect = 8.3e+02 Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 1
HSP 3 Score: 179.1 bits (453), Expect = 1.6e-41 Identity = 124/367 (33.79%), Postives = 180/367 (49.05%), Query Frame = 1
BLAST of Cucsa.365900 vs. NCBI nr
Match: gi|147792973|emb|CAN73102.1| (hypothetical protein VITISV_042891 [Vitis vinifera]) HSP 1 Score: 167.5 bits (423), Expect = 4.8e-38 Identity = 119/358 (33.24%), Postives = 173/358 (48.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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