Cucsa.365710 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACACATTAATTGTGAGTATATCATTTATTTGCTTGTTTTTTATTTAGTTGGTCTTGCTCAAATATCTGAAAATCTAAATTCAATCCCTAAGTTGAACAGATTGAATTTCAAGATTTGGAATGAAAGCCTAGAGATACTTCTCAAGTGTATGGATCTAAACCTTGCATTAAGAACCAATAAATCTGCTTCTAATAAGGAACAATCGAATATGGCTAATATTGAGAAGTGGGAACGGTCACATCGCATGAGTTTGATGATTATTAGGCACTCCATTCGAGAGCCATTTCGGTGTTCTATCACTAAAAGTGAAAATGCCAAAAAGTTTCTTGCCAAAATTGAAAAATATTTTGCTAAAAAAGAAAAaGGGGAAGCAAGTAGTTTTTTTACTACTTTTAACTTCCATGAG ATGACACACATTAATTGTGAGTATATCATTTATTTGCTTGTTTTTTATTTAGTTGGTCTTGCTCAAATATCTGAAAATCTAAATTCAATCCCTAAGTTGAACAGATTGAATTTCAAGATTTGGAATGAAAGCCTAGAGATACTTCTCAAGTGTATGGATCTAAACCTTGCATTAAGAACCAATAAATCTGCTTCTAATAAGGAACAATCGAATATGGCTAATATTGAGAAGTGGGAACGGTCACATCGCATGAGTTTGATGATTATTAGGCACTCCATTCGAGAGCCATTTCGGTGTTCTATCACTAAAAGTGAAAATGCCAAAAAGTTTCTTGCCAAAATTGAAAAATATTTTGCTAAAAAAGAAAAAGGGGAAGCAAGTAGTTTTTTTACTACTTTTAACTTCCATGAG ATGACACACATTAATTGTGAGTATATCATTTATTTGCTTGTTTTTTATTTAGTTGGTCTTGCTCAAATATCTGAAAATCTAAATTCAATCCCTAAGTTGAACAGATTGAATTTCAAGATTTGGAATGAAAGCCTAGAGATACTTCTCAAGTGTATGGATCTAAACCTTGCATTAAGAACCAATAAATCTGCTTCTAATAAGGAACAATCGAATATGGCTAATATTGAGAAGTGGGAACGGTCACATCGCATGAGTTTGATGATTATTAGGCACTCCATTCGAGAGCCATTTCGGTGTTCTATCACTAAAAGTGAAAATGCCAAAAAGTTTCTTGCCAAAATTGAAAAATATTTTGCTAAAAAAGAAAAaGGGGAAGCAAGTAGTTTTTTTACTACTTTTAACTTCCATGAG MTHINCEYIIYLLVFYLVGLAQISENLNSIPKLNRLNFKIWNESLEILLKCMDLNLALRTNKSASNKEQSNMANIEKWERSHRMSLMIIRHSIREPFRCSITKSENAKKFLAKIEKYFAKKEKGEASSFFTTFNFHE
BLAST of Cucsa.365710 vs. TrEMBL
Match: A0A0B2NVV3_GLYSO (Uncharacterized protein (Fragment) OS=Glycine soja GN=glysoja_008082 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-23 Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of Cucsa.365710 vs. TrEMBL
Match: A0A151RDF9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_038014 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23 Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 1
BLAST of Cucsa.365710 vs. TrEMBL
Match: A0A151UI88_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_050268 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.5e-23 Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 1
BLAST of Cucsa.365710 vs. TrEMBL
Match: A0A151S1C3_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_029697 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-21 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cucsa.365710 vs. TrEMBL
Match: A0A151RB35_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_038971 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.8e-20 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of Cucsa.365710 vs. TAIR10
Match: AT5G53670.1 (AT5G53670.1 unknown protein) HSP 1 Score: 79.0 bits (193), Expect = 2.6e-15 Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = 1
BLAST of Cucsa.365710 vs. NCBI nr
Match: gi|659102484|ref|XP_008452157.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103493262 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 4.9e-32 Identity = 78/104 (75.00%), Postives = 83/104 (79.81%), Query Frame = 1
BLAST of Cucsa.365710 vs. NCBI nr
Match: gi|571540926|ref|XP_006601635.1| (PREDICTED: uncharacterized protein LOC102662751 [Glycine max]) HSP 1 Score: 121.7 bits (304), Expect = 9.9e-25 Identity = 58/112 (51.79%), Postives = 83/112 (74.11%), Query Frame = 1
BLAST of Cucsa.365710 vs. NCBI nr
Match: gi|1012116575|ref|XP_015961265.1| (PREDICTED: uncharacterized protein LOC107485266 [Arachis duranensis]) HSP 1 Score: 119.8 bits (299), Expect = 3.8e-24 Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = 1
BLAST of Cucsa.365710 vs. NCBI nr
Match: gi|1012196934|ref|XP_015972117.1| (PREDICTED: uncharacterized protein LOC107495482 [Arachis duranensis]) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1
BLAST of Cucsa.365710 vs. NCBI nr
Match: gi|1012204318|ref|XP_015931468.1| (PREDICTED: uncharacterized protein LOC107457801 [Arachis duranensis]) HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23 Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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