Cucsa.343030 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCGTCTTTCCTTTCTTTCTTTCTTCATCTTAATACCATGGCACTTCCTAAAATCATCGTCTGTCTTCTTGCGTCCTCTCTTCTCGTTCTTTGTTTTGTTGAAGCTGATGATCAGATGGTATAAGTTCTAATTTCATATACTCAATTAAACGTGTTTTTAATCCTACAAGAATCATTCTCATATTCCAATTGTTTTCAGGTCGTTGGTGTTGCAGCTAGTAGTCCCACTAAGACTCAAAATATTGGTAAGTTATTGTTATTTGGGATTATTTATTTATTTGAAGTATTTTGATTGTGAAATTTGTGAAAATTAATTATATGTATATTAGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCGAACTTGTGCCATAGGGCATGTGGGACGTGCTGTGCACGTTGCAGCTGTGTGCCGCCGGGCACTTCCGGAAACTATGAGGCTTGCCCTTGCTACGCTACACTGACCACTCACGGCGGCCGGCGAAAGTGTCCTTAAGTTATTTCATTGTTAAAAAAGATACTGTGTTGAAAAGTCCGTCATAATCTCTCCCATGCAAAAGTCTGTATTCTGTTCTGTTTTTGTTCATCGTCATCTTCAACGTTTATAAGCTTTGATTTATAAATAAAAATTTGAAGGAGTTGTTTAATATAATGAATTATTTATCTAAAATAAAATTTCTATATGTCCCCTTTATTTTGTTTGTTTTTCTTTTCCCAGTTATGTGAGTGAATATACAAAACAAATTATGAATTATATTCTTGTACGTTACAAGTGTTGTTTTATTTGTGTGTGTAATAAAGCTACAATTAATTGACCA AGTCGTCTTTCCTTTCTTTCTTTCTTCATCTTAATACCATGGCACTTCCTAAAATCATCGTCTGTCTTCTTGCGTCCTCTCTTCTCGTTCTTTGTTTTGTTGAAGCTGATGATCAGATGGTCGTTGGTGTTGCAGCTAGTAGTCCCACTAAGACTCAAAATATTGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCGAACTTGTGCCATAGGGCATGTGGGACGTGCTGTGCACGTTGCAGCTGTGTGCCGCCGGGCACTTCCGGAAACTATGAGGCTTGCCCTTGCTACGCTACACTGACCACTCACGGCGGCCGGCGAAAGTGTCCTTAAGTTATTTCATTGTTAAAAAAGATACTGTGTTGAAAAGTCCGTCATAATCTCTCCCATGCAAAAGTCTGTATTCTGTTCTGTTTTTGTTCATCGTCATCTTCAACGTTTATAAGCTTTGATTTATAAATAAAAATTTGAAGGAGTTGtttaatataatgaattatttatctaaaataaaatttCTATATGTCCCCTTTATTTTGTTTGTTTTTCTTTTCCCAGTTATGTGAGTGAATATACAAAACAAATTATGAATTATATTCTTGTACGTTACAAGTGTTGTTTTATTTGTGTGTGTAATAAAGCTACAATTAATTGACCA ATGGCACTTCCTAAAATCATCGTCTGTCTTCTTGCGTCCTCTCTTCTCGTTCTTTGTTTTGTTGAAGCTGATGATCAGATGGTCGTTGGTGTTGCAGCTAGTAGTCCCACTAAGACTCAAAATATTGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCGAACTTGTGCCATAGGGCATGTGGGACGTGCTGTGCACGTTGCAGCTGTGTGCCGCCGGGCACTTCCGGAAACTATGAGGCTTGCCCTTGCTACGCTACACTGACCACTCACGGCGGCCGGCGAAAGTGTCCTTAA MALPKIIVCLLASSLLVLCFVEADDQMVVGVAASSPTKTQNIDCGGACASRCKLSSRPNLCHRACGTCCARCSCVPPGTSGNYEACPCYATLTTHGGRRKCP*
BLAST of Cucsa.343030 vs. Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-31 Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 1
BLAST of Cucsa.343030 vs. Swiss-Prot
Match: GASAB_ARATH (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana GN=GASA11 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 9.1e-31 Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cucsa.343030 vs. Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=2 SV=2) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-30 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cucsa.343030 vs. Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 8.2e-24 Identity = 55/102 (53.92%), Postives = 61/102 (59.80%), Query Frame = 1
BLAST of Cucsa.343030 vs. Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 8.2e-24 Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 1
BLAST of Cucsa.343030 vs. TrEMBL
Match: A0A0A0LDK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872170 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.2e-55 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of Cucsa.343030 vs. TrEMBL
Match: E1U344_JATCU (Cold-regulated LTCOR12 OS=Jatropha curcas GN=JCGZ_08216 PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33 Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 1
BLAST of Cucsa.343030 vs. TrEMBL
Match: A0A0K0KII1_POPCA (GA-stimulated protein OS=Populus canadensis GN=GASA PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33 Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 1
BLAST of Cucsa.343030 vs. TrEMBL
Match: C9E1T3_JATCU (Gast1-like protein OS=Jatropha curcas PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33 Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 1
BLAST of Cucsa.343030 vs. TrEMBL
Match: B9GQV4_POPTR (GAST-like gene product family protein OS=Populus trichocarpa GN=POPTR_0002s02420g PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.0e-33 Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 1
BLAST of Cucsa.343030 vs. TAIR10
Match: AT2G18420.1 (AT2G18420.1 Gibberellin-regulated family protein) HSP 1 Score: 134.0 bits (336), Expect = 5.1e-32 Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cucsa.343030 vs. TAIR10
Match: AT1G75750.1 (AT1G75750.1 GAST1 protein homolog 1) HSP 1 Score: 133.7 bits (335), Expect = 6.7e-32 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cucsa.343030 vs. TAIR10
Match: AT4G09600.1 (AT4G09600.1 GAST1 protein homolog 3) HSP 1 Score: 110.9 bits (276), Expect = 4.6e-25 Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 1
BLAST of Cucsa.343030 vs. TAIR10
Match: AT4G09610.1 (AT4G09610.1 GAST1 protein homolog 2) HSP 1 Score: 110.9 bits (276), Expect = 4.6e-25 Identity = 55/102 (53.92%), Postives = 61/102 (59.80%), Query Frame = 1
BLAST of Cucsa.343030 vs. TAIR10
Match: AT1G22690.1 (AT1G22690.1 Gibberellin-regulated family protein) HSP 1 Score: 105.1 bits (261), Expect = 2.5e-23 Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of Cucsa.343030 vs. NCBI nr
Match: gi|449437204|ref|XP_004136382.1| (PREDICTED: gibberellin-regulated protein 11 [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 3.1e-55 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of Cucsa.343030 vs. NCBI nr
Match: gi|659132959|ref|XP_008466478.1| (PREDICTED: gibberellin-regulated protein 11-like [Cucumis melo]) HSP 1 Score: 190.7 bits (483), Expect = 1.3e-45 Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 1
BLAST of Cucsa.343030 vs. NCBI nr
Match: gi|1000986114|ref|XP_002510532.2| (PREDICTED: gibberellin-regulated protein 1 [Ricinus communis]) HSP 1 Score: 152.1 bits (383), Expect = 5.2e-34 Identity = 71/106 (66.98%), Postives = 84/106 (79.25%), Query Frame = 1
BLAST of Cucsa.343030 vs. NCBI nr
Match: gi|743903485|ref|XP_011045095.1| (PREDICTED: gibberellin-regulated protein 1-like [Populus euphratica]) HSP 1 Score: 151.4 bits (381), Expect = 8.8e-34 Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 1
BLAST of Cucsa.343030 vs. NCBI nr
Match: gi|643728988|gb|KDP36925.1| (hypothetical protein JCGZ_08216 [Jatropha curcas]) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-33 Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |