Cucsa.301910 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.301910
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionL-lactate dehydrogenase
Locationscaffold02951 : 134020 .. 134307 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGATCTCCAACACGCTGCTGTTTTTCTCCCTCGTACAAACATCAGCGCCTCCACTGATTACTCCATTACTGCTGGATCTGATATGTGTATTGTTACTGATGGTGCTCGGCAGATCGTCGGTGAATCTAGGTTGAATCTGTTGTAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGTCGTTGGTTCAGTTCTCTCCTAAGATGATTCTTTTGATTGTTTCGAATCTGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGT

mRNA sequence

ATGCTAGATCTCCAACACGCTGCTGTTTTTCTCCCTCGTACAAACATCAGCGCCTCCACTGATTACTCCATTACTGCTGGATCTGATATGTGTATTGTTACTGATGGTGCTCGGCAGATCAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGTCGTTGGTTCAGTTCTCTCCTAAGATGATTCTTTTGATTGTTTCGAATCTGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGT

Coding sequence (CDS)

ATGCTAGATCTCCAACACGCTGCTGTTTTTCTCCCTCGTACAAACATCAGCGCCTCCACTGATTACTCCATTACTGCTGGATCTGATATGTGTATTGTTACTGATGGTGCTCGGCAGATCAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGTCGTTGGTTCAGTTCTCTCCTAAGATGATTCTTTTGATTGTTTCGAATCTGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGT

Protein sequence

MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR
Homology
[Close]
BLAST of Cucsa.301910 vs. Swiss-Prot
Match: LDH_MAIZE (L-lactate dehydrogenase OS=Zea mays PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 8.1e-25
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT + + TD S+T GSD+ IVT GARQI          RNVALF+KIV
Sbjct: 83  MLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGARQIQGETRLDLLQRNVALFRKIV 142

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P L + S   +LL+VSN VDVLTYVAWKLSGFP++R
Sbjct: 143 PPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASR 178

[Close]
BLAST of Cucsa.301910 vs. Swiss-Prot
Match: LDHB_HORVU (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-23
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 1 

Query: 2   LDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIVP 61
           LDLQHAA FLPR  I + TD ++T  SD+ +VT GARQI          RNVAL++KIVP
Sbjct: 73  LDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQRNVALYRKIVP 132

Query: 62  SLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
            + + SP  +LL+VSN VDVLTYVAWKLSGFP++R
Sbjct: 133 PVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 167

[Close]
BLAST of Cucsa.301910 vs. Swiss-Prot
Match: LDHA_HORVU (L-lactate dehydrogenase A OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 1 

Query: 2   LDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIVP 61
           LDLQHAA FLPR  IS  TD ++T  SD+ IVT GARQI          RNVAL++KIVP
Sbjct: 86  LDLQHAAAFLPRVRISG-TDAAVTKNSDLVIVTAGARQIPGETRLNLLQRNVALYRKIVP 145

Query: 62  SLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
            + + SP  +LL+VSN VDVLTYVAWKLSGFP++R
Sbjct: 146 PVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 179

[Close]
BLAST of Cucsa.301910 vs. Swiss-Prot
Match: LDH_CAEEL (L-lactate dehydrogenase OS=Caenorhabditis elegans GN=ldh-1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.3e-21
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           M+DLQH   F     + A TDYSITAGS +C+VT GARQ           RNV +F+ I+
Sbjct: 62  MMDLQHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGII 121

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LV++SP   +L+VSN VDVLTYV WKLSG P  R
Sbjct: 122 PQLVKYSPDTCILVVSNPVDVLTYVTWKLSGLPRER 157

[Close]
BLAST of Cucsa.301910 vs. Swiss-Prot
Match: LDHA_RAT (L-lactate dehydrogenase A chain OS=Rattus norvegicus GN=Ldha PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-20
Identity = 51/96 (53.12%), Postives = 68/96 (70.83%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           M+DLQH ++FL    I +S DYS+TA S + I+T GARQ           RNV +F+ I+
Sbjct: 62  MMDLQHGSLFLKTPKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFII 121

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P++V++SP+  LLIVSN VD+LTYVAWK+SGFP NR
Sbjct: 122 PNVVKYSPQCKLLIVSNPVDILTYVAWKISGFPKNR 157

[Close]
BLAST of Cucsa.301910 vs. TrEMBL
Match: A0A0A0KP88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161910 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKM 60
           MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKM
Sbjct: 60  MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKM 119

Query: 61  ILLIVSNLVDVLTYVAWKLSGFPSNR 87
           ILLIVSNLVDVLTYVAWKLSGFPSNR
Sbjct: 120 ILLIVSNLVDVLTYVAWKLSGFPSNR 145

[Close]
BLAST of Cucsa.301910 vs. TrEMBL
Match: A0A0A0KKM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161940 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.7e-32
Identity = 77/96 (80.21%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT ISASTDYSITAGSD+CIVT GARQI          RNVALFQKIV
Sbjct: 79  MLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAGESRLNLLQRNVALFQKIV 138

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LVQFSP+ ILLIVSN VDVLTY+AWKLSGFPSNR
Sbjct: 139 PPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNR 174

[Close]
BLAST of Cucsa.301910 vs. TrEMBL
Match: A0A0L9UPX2_PHAAN (L-lactate dehydrogenase OS=Phaseolus angularis GN=LR48_Vigan06g009900 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.9e-30
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT I ASTDYS+TAGSD+CIVT GARQI          RNV LFQKI+
Sbjct: 54  MLDLQHAAAFLPRTRIQASTDYSVTAGSDLCIVTAGARQIHGESRLNLLQRNVTLFQKII 113

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LV++SP  ILLIVSN VDVLTYVAWKLSGFPSNR
Sbjct: 114 PPLVRYSPDTILLIVSNPVDVLTYVAWKLSGFPSNR 149

[Close]
BLAST of Cucsa.301910 vs. TrEMBL
Match: A0A0S3T5G2_PHAAN (L-lactate dehydrogenase OS=Vigna angularis var. angularis GN=Vigan.10G205800 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.9e-30
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT I ASTDYS+TAGSD+CIVT GARQI          RNV LFQKI+
Sbjct: 81  MLDLQHAAAFLPRTRIQASTDYSVTAGSDLCIVTAGARQIHGESRLNLLQRNVTLFQKII 140

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LV++SP  ILLIVSN VDVLTYVAWKLSGFPSNR
Sbjct: 141 PPLVRYSPDTILLIVSNPVDVLTYVAWKLSGFPSNR 176

[Close]
BLAST of Cucsa.301910 vs. TrEMBL
Match: A0A0A0KKU9_CUCSA (L-lactate dehydrogenase OS=Cucumis sativus GN=Csa_5G161920 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-29
Identity = 75/96 (78.12%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT ISASTDYSITA SD+CIVT GARQI          RNV LFQKIV
Sbjct: 141 MLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAGESRLNLLQRNVTLFQKIV 200

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LVQFSP+ ILLIVSN VDVLTYVAWKLSGF SNR
Sbjct: 201 PLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNR 236

[Close]
BLAST of Cucsa.301910 vs. TAIR10
Match: AT4G17260.1 (AT4G17260.1 Lactate/malate dehydrogenase family protein)

HSP 1 Score: 123.2 bits (308), Expect = 7.6e-29
Identity = 65/96 (67.71%), Postives = 72/96 (75.00%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT I+AS DY +TAGSD+CIVT GARQ           RNVALF+ I+
Sbjct: 82  MLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQNPGESRLNLLQRNVALFRHII 141

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P L + SP  IL+IVSN VDVLTYVAWKLSGFP NR
Sbjct: 142 PPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNR 177

[Close]
BLAST of Cucsa.301910 vs. NCBI nr
Match: gi|700195065|gb|KGN50242.1| (hypothetical protein Csa_5G161910 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKM 60
           MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKM
Sbjct: 60  MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQIRNVALFQKIVPSLVQFSPKM 119

Query: 61  ILLIVSNLVDVLTYVAWKLSGFPSNR 87
           ILLIVSNLVDVLTYVAWKLSGFPSNR
Sbjct: 120 ILLIVSNLVDVLTYVAWKLSGFPSNR 145

[Close]
BLAST of Cucsa.301910 vs. NCBI nr
Match: gi|778700018|ref|XP_004151663.2| (PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-32
Identity = 77/96 (80.21%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT ISASTDYSITAGSD+CIVT GARQI          RNVALFQKIV
Sbjct: 79  MLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAGESRLNLLQRNVALFQKIV 138

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LVQFSP+ ILLIVSN VDVLTY+AWKLSGFPSNR
Sbjct: 139 PPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNR 174

[Close]
BLAST of Cucsa.301910 vs. NCBI nr
Match: gi|700195068|gb|KGN50245.1| (hypothetical protein Csa_5G161940 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-32
Identity = 77/96 (80.21%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT ISASTDYSITAGSD+CIVT GARQI          RNVALFQKIV
Sbjct: 79  MLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAGESRLNLLQRNVALFQKIV 138

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LVQFSP+ ILLIVSN VDVLTY+AWKLSGFPSNR
Sbjct: 139 PPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNR 174

[Close]
BLAST of Cucsa.301910 vs. NCBI nr
Match: gi|659073513|ref|XP_008437100.1| (PREDICTED: L-lactate dehydrogenase B [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 7.6e-31
Identity = 76/96 (79.17%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT ISASTDYS TAGS++CIVT GARQI          RNVALFQKIV
Sbjct: 161 MLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAGESRLNLLQRNVALFQKIV 220

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LVQFSP+ ILLIVSN VDVLTYVAWKLSGFPSNR
Sbjct: 221 PPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNR 256

[Close]
BLAST of Cucsa.301910 vs. NCBI nr
Match: gi|951047968|ref|XP_014519575.1| (PREDICTED: L-lactate dehydrogenase A-like [Vigna radiata var. radiata])

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-30
Identity = 73/96 (76.04%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 1   MLDLQHAAVFLPRTNISASTDYSITAGSDMCIVTDGARQI----------RNVALFQKIV 60
           MLDLQHAA FLPRT I ASTDYSITAGSD+CIVT GARQI          RNV LFQKI+
Sbjct: 79  MLDLQHAAAFLPRTRIQASTDYSITAGSDLCIVTAGARQIHGESRLNLLQRNVTLFQKII 138

Query: 61  PSLVQFSPKMILLIVSNLVDVLTYVAWKLSGFPSNR 87
           P LV++SP  ILLIVSN VDVLTYVAWKLSGFPSNR
Sbjct: 139 PPLVRYSPDTILLIVSNPVDVLTYVAWKLSGFPSNR 174

The following BLAST results are available for this feature:
BLAST of Cucsa.301910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LDH_MAIZE8.1e-2563.54L-lactate dehydrogenase OS=Zea mays PE=2 SV=1[more]
LDHB_HORVU3.4e-2358.95L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1[more]
LDHA_HORVU1.7e-2261.05L-lactate dehydrogenase A OS=Hordeum vulgare PE=1 SV=1[more]
LDH_CAEEL9.3e-2153.13L-lactate dehydrogenase OS=Caenorhabditis elegans GN=ldh-1 PE=2 SV=1[more]
LDHA_RAT1.6e-2053.13L-lactate dehydrogenase A chain OS=Rattus norvegicus GN=Ldha PE=1 SV=1[more]
BLAST of Cucsa.301910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP88_CUCSA1.4e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161910 PE=4 SV=1[more]
A0A0A0KKM5_CUCSA3.7e-3280.21Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161940 PE=4 SV=1[more]
A0A0L9UPX2_PHAAN5.9e-3075.00L-lactate dehydrogenase OS=Phaseolus angularis GN=LR48_Vigan06g009900 PE=3 SV=1[more]
A0A0S3T5G2_PHAAN5.9e-3075.00L-lactate dehydrogenase OS=Vigna angularis var. angularis GN=Vigan.10G205800 PE=... [more]
A0A0A0KKU9_CUCSA1.0e-2978.13L-lactate dehydrogenase OS=Cucumis sativus GN=Csa_5G161920 PE=3 SV=1[more]
BLAST of Cucsa.301910 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17260.17.6e-2967.71 Lactate/malate dehydrogenase family protein[more]
BLAST of Cucsa.301910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195065|gb|KGN50242.1|2.0e-39100.00hypothetical protein Csa_5G161910 [Cucumis sativus][more]
gi|778700018|ref|XP_004151663.2|5.3e-3280.21PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus][more]
gi|700195068|gb|KGN50245.1|5.3e-3280.21hypothetical protein Csa_5G161940 [Cucumis sativus][more]
gi|659073513|ref|XP_008437100.1|7.6e-3179.17PREDICTED: L-lactate dehydrogenase B [Cucumis melo][more]
gi|951047968|ref|XP_014519575.1|6.4e-3076.04PREDICTED: L-lactate dehydrogenase A-like [Vigna radiata var. radiata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001236Lactate/malate_DH_N
IPR001557L-lactate/malate_DH
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0019752carboxylic acid metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006534 cysteine metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019752 carboxylic acid metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004459 L-lactate dehydrogenase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.301910.1Cucsa.301910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001236Lactate/malate dehydrogenase, N-terminalPFAMPF00056Ldh_1_Ncoord: 1..86
score: 1.0
IPR001557L-lactate/malate dehydrogenasePANTHERPTHR11540MALATE AND LACTATE DEHYDROGENASEcoord: 1..86
score: 1.5
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 1..86
score: 6.1
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 1..86
score: 8.45
NoneNo IPR availablePANTHERPTHR11540:SF3L-LACTATE DEHYDROGENASEcoord: 1..86
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.301910Melon (DHL92) v3.6.1cgymedB494
Cucsa.301910Silver-seed gourdcarcgyB1045
Cucsa.301910Cucumber (Chinese Long) v3cgycucB465
Cucsa.301910Cucumber (Chinese Long) v3cgycucB470
Cucsa.301910Watermelon (97103) v2cgywmbB520
Cucsa.301910Watermelon (97103) v2cgywmbB521
Cucsa.301910Wax gourdcgywgoB604
Cucsa.301910Cucumber (Gy14) v1cgycgyB141
Cucsa.301910Cucurbita maxima (Rimu)cgycmaB0830
Cucsa.301910Cucurbita maxima (Rimu)cgycmaB0835
Cucsa.301910Cucurbita maxima (Rimu)cgycmaB0839
Cucsa.301910Cucurbita moschata (Rifu)cgycmoB0824
Cucsa.301910Cucurbita moschata (Rifu)cgycmoB0830
Cucsa.301910Cucurbita moschata (Rifu)cgycmoB0834
Cucsa.301910Wild cucumber (PI 183967)cgycpiB452
Cucsa.301910Wild cucumber (PI 183967)cgycpiB457
Cucsa.301910Cucumber (Chinese Long) v2cgycuB434
Cucsa.301910Cucumber (Chinese Long) v2cgycuB429
Cucsa.301910Melon (DHL92) v3.5.1cgymeB495
Cucsa.301910Melon (DHL92) v3.5.1cgymeB498
Cucsa.301910Watermelon (Charleston Gray)cgywcgB519
Cucsa.301910Watermelon (Charleston Gray)cgywcgB520
Cucsa.301910Watermelon (97103) v1cgywmB547
Cucsa.301910Watermelon (97103) v1cgywmB552
Cucsa.301910Cucurbita pepo (Zucchini)cgycpeB0789
Cucsa.301910Cucurbita pepo (Zucchini)cgycpeB0794
Cucsa.301910Cucurbita pepo (Zucchini)cgycpeB0796
Cucsa.301910Bottle gourd (USVL1VR-Ls)cgylsiB487
Cucsa.301910Bottle gourd (USVL1VR-Ls)cgylsiB491