Cucsa.291800 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCAAATTGGGATCCTTTGTGCAGCTGGACTTGTTGCTATCAAAGAGAATGTTCAAAAACTTGAAGCTGATCATAAGAAGGCTAAGCAACTAGCTAGTAATTAACATCACTCTTTCACTATAATTCTTATCAACATTACCAATTACTATACTGATCCTCTTTTTTtAATATTTTTCTTGGGATTAATATAGGTGGGTTATTCCAAATCAAAGGATTAAAGATTGATCCAAAATCAGTTGAGACAAACATTGTAAGTATCTCTAAACAATAATTGAAAATTGTAGTGATTTTTATCATCTTTGTGTTTGAATTGATTTTTTTGTTTCTTTTGATTAAAAGGGTTTAAAAATAGATTTTAAAACTTATGTTTGATTTTAATGTCAATATTTTGTACAGTTAATATGAACCGAACTTATATAGATAAAAGATTATTCGCTCTCTCGATATTTAAGGAGTGCGTTCAAAACTCTTGAGATGCATTCAATATAGAGTAAACGAATGCGTGAGAATCTCAAGATGCTATATTATCTTACATTACGACAATACAAAAACAGTAAACGAATACTTACTCAATGAGAATTTAGTGATATTCATCAAACAATCTTCCCCTAATAGATTACAAAATGAACTATTTACTTAATTGTCTAGACCAAAACTTCAAAATTTATCAATGTTAGGTCCAAAACTTTCAAAAGTGTTAAATGAATCTCTAAACTTTTTAGGTTGGGTTTCGTTGAGCATGAACCGTGTCGATATTGTATCTAATAACTTCTTAAAAGATTTAAAATTCTTCTAAATTAATTCAATCTCTTTTAGATAAAAAATAAATTTTGTGTTTAACGTCGGAGAACTTTCAATTTTGTGTTAAAGAAATGTTTTGATTATAAAATATTAAAGCTCATACATAAGGGATGCTCATGAATATAACAATTAGATTCAAAATATACATATATGACAATATTTTtAAAAAaGTTGCAAATATAGCAAAATATGTCAAAAAGTCTATTAATGATTGAAGTTTATCAACTATAGAAGTCTACATTGACAGACTTTGCAATATTTGCATTTTTTTAAAAACGTTGTTGTACACTTAATTATTATTCTTAAAATTGCTACACCAATTATAATCATCCCATAAACAAATGTGTAAGTTTGAGTACAAATCTCAACGTTTAGAAAAAAaCGAATTGTAAACTATAGTAAATAAAATTACATATAGTTAGATCAAAGTTAATTTTCATAAATATAACAAAACATCAAAATATTTACAGTCCATGTATAAAAAaCAAAAAaCCCTTGACCGGACTTTTTTTtAAAATATTTCATATTTTCCATATTTTTTTttCTCTTCTTCTTCTAATTTTtCTTTTCCTCTCCATCATTTTTCTTATCTTCTTCCACAAATTTTGTTTCATATTTTTTTTtAAATCATGATATTTTTTCAAAGTATTTTTtGGTTCAAGATTGTATATCAAATATAAAAGATCTCGAAAAAAATTCGATGAAATATTGGTATACGATCGTTTAGATTTTCGTGCACCAAAAAATCTTTAAAATATTGTTTAGATTTGAAACGGTTGCGTAGCCAAGGTTTAATCACTTGGTGTGAGACATTTTTATgAAaGGTATTCATATGTTGGTGAGTTTTATTTTAATACTTAAATTACAAAATTAAAAAaaaTATTTCTTTATTATTATTATTATTATTTTGAAATTATTTATAGTTATTTAGTTTGTCATATATTATCAGATATTGTTTGAAATAGAAGACGATTACGGAATCTCAATGGAAACATTATGTAAAAGCTTGGAAGAACGTGGCATTTTTGTGATGCTACAAACCCAAACAAGGTCTATTCTCAAATTAAAATTCTACTTTTCATTATATATTATTCTTTTTCGTCAAATGTTTGATTAGGAAACATTTTTAATATTTTTTtAAACCATAAAGGTAGAACAAAATCTCACTTATTTCTTATAGCATATATTTTTCACTTGCACGTTTATACGCTAAAATCTCATTTTTCTCGATTCTTAAAGGTGTTATTCTTTGAAAAGTATGAAAGAACATTTTATCTTAGAGCTATTTTTAAAAATACTATTTATGTGTTTTTACTAATTACAATTTATATTAAAAAATATGAACAAATATATACAATATATAAGATTCTAAAAAAAaTCAATTAACTTTATGAATTGTTTTTAAATATAACAACGTGAATCAAAATATTTATAAATATAACAAAATATTATAGCCTTTTTCTAATTTGTTATACTTTTTTACATTTATAATAGCTTCAACAATTATGTTAAAATATTTTTtATTTTTtCGTTAATTTAAAATTTTAGACTAAAAAACCAAACAAAATTGCCAAAATAACACATTTTATATTTTTCTTCGTTTTGAAAGGAAGTGTGCATGAAAACAAAAGTTTTAGCTAAGAAAAGACAGATGTTTATCCAAAACAATTCAATCTGGCTTCAACAACGAGTGAGTTTCAATAACTTTTGAAATAGTGAAATATTTTAATTAATAGGAAAAATATTTTCAAAAATCTTTTAAAAATGATTGTAACATCCGAAAAGAGAAAAAAATACGTGTAATAAGATATCACAATCTATTTACGATGAACTGTGTGGTAGATCAAGATAGACTATTATCTCTATTTATGGAGCAATAGTATGAAAACAATAAATTCAATAGGTTATTGTATTTAGTTATTTATTAAACAAAGTTGAATTGCAGGGCTAGAATTGTTTTTCATCATCAAATTTCAACGAGTGATGTGCAGTATaTTTTATCTTGCTTTCAGGTGATCTTCCAATTAGGTCTATTTTtCTTTTTCAATAAAAATATATACGAATTATTTTAGATATAGCAAAATGAATCAAAGTATTTATAAAATATAATAAAATTTTAGATTTTATCAGTGACAGATGTCGATAGACTTCTATCAATTTATTTTATTATCTATCAATCATATTGATAGAAATTCATCGGTGATAAAATCTAAAATTTGGTTATATTTATAGAGTAATTTTTCAAAACTATATTATTGTTACAAATATATAAATGTAACATATGACAAAGAGTTGAAAGTTTATTAACTTTTTTGAAGTTTATATAAGAACTGGCAATAAGTTTTCACAATTCTCCACCAAATTGTTGATTAAACTAACATAAACCTTTTTCCCTTTGGCTTTTGCAGCAAACTCTAAATGGAATTAAAGTTGTAAATGGCAACTAATTGATCTCATAAGTAACTGTTTCTCTCTCTCCCTAATAAACAAAGTGGAAGTTACCCACTTTGGCATATATGCTTAATACGCCATTTTCTTTGTTGTATAAAACATTTCTAATCTCTATATTGGGCTATAGTATATCATATTCTCCA ATGAGGCAAATTGGGATCCTTTGTGCAGCTGGACTTGTTGCTATCAAAGAGAATGTTCAAAAACTTGAAGCTGATCATAAGAAGGCTAAGCAACTAGCTAGTGGGTTATTCCAAATCAAAGGATTAAAGATTGATCCAAAATCAGTTGAGACAAACATTATATTGTTTGAAATAGAAGACGATTACGGAATCTCAATGGAAACATTATGTAAAAGCTTGGAAGAACGTGGCATTTTTGTGATGCTACAAACCCAAACAAGGGCTAGAATTGTTTTTCATCATCAAATTTCAACGAGTGATGTGCAGTATATTTTATCTTGCTTTCAGCAAACTCTAAATGGAATTAAAGTTGTAAATGGCAACTAATTGATCTCATAAGTAACTGTTTCTCTCTCTCCCTAATAAACAAAGTGGAAGTTACCCACTTTGGCATATATGCTTAATACGCCATTTTCTTTGTTGTATAAAACATTTCTAATCTCTATATTGGGCTATAGTATATCATATTCTCCA ATGAGGCAAATTGGGATCCTTTGTGCAGCTGGACTTGTTGCTATCAAAGAGAATGTTCAAAAACTTGAAGCTGATCATAAGAAGGCTAAGCAACTAGCTAGTGGGTTATTCCAAATCAAAGGATTAAAGATTGATCCAAAATCAGTTGAGACAAACATTATATTGTTTGAAATAGAAGACGATTACGGAATCTCAATGGAAACATTATGTAAAAGCTTGGAAGAACGTGGCATTTTTGTGATGCTACAAACCCAAACAAGGGCTAGAATTGTTTTTCATCATCAAATTTCAACGAGTGATGTGCAGTATaTTTTATCTTGCTTTCAGCAAACTCTAAATGGAATTAAAGTTGTAAATGGCAACTAA MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSDVQYILSCFQQTLNGIKVVNGN*
BLAST of Cucsa.291800 vs. Swiss-Prot
Match: THA1_ARATH (Probable low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana GN=THA1 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29 Identity = 63/112 (56.25%), Postives = 85/112 (75.89%), Query Frame = 1
BLAST of Cucsa.291800 vs. Swiss-Prot
Match: THA2_ARATH (Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana GN=THA2 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27 Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Cucsa.291800 vs. Swiss-Prot
Match: LTAA_AERJA (L-allo-threonine aldolase OS=Aeromonas jandaei GN=ltaA PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11 Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 1
BLAST of Cucsa.291800 vs. TrEMBL
Match: A0A0A0M3F6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G681120 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 4.5e-60 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of Cucsa.291800 vs. TrEMBL
Match: V7BMK3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G105400g PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 9.5e-34 Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1
BLAST of Cucsa.291800 vs. TrEMBL
Match: W9RHK9_9ROSA (L-allo-threonine aldolase OS=Morus notabilis GN=L484_024514 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 1
BLAST of Cucsa.291800 vs. TrEMBL
Match: A0A0B2RGN7_GLYSO (L-allo-threonine aldolase OS=Glycine soja GN=glysoja_035606 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.8e-33 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 1
BLAST of Cucsa.291800 vs. TrEMBL
Match: I1JRS5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G250800 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.8e-33 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 1
BLAST of Cucsa.291800 vs. TAIR10
Match: AT1G08630.1 (AT1G08630.1 threonine aldolase 1) HSP 1 Score: 130.2 bits (326), Expect = 8.8e-31 Identity = 63/112 (56.25%), Postives = 85/112 (75.89%), Query Frame = 1
BLAST of Cucsa.291800 vs. TAIR10
Match: AT3G04520.1 (AT3G04520.1 threonine aldolase 2) HSP 1 Score: 123.6 bits (309), Expect = 8.2e-29 Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Cucsa.291800 vs. NCBI nr
Match: gi|778664314|ref|XP_011660269.1| (PREDICTED: probable low-specificity L-threonine aldolase 1 [Cucumis sativus]) HSP 1 Score: 238.4 bits (607), Expect = 6.5e-60 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of Cucsa.291800 vs. NCBI nr
Match: gi|700211670|gb|KGN66766.1| (hypothetical protein Csa_1G681120 [Cucumis sativus]) HSP 1 Score: 238.4 bits (607), Expect = 6.5e-60 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of Cucsa.291800 vs. NCBI nr
Match: gi|659107426|ref|XP_008453666.1| (PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 223.0 bits (567), Expect = 2.8e-55 Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 1
BLAST of Cucsa.291800 vs. NCBI nr
Match: gi|659107428|ref|XP_008453667.1| (PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X2 [Cucumis melo]) HSP 1 Score: 223.0 bits (567), Expect = 2.8e-55 Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 1
BLAST of Cucsa.291800 vs. NCBI nr
Match: gi|778664311|ref|XP_004142582.2| (PREDICTED: probable low-specificity L-threonine aldolase 1 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38 Identity = 85/115 (73.91%), Postives = 98/115 (85.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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