Cucsa.240240 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TACCTCGACTTACGAAAGAAAATTATAGCAGCTGGTGTATTCGAATGAAAGTTCTACTTGGTTCACAAGATGTGTGAGACATTGTTAATAATGGTTATGAAGAACCAAAAAGTGATACAACTTTGAGTCAAACTCAACGAGAAAGTTTACAAAATACAAAGAAAAGAGATCAAAAGGCTCTCACCATCATTCATCAAGTCATTGATGATTCAAATTTTGAGAAAATTTCTGGAGCAACTACTGCACATCAAACATGAAATTTTTTGGAGAAAACATATAAAGGAGTAGATCGAGTCAAGAAGATTTGCCTTCAAAAATTGAGAGGTAATTATGAATCACTGCATATGAAAGAGTCTGAATCGGTTTCATATTATACTTTAAGATTGTTAGCAGTAGTAAATGAAATGAAAAGATATGGTGAGACAATAAGTGATGAGCAAGTAGTAGACAAGATACTTCGATCATTGGATGAAAAATTCAATTTCATTGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAAAAAAGATTCTTAAGAACAAGCAGACGACTGAGCAACTTTTTCAGTCAAAGTTGAATTTCAAAGACAAAGAAGACAACCTAGAAAAAGGCAATCTTGTATGA tacctcgacttacgaaagaaaattatagcagctggtgtattcgaatgaaagttctacttggttcacaagatgttgatacaactttgagtcaaactcaacgagaaagtttacaaaatacaaagaaaagagatcaaaaggctctcaccatcattcatcaaaaaacatataaaggagtagatcgagtcaagaagatttgccttcaaaaattgagaggtaattatgaatcactgcatatgaaagagtctgaatcggtttcatattatactttaagattgttagcagtagtaaatgaaatgaaaagatatggtgagacaataagtgatgagcaagtagtagacaagatacttcgatcattggatgaaaaattcaatttcattgttgtagctattgaagaatcaaaggatttgagtacaatgtccattgatcaacttatgggttctttacaagcccatgaaaaaaagattcttaagaacaagcagacgactgagcaactttttcagtcaaagttgaatttcaaagacaaagaagacaacctagaaaaaggcaatcttgtatga TACCTCGACTTACGAAAGAAAATTATAGCAGCTGGTGTATTCGAATGAAAGTTCTACTTGGTTCACAAGATGTTGATACAACTTTGAGTCAAACTCAACGAGAAAGTTTACAAAATACAAAGAAAAGAGATCAAAAGGCTCTCACCATCATTCATCAAAAAACATATAAAGGAGTAGATCGAGTCAAGAAGATTTGCCTTCAAAAATTGAGAGGTAATTATGAATCACTGCATATGAAAGAGTCTGAATCGGTTTCATATTATACTTTAAGATTGTTAGCAGTAGTAAATGAAATGAAAAGATATGGTGAGACAATAAGTGATGAGCAAGTAGTAGACAAGATACTTCGATCATTGGATGAAAAATTCAATTTCATTGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAAAAAAGATTCTTAAGAACAAGCAGACGACTGAGCAACTTTTTCAGTCAAAGTTGAATTTCAAAGACAAAGAAGACAACCTAGAAAAAGGCAATCTTGTATGA PRLTKENYSSWCIRMKVLLGSQDVDTTLSQTQRESLQNTKKRDQKALTIIHQKTYKGVDRVKKICLQKLRGNYESLHMKESESVSYYTLRLLAVVNEMKRYGETISDEQVVDKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEKKILKNKQTTEQLFQSKLNFKDKEDNLEKGNLV*
BLAST of Cucsa.240240 vs. TrEMBL
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_033991 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.6e-38 Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 1
BLAST of Cucsa.240240 vs. TrEMBL
Match: A0A151R357_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_041812 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.6e-38 Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 1
BLAST of Cucsa.240240 vs. TrEMBL
Match: A0A151TPU3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_022691 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.6e-38 Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 1
BLAST of Cucsa.240240 vs. TrEMBL
Match: C0JJI1_SOYBN (Truncated copia-type polyprotein OS=Glycine max PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 7.4e-38 Identity = 91/178 (51.12%), Postives = 126/178 (70.79%), Query Frame = 1
BLAST of Cucsa.240240 vs. TrEMBL
Match: A0A0S3SYB8_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.09G144000 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.8e-37 Identity = 91/213 (42.72%), Postives = 132/213 (61.97%), Query Frame = 1
BLAST of Cucsa.240240 vs. TAIR10
Match: AT1G48720.1 (AT1G48720.1 unknown protein) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 1
BLAST of Cucsa.240240 vs. NCBI nr
Match: gi|659112423|ref|XP_008456214.1| (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial [Cucumis melo]) HSP 1 Score: 283.5 bits (724), Expect = 2.7e-73 Identity = 157/220 (71.36%), Postives = 169/220 (76.82%), Query Frame = 1
BLAST of Cucsa.240240 vs. NCBI nr
Match: gi|672198831|ref|XP_008777443.1| (PREDICTED: uncharacterized protein LOC103697381 [Phoenix dactylifera]) HSP 1 Score: 212.2 bits (539), Expect = 7.5e-52 Identity = 109/201 (54.23%), Postives = 143/201 (71.14%), Query Frame = 1
BLAST of Cucsa.240240 vs. NCBI nr
Match: gi|672201192|ref|XP_008778073.1| (PREDICTED: uncharacterized protein LOC103697910 [Phoenix dactylifera]) HSP 1 Score: 211.8 bits (538), Expect = 9.9e-52 Identity = 110/218 (50.46%), Postives = 150/218 (68.81%), Query Frame = 1
BLAST of Cucsa.240240 vs. NCBI nr
Match: gi|778708543|ref|XP_011656230.1| (PREDICTED: uncharacterized protein LOC105435682 [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 6.0e-49 Identity = 107/127 (84.25%), Postives = 115/127 (90.55%), Query Frame = 1
BLAST of Cucsa.240240 vs. NCBI nr
Match: gi|659092965|ref|XP_008447316.1| (PREDICTED: uncharacterized protein LOC103489787 [Cucumis melo]) HSP 1 Score: 199.9 bits (507), Expect = 3.9e-48 Identity = 105/129 (81.40%), Postives = 114/129 (88.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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