Cucsa.234280 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACTGAAGAAGACGATCTCGATCTTCTCCTTTCTCTCCAAGATAAAGTCCTTGAAACTCCTCCTGGAACTCCGCCTCATACCTCAGGTTCGACTCTAAGTTCATCAACTATGGTGATCAATCACTTCTTTGTTTCTTCTTCTTCTTCTTCTCCTCATCGTTTCCCCCCCTGGTAATTCATATTCCATTGTTTCAATATGTAGATGAATCAATGTAGTTTCCATAATCAATGTATGTTGATTTTTCTTCCAGAAGAAAACATTTGTAATGAAGATATGTTTTGGACGGAATTGTTTTCTATGTTGCAGACCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCGGCGGATATGTCTATCTTTAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCGACTGAAAAAAATGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGTACTGTGTGGTGATTTGCGTTACAGAAGAACTGTGCGTACTCTGTTCTTGAATTTGTACCGGGATAATTTATGGTTCGTCTCAGTCCTATGTGAAGGTTTTAGGGAACTTAGAACTCAATTATCAGGGAAGCTATTCTATTAAGCGTATTAGATGTGTTTTTCCTTACTTTTATTCTCTTTTGATATCAGGAATCAAGTTGTAGCACCTGCAGAGCTTCGTGATCGTTTTTCTGATATTCGCTTTGTTCGTTTGTCAACCATAAAGTAGGTTCACTTCACATCTTTTTATTTTTGTTTGACTGACTTGAATTCGTGGCGCTTTAAACAACCAAATACGGAATTTTTGCTGTTAGTGAAATGTGTATAAATGTGTGCAGTACTTTGTTGATTTTGTAACAATTTTTGTTGGCTTTACTTGCTTACTATCAAGGAGAATGATGGTCATGCTCTATTAGATCAACGATTATATTTTTCCTCATGTGAAATAAGAGAATATAACGACAATGATTTCTTTTATTAAGATTGATATGATATTATTCTGGTTAATCTTAACACGAACTCCATCAACATTGAAGGGATCGATTGTAATGGTGTTTCACATTTTTAAAGGCAAGATAGTCGACTGAATTTCTCAAGCGCAAATAACTATATCTCTAAAGTCTATGTATCATTGTATTTGTAACATCATAAAGATGCATTTGACTTTTTCATTAATCTTCAATGGTGTCATGCGGTTTGTTGGGGGTTTTTACATGCTTCAGGACTTAACTCCATTAAAACCTAGCACCAGTTTTCTATTCATTCGGGGACAAACTCTCTCTAAGATCATTTTGTAAATACAAAAGTCTCGGATATACATTTCAATTGCAATTATAAGAAATGTGATATTTACATAAAGAACATAGAAAGTAACTACGAAAATTTGTGTACACGTACTTAAAAATGACTATTCATTTTTTCGAAGATATTAAATATATATATGTAAAAGGATTAAAGGGATTTCTTAAACTTCATTGAGATTTACTAAATACATATGAAGTCTATCAGGAACGGCATTTTTAGTTTTGGAAATAGATTTTGTTAACTTCAATTTTGGATAAGATTTGAGAAACAAGTTCAATTGTTCGTTAAATTTTCAGGAATATGTTGATCGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAGACAAGCTCTACTGGGAAAGCTTACTGCATCTGGAAACTTAGTTGTTTGGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCCCTTTTTAACTCTACAGTACGAAAGGATGCAACGGTACAAACTATAAAATTCTTCTGTTCAGTGATACATGTGTTGTAGTTCTTGAATTACCTACTTCCATTTCTTATTTCAGGGCATGGGATTTTCTTTAAGTGTTTATCAACCAAACCAGTTGTTAATGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGGATGGGATTGCTTGTACAGCAGTAATAAATAGGTTTGTCATTAAAAAATTTCAGTTACCTTGTATATTAGCTCCTGATATGATTGAATGTGACTCCGAATACCTACGTGCAAAAAGGAGTTATATGAGTGGACAGGAACTGAGGGCCGATGAAACTTCTTGGCAATTTTGTGATCCATTAGACTAAACGTTTACACTATTGATTGAACAACTACCCAATGTGTCAAAAGCATATATACCTGGATCAGCCTATCTTAGATGGGATTTTCCTTTTATTGATAAATGGGACAATCAATTCATTGTTGGATTAGTCCTTTGGCTAGAATAACTTTAACATAATATTTTTTAAAAAGTTATGAGCCAGATCTTATAATCAAGGGAACTATTTGATACGGTCTTTCTGGGTTCATTGATACTTTGTCTTTAAAGATACTTATAATACTAACCTTACAGTTGGCATGTTCGAAGTGGTTTTCCCCCTAATTTTGTTTTGGCCTGAACATGATTATTTTTGTGATCAAATTTGTCAAAACCCATATTATAGTTGTTGGTAATATAAACTGCATTTTCCCATACAATAAGACTATCTGTTCATTAGCTAAATATCTGGGTCTAACTTGCCTATGTCCATGTGGATTGTGGACTGCCATATTGTCTTCAGTTTATCATTCATCGAGGTCTTAATATAATAGCATTCACAAGTTGTGTCTTGTTGAGCTTAGTAAAATGCGAAACTTGGGTCTGTTATCTCTTCATAATTCTTTTATTGTTATTATTATTATTATTTTTGAAATCTCATAATTCTTTTATTTCTTTACTACATATGGCAATCTTCTTTAGGGATTCTTGTTTACAAAGTCAATAGTGCATGTAGTATAAGGGGTCTATTTCTCATGTTTTCATAGTTTTTGCAATTCAAAATTTGGAAATTCTGATTGAATATTTTGTTACTACAGGCGACGTGGTATATACTGTAAATACCACAAATCAGTAAGTCAATGTTCTCGATATGGTAATCTTGTTGTGAATGCGTATTTTGAAAACACATCTAACTGATGCATTGCTTCTTTCTATTGTTTTCTTACAGAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGTAAGGGAGCAATGACACGATCATGATATTACTTTCTTTCATACTCCATCCTTCTTCTTTCTTATTTGTTTCATTTACGGGCACAGGAATCTGAGGACTGCATTCAGAGATTATCATCATAAGCCAGAGGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAACACAGCCGATTAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGGTTTGTACAAGACATAGCATTTCATTCATAATTTATTTTAATAAAAGCAATTTCGGAGGAATTAAAAGATTTTAAATAAGTGGGGGGATGTTATCTTGATTTCACGACTATGGGTAAATCCAAAATAGTTGCAACACTTCACCCTATATGGTTAGGTAGATTCTACTCTCTTTATTTCAGTTTCAAATTATTTATCGTTTCATTTTAATGGTTAAACAAATTCCAATATGATTTCCTTCTACATATTGAATTAACGCCTATAACAATCTCTCTTACTCTTGAACTATAGACTTCGAATTTTTCATTCAGAATATGAACTTGGTGGGTTGGACTAAAAATATGGGAAAGAATTATGTACTTCCAAGTTTAACACTTGATCATTATCTTGAATTTTAATTGCGGGTCATTTTGAATATCCCTTGTATTATTTGTACTGCAGCATTCTAAAAAAAGATGTTTTCTGCATTTTCCATCCTTCTTTTGTTAGAATAGAACTTAAGCGGATTTATGAATGGAATTAGAGTATGAGTGGTCATTCATCTGTAGACCATATGTCCTCTTGGGTTCATTTGTATTGAGTCACAAGCCATTTGACTCTATTTTAGTGTAGTTTTCCATTTTCAAACATTGATCTTCAACAAACGGACAAACTAAACGGATTCTTGAATGCTTAACAAGTAATTATTTTGTTGTGTTCTTTGTTTTCGGCTGATTTACTCTATCCACGTGAACAGCAATGCAGATAAAGTAACCACCAACGCACACTCGCAAGGGAAAAGATTCCTCGCTGAGATAACAGGTTAGAGATCTTAACCTTTACGTTGCATTATCCGAAGATTTATACTTCTCTTGAAACTTCTCCCAATTGCAGGGAAATTGACTAGCCAAAGTGTAAATAAAGAATCAACCAAAAGAAGTCAGCAGAGAATCAATTCAGAAAAGACATCAATTTTGTAAGATTCTACTCATTAACTTATTGTTCTTCCATTGCCGTCTTTTCACGCCATTAGCGAACTACATGATATCTTTCAGGAAGTCGACAGTTGAAAACCAACAACCAGACCCAAAAAGAAAGAAAACTGACCATACTCCGGCAAACAAAACCACTAAAGATATCGGGAAGATGATAGAGTTAGATTATGTTAGCTCAGAAGATGACGATGATGATATCAACCTTATATTCGGCAGATAAATTAATTAAAGTTAGAGCTTTACAACCAGAGCTAATCTAATAATGATCAAGTCTCGACGACTATAGTTTAAAAGGAATC ATGGGCACTGAAGAAGACGATCTCGATCTTCTCCTTTCTCTCCAAGATAAAGTCCTTGAAACTCCTCCTGGAACTCCGCCTCATACCTCAGACCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCGGCGGATATGTCTATCTTTAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCGACTGAAAAAAATGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATATGTTGATCGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAGACAAGCTCTACTGGGAAAGCTTACTGCATCTGGAAACTTAGTTGTTTGGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCCCTTTTTAACTCTACAGTACGAAAGGATGCAACGGGCATGGGATTTTCTTTAAGTGTTTATCAACCAAACCAGTTGTTAATGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGGATGGGATTGCTTGTACAGCAGTAATAAATAGGCGACGTGGTATATACTGTAAATACCACAAATCAAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCATAAGCCAGAGGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAACACAGCCGATTAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGATAAAGTAACCACCAACGCACACTCGCAAGGGAAAAGATTCCTCGCTGAGATAACAGGGAAATTGACTAGCCAAAGTGTAAATAAAGAATCAACCAAAAGAAGTCAGCAGAGAATCAATTCAGAAAAGACATCAATTTTGAAGTCGACAGTTGAAAACCAACAACCAGACCCAAAAAGAAAGAAAACTGACCATACTCCGGCAAACAAAACCACTAAAGATATCGGGAAGATGATAGAGTTAGATTATGTTAGCTCAGAAGATGACGATGATGATATCAACCTTATATTCGGCAGATAAATTAATTAAAGTTAGAGCTTTACAACCAGAGCTAATCTAATAATGATCAAGTCTCGACGACTATAGTTTAAAAGGAATC ATGGGCACTGAAGAAGACGATCTCGATCTTCTCCTTTCTCTCCAAGATAAAGTCCTTGAAACTCCTCCTGGAACTCCGCCTCATACCTCAGACCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCGGCGGATATGTCTATCTTTAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCGACTGAAAAAAATGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATATGTTGATCGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAGACAAGCTCTACTGGGAAAGCTTACTGCATCTGGAAACTTAGTTGTTTGGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCCCTTTTTAACTCTACAGTACGAAAGGATGCAACGGGCATGGGATTTTCTTTAAGTGTTTATCAACCAAACCAGTTGTTAATGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGGATGGGATTGCTTGTACAGCAGTAATAAATAGGCGACGTGGTATATACTGTAAATACCACAAATCAAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCATAAGCCAGAGGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAACACAGCCGATTAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGATAAAGTAACCACCAACGCACACTCGCAAGGGAAAAGATTCCTCGCTGAGATAACAGGGAAATTGACTAGCCAAAGTGTAAATAAAGAATCAACCAAAAGAAGTCAGCAGAGAATCAATTCAGAAAAGACATCAATTTTGAAGTCGACAGTTGAAAACCAACAACCAGACCCAAAAAGAAAGAAAACTGACCATACTCCGGCAAACAAAACCACTAAAGATATCGGGAAGATGATAGAGTTAGATTATGTTAGCTCAGAAGATGACGATGATGATATCAACCTTATATTCGGCAGATAA MGTEEDDLDLLLSLQDKVLETPPGTPPHTSDLLSDDESPRRAGPADMSIFRNAVKDCLDYDHIPTEKNGKTNRSKASNDVSIEKFSGLRMRNMLIGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENTVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDATGMGFSLSVYQPNQLLMMGTSDDYGVCKGKKDGIACTAVINRRRGIYCKYHKSKASEKYSTTTRTELKGGNLRTAFRDYHHKPEGVYMVDPLAGKVTSKKPTQPIKLLSVEGLKRALSNADKVTTNAHSQGKRFLAEITGKLTSQSVNKESTKRSQQRINSEKTSILKSTVENQQPDPKRKKTDHTPANKTTKDIGKMIELDYVSSEDDDDDINLIFGR*
BLAST of Cucsa.234280 vs. Swiss-Prot
Match: MCM10_MOUSE (Protein MCM10 homolog OS=Mus musculus GN=Mcm10 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.2e-20 Identity = 69/208 (33.17%), Postives = 104/208 (50.00%), Query Frame = 1
BLAST of Cucsa.234280 vs. Swiss-Prot
Match: MCM10_XENTR (Protein MCM10 homolog OS=Xenopus tropicalis GN=mcm10 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 9.4e-20 Identity = 65/188 (34.57%), Postives = 94/188 (50.00%), Query Frame = 1
BLAST of Cucsa.234280 vs. Swiss-Prot
Match: MCM10_XENLA (Protein MCM10 homolog OS=Xenopus laevis GN=mcm10 PE=1 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 6.1e-19 Identity = 65/196 (33.16%), Postives = 96/196 (48.98%), Query Frame = 1
BLAST of Cucsa.234280 vs. Swiss-Prot
Match: MCM10_DANRE (Protein MCM10 homolog OS=Danio rerio GN=mcm10 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18 Identity = 66/197 (33.50%), Postives = 99/197 (50.25%), Query Frame = 1
BLAST of Cucsa.234280 vs. Swiss-Prot
Match: MCM10_HUMAN (Protein MCM10 homolog OS=Homo sapiens GN=MCM10 PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 3.3e-17 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
BLAST of Cucsa.234280 vs. TrEMBL
Match: A0A0A0LMD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270740 PE=4 SV=1) HSP 1 Score: 769.6 bits (1986), Expect = 1.8e-219 Identity = 388/413 (93.95%), Postives = 388/413 (93.95%), Query Frame = 1
BLAST of Cucsa.234280 vs. TrEMBL
Match: B9HR62_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s13690g PE=4 SV=2) HSP 1 Score: 448.4 bits (1152), Expect = 9.2e-123 Identity = 244/414 (58.94%), Postives = 296/414 (71.50%), Query Frame = 1
BLAST of Cucsa.234280 vs. TrEMBL
Match: A0A067KCU8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18816 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 1.6e-119 Identity = 238/442 (53.85%), Postives = 299/442 (67.65%), Query Frame = 1
BLAST of Cucsa.234280 vs. TrEMBL
Match: M5W7I7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018723mg PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 8.0e-119 Identity = 236/411 (57.42%), Postives = 286/411 (69.59%), Query Frame = 1
BLAST of Cucsa.234280 vs. TrEMBL
Match: A0A067FXW9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015213mg PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 3.1e-118 Identity = 240/415 (57.83%), Postives = 286/415 (68.92%), Query Frame = 1
BLAST of Cucsa.234280 vs. TAIR10
Match: AT2G20980.1 (AT2G20980.1 minichromosome maintenance 10) HSP 1 Score: 383.6 bits (984), Expect = 1.4e-106 Identity = 211/407 (51.84%), Postives = 273/407 (67.08%), Query Frame = 1
BLAST of Cucsa.234280 vs. NCBI nr
Match: gi|449458612|ref|XP_004147041.1| (PREDICTED: uncharacterized protein LOC101219022 [Cucumis sativus]) HSP 1 Score: 769.6 bits (1986), Expect = 2.6e-219 Identity = 388/413 (93.95%), Postives = 388/413 (93.95%), Query Frame = 1
BLAST of Cucsa.234280 vs. NCBI nr
Match: gi|700206813|gb|KGN61932.1| (hypothetical protein Csa_2G270740 [Cucumis sativus]) HSP 1 Score: 769.6 bits (1986), Expect = 2.6e-219 Identity = 388/413 (93.95%), Postives = 388/413 (93.95%), Query Frame = 1
BLAST of Cucsa.234280 vs. NCBI nr
Match: gi|659115699|ref|XP_008457688.1| (PREDICTED: protein MCM10 homolog isoform X3 [Cucumis melo]) HSP 1 Score: 721.5 bits (1861), Expect = 8.0e-205 Identity = 364/413 (88.14%), Postives = 376/413 (91.04%), Query Frame = 1
BLAST of Cucsa.234280 vs. NCBI nr
Match: gi|659115697|ref|XP_008457687.1| (PREDICTED: protein MCM10 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 562.0 bits (1447), Expect = 8.2e-157 Identity = 279/301 (92.69%), Postives = 289/301 (96.01%), Query Frame = 1
BLAST of Cucsa.234280 vs. NCBI nr
Match: gi|659115697|ref|XP_008457687.1| (PREDICTED: protein MCM10 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 184.1 bits (466), Expect = 4.6e-43 Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 1
HSP 2 Score: 562.0 bits (1447), Expect = 8.2e-157 Identity = 279/301 (92.69%), Postives = 289/301 (96.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |