Cucsa.164330 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GTATGGAGCGATTGTAATGGATGATCAGAATAGTGATGGCAGTATAGGATATACAGTACTGCACAATTGTTCTTGTCAGCATTCTGCCCCAACCTTTATCAATATAGTGGACGCTGCAATTCTAAGGCTTGCTACTGGTGACCAGAATATGACTATTCAAACACGAAATCACCCTCTCCCCATGACAAAAAGCCAGCGCTTGCAACGACATGTATGTGATTTTTTCCTCTGA GTATGGAGCGATTGTAATGGATGATCAGAATAGTGATGGCAGTATAGGATATACAGTACTGCACAATTGTTCTTGTCAGCATTCTGCCCCAACCTTTATCAATATAGTGGACGCTGCAATTCTAAGGCTTGCTACTGGTGACCAGAATATGACTATTCAAACACGAAATCACCCTCTCCCCATGACAAAAAGCCAGCGCTTGCAACGACATGTATGTGATTTTTTCCTCTGA GTATGGAGCGATTGTAATGGATGATCAGAATAGTGATGGCAGTATAGGATATACAGTACTGCACAATTGTTCTTGTCAGCATTCTGCCCCAACCTTTATCAATATAGTGGACGCTGCAATTCTAAGGCTTGCTACTGGTGACCAGAATATGACTATTCAAACACGAAATCACCCTCTCCCCATGACAAAAAGCCAGCGCTTGCAACGACATGTATGTGATTTTTTCCTCTGA YGAIVMDDQNSDGSIGYTVLHNCSCQHSAPTFINIVDAAILRLATGDQNMTIQTRNHPLPMTKSQRLQRHVCDFFL*
BLAST of Cucsa.164330 vs. Swiss-Prot
Match: AB1A_ARATH (ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1 PE=2 SV=2) HSP 1 Score: 115.9 bits (289), Expect = 1.9e-25 Identity = 52/75 (69.33%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of Cucsa.164330 vs. TrEMBL
Match: A0A0A0KZR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G171520 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-33 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. TrEMBL
Match: A0A059DHV3_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_A023392 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.3e-28 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. TrEMBL
Match: A0A067K2P2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21102 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.7e-28 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. TrEMBL
Match: I1JNC2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 132.5 bits (332), Expect = 2.2e-28 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. TrEMBL
Match: A0A0R0KIK5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G136000 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.2e-28 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. TAIR10
Match: AT2G41700.1 (AT2G41700.1 ATP-binding cassette A1) HSP 1 Score: 115.9 bits (289), Expect = 1.1e-26 Identity = 52/75 (69.33%), Postives = 65/75 (86.67%), Query Frame = 1
BLAST of Cucsa.164330 vs. NCBI nr
Match: gi|778692274|ref|XP_011653432.1| (PREDICTED: ABC transporter A family member 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. NCBI nr
Match: gi|700198704|gb|KGN53862.1| (hypothetical protein Csa_4G171520 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. NCBI nr
Match: gi|778692276|ref|XP_011653433.1| (PREDICTED: ABC transporter A family member 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. NCBI nr
Match: gi|778692278|ref|XP_011653434.1| (PREDICTED: ABC transporter A family member 1 isoform X3 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cucsa.164330 vs. NCBI nr
Match: gi|778692282|ref|XP_011653435.1| (PREDICTED: ABC transporter A family member 1 isoform X4 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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